BLASTX nr result

ID: Cimicifuga21_contig00006081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006081
         (1527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   311   4e-82
ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   293   8e-77
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   292   1e-76
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   285   2e-74
ref|NP_001240015.1| uncharacterized protein LOC100817223 precurs...   267   6e-69

>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
            gi|298205266|emb|CBI17325.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  311 bits (796), Expect = 4e-82
 Identities = 170/359 (47%), Positives = 227/359 (63%), Gaps = 6/359 (1%)
 Frame = +3

Query: 90   RAEDIGSIVFFDGPKHQFLRTHPDEGVVETSSMSLSDVGAAISVLLGFXXXXXXXXXXXX 269
            RA   GSI F D P H FLR    +  ++  S+ L +VGAA+SVLLGF            
Sbjct: 23   RAGASGSIFFLDSPTHPFLRPRSSDDAMKVDSVLLPEVGAAVSVLLGFAPSSTLSAASSS 82

Query: 270  KLNEVLSPNPFSRPRAVLMLEVGGVEDQQLLINRLGNAQIGNAIRSKVLFGSAKSEIQLP 449
            KLNE+L PNPF RPR+VLMLEV GVED ++++    NA   +A++    +G+ K+EI LP
Sbjct: 83   KLNEILLPNPFERPRSVLMLEVRGVEDPEVVVEH-DNALFRSALKRDFFYGTDKAEILLP 141

Query: 450  GEDEISVISLDESLGSECDAVCIDKQVQDLASLLGGSY-----EPLSGELSVGLASGSPL 614
            G+D++SV+SLDE L  + +  C DK++ D AS +GG Y     +PL+GEL++ LA G+ L
Sbjct: 142  GDDKVSVVSLDERLSFDSNTNCTDKEISDFASWMGGLYVANALKPLNGELTIPLAGGANL 201

Query: 615  KLHMSKKADMEFVVSIVSLVHNIRRAMEMHGDFSRRVNSPAELIIGSFSGFKALQEKYGH 794
             LHMSKKAD EF+ S++SL+HNI+R +EM  D S  + + AEL+ G F G K L E+YG 
Sbjct: 202  NLHMSKKADTEFIASLLSLIHNIKRVIEMRQDLSGSMQNAAELLTGCFDGIKVLDEQYGP 261

Query: 795  GDVSQQGMELFLTALTKLFVSIQEAYQGQIVGVYFFNGKPDVEFGSISNV-NHRPSSRLL 971
              V+QQG+EL LT L+K+F S+Q AY+GQIVGV  F G P      ++ +   +PS+R L
Sbjct: 262  SGVAQQGVELLLTTLSKMFGSLQVAYKGQIVGVISFTGTPPSSEKMLNVMFTSQPSARWL 321

Query: 972  GEAVNSTQSIIIAEVALVRLTLAWXXXXXXXXXXXXXXXXXVNMPLTRDTLLYSNVKLD 1148
             E  +S     I ++ALVR TLAW                 +NMPLTRDTLLYSNVKLD
Sbjct: 322  AETEDSPDLTAIMKIALVRKTLAWITGIILVASTLLGIYFLLNMPLTRDTLLYSNVKLD 380


>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  293 bits (750), Expect = 8e-77
 Identities = 176/360 (48%), Positives = 226/360 (62%), Gaps = 7/360 (1%)
 Frame = +3

Query: 90   RAEDIGSIVFFDGPKHQFLRTHPDEGVVETSSMSLSDVGAAISVLLGFXXXXXXXXXXXX 269
            +AE  GS+ F D    Q+LRT   + VV+  SMSL +VGAA+SVLLGF            
Sbjct: 23   KAETAGSVFFIDSQTRQYLRTPSPKDVVQ--SMSLREVGAAVSVLLGFAPSDSLSAASSS 80

Query: 270  KLNEVLSPNPFSRPRAVLMLEVGGVEDQQLLINRLGNAQIGNAIRSKVLFGSAKSEIQLP 449
            KLNEVL PNPF+RPRAV MLEV G E+   +  +  NA    A +SK++ GS K+ I+LP
Sbjct: 81   KLNEVLMPNPFNRPRAVFMLEVTGGEEIPSVAEQ-ANAMFNGAFKSKIVLGSDKAGIELP 139

Query: 450  GEDEISVISLDESLGSECDAVCIDKQVQDLASLLGGSY-----EPLSGELSVGLASGSPL 614
            GE E+SV+SLDE L     A   DK++ D AS LGGSY     E  +GEL++ LASG+  
Sbjct: 140  GE-EVSVVSLDEEL-----ADFTDKEISDFASWLGGSYVVDPLEAWNGELAIPLASGATT 193

Query: 615  KLHMSKKADMEFVVSIVSLVHNIRRAMEMHGDFSRRVNSPAELIIGSFSGFKALQEKYGH 794
              HMSKKA+ EF+ S+++L  N RRA+EMH D S+    PAEL+ G F G KAL E+YG 
Sbjct: 194  SFHMSKKANREFIASLLALFRNSRRAVEMHEDLSQSTQPPAELLKGCFDGLKALGEQYGP 253

Query: 795  GDVSQQGMELFLTALTKLFVSIQEAYQGQIVGVYFFNGKPDVEFGSISNV--NHRPSSRL 968
               +Q+G+EL LT L+K+F S+Q AY+GQI GV FFN  P  E  ++ +V    +PS+R 
Sbjct: 254  EGAAQKGLELLLTTLSKMFDSLQTAYKGQIAGVIFFNTAPASESETVLDVMLTSQPSARW 313

Query: 969  LGEAVNSTQSIIIAEVALVRLTLAWXXXXXXXXXXXXXXXXXVNMPLTRDTLLYSNVKLD 1148
            L E   +  +  IAEVALVR+TLAW                 +NMP+TRDTLLYSNVKLD
Sbjct: 314  L-EETKTPSNGTIAEVALVRMTLAWITGIVLIIATLLGIYYLLNMPITRDTLLYSNVKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
            unknown [Populus trichocarpa] gi|222842142|gb|EEE79689.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  292 bits (748), Expect = 1e-76
 Identities = 178/364 (48%), Positives = 224/364 (61%), Gaps = 11/364 (3%)
 Frame = +3

Query: 90   RAEDIGSIVFFDGPKHQFLRTHPDEGVVETSSMSLSDVGAAISVLLGFXXXXXXXXXXXX 269
            +AE  GS++F D    Q+LR+     VV+++SMSL +VGAA+SVLLGF            
Sbjct: 23   KAEISGSVIFIDSQTRQYLRSPSPNDVVQSNSMSLQEVGAAVSVLLGFVPSDALSATSSL 82

Query: 270  KLNEVLSPNPFSRPRAVLMLEVGG----VEDQQLLINRLGNAQIGNAIRSKVLFGSAKSE 437
            KLNEVL PNPF+RPRAV MLEV G    V DQ        N     A +SK++ GS K++
Sbjct: 83   KLNEVLLPNPFNRPRAVFMLEVTGELPSVADQ-------ANVMFNAAYKSKIVPGSNKAD 135

Query: 438  IQLPGEDEISVISLDESLGSECDAVCIDKQVQDLASLLGGSY-----EPLSGELSVGLAS 602
            IQLPGE E+SV+SLDE           DK + D AS LGGSY     E L GEL++ LAS
Sbjct: 136  IQLPGE-EVSVVSLDEEFVD-----FTDKDISDFASWLGGSYAVDPLEALKGELAIPLAS 189

Query: 603  GSPLKLHMSKKADMEFVVSIVSLVHNIRRAMEMHGDFSRRVNSPAELIIGSFSGFKALQE 782
            G+ + LHMSKKA+ EF+ S+++L+ N R+A+EMHGD S     PAEL+ GSF G KALQE
Sbjct: 190  GATIDLHMSKKANREFIASLLALLRNSRKAVEMHGDLSLSNQPPAELLKGSFDGLKALQE 249

Query: 783  KYGHGDVSQQGMELFLTALTKLFVSIQEAYQGQIVGVYFFNGKPDVEFGSISNV--NHRP 956
             YG    +Q+G+EL +T L+K+F S+Q AY+GQIVG   FN  P  E  ++ NV    RP
Sbjct: 250  HYGPEGAAQKGLELLITMLSKMFDSLQAAYKGQIVGAILFNTAPAPESKTLLNVMLTSRP 309

Query: 957  SSRLLGEAVNSTQSIIIAEVALVRLTLAWXXXXXXXXXXXXXXXXXVNMPLTRDTLLYSN 1136
            S+R L E    T    IA VALVR+TLAW                  +MPLT+DTLLYSN
Sbjct: 310  SARWLEETKEPTIE-AIAVVALVRITLAWITGIVLIIATLLGIYFLFSMPLTKDTLLYSN 368

Query: 1137 VKLD 1148
            VKLD
Sbjct: 369  VKLD 372


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
            putative [Ricinus communis]
          Length = 369

 Score =  285 bits (730), Expect = 2e-74
 Identities = 178/359 (49%), Positives = 221/359 (61%), Gaps = 8/359 (2%)
 Frame = +3

Query: 96   EDIGSIVFFDGPKHQFLRTHPDEGVVETSSMSLSDVGAAISVLLGFXXXXXXXXXXXXKL 275
            E  GSI+F DG  HQ+LR      VV++  M+  +VGAA+SVLLGF            KL
Sbjct: 26   ERTGSILFIDGNSHQYLRND----VVQSRLMTPVEVGAAVSVLLGFAPPVTLSAAGSSKL 81

Query: 276  NEVLSPNPFSRPRAVLMLEVGGVEDQQLLINRLGNAQIGNAIRSKVLFGSAKSEIQLPGE 455
            NEVL PNPF RP AV +LEV GV D    +    N    NA + K    S K++I+LPGE
Sbjct: 82   NEVLMPNPFDRPGAVFLLEVTGVND----LVASENVMSSNAFKRKFALDSDKAQIELPGE 137

Query: 456  DEISVISLDESLGSECDAVCIDKQVQDLASLLGGSY-----EPLSGELSVGLASGSPLKL 620
             E+SVISLDE LG        DK++ DL S LGGSY     E L+GEL + LASG+ LKL
Sbjct: 138  -EVSVISLDEKLGD-----FTDKELSDLVSWLGGSYIVNGLESLNGELIIPLASGANLKL 191

Query: 621  HMSKKADMEFVVSIVSLVHNIRRAMEMHGDFSRRVNSPAELIIGSFSGFKALQEKYGHGD 800
            HMSKKAD EF+ S+++L HN +RA+E+H D S+ ++ PAELI+G F G KALQE+YG  +
Sbjct: 192  HMSKKADREFIESLLTLFHNSKRAIELHEDLSQAIHGPAELIMGHFHGIKALQEQYGR-E 250

Query: 801  VSQQGMELFLTALTKLFVSIQEAYQGQIVGVYFFNGKPDVEFGSISNV--NHRPSSRLLG 974
            V QQG+EL +  L+K+  S Q AY+GQIVGV   N +  +E   + NV     PS+R L 
Sbjct: 251  VVQQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERSTLESEKLLNVMFTSWPSARWLA 310

Query: 975  EAVNSTQS-IIIAEVALVRLTLAWXXXXXXXXXXXXXXXXXVNMPLTRDTLLYSNVKLD 1148
            EA  S  +   I EVALVR TLAW                 +NMPLTRDTLLYSNVKLD
Sbjct: 311  EAEGSNATDTAIMEVALVRKTLAWLTGLILLISTLIGIYLLLNMPLTRDTLLYSNVKLD 369


>ref|NP_001240015.1| uncharacterized protein LOC100817223 precursor [Glycine max]
            gi|255647811|gb|ACU24365.1| unknown [Glycine max]
          Length = 369

 Score =  267 bits (682), Expect = 6e-69
 Identities = 164/365 (44%), Positives = 214/365 (58%), Gaps = 12/365 (3%)
 Frame = +3

Query: 90   RAEDIGSIVFFDGPKHQFLRTHPDEGVVETSSMSLSDVGAAISVLLGFXXXXXXXXXXXX 269
            + E  GS+ F D   +QFLR        E  SM L +VGAA+SVLLGF            
Sbjct: 23   KGEASGSVFFVDSSSNQFLRARSSND--EQPSMLLQEVGAAVSVLLGFAPPSTFSAASSS 80

Query: 270  KLNEVLSPNPFSRPRAVLMLEVGGVEDQQLLINRLGNAQIGNAIRSKVLFG--SAKSEIQ 443
            KLNEVL PNPF RPRAV +LEV G       IN LG     N + S   +   S K  IQ
Sbjct: 81   KLNEVLIPNPFKRPRAVFLLEVNG-------INALGKIVQDNPMFSNSFWSTNSDKVGIQ 133

Query: 444  LPGEDEISVISLDESLGSECDAVCIDKQVQDLASLLGGSY-----EPLSGELSVGLASGS 608
            LP E ++SV+SLDE L         DK++ D +SL+GGSY     EPL+G L++ LA+G+
Sbjct: 134  LPDETDVSVVSLDEQLED-----WTDKEISDFSSLIGGSYAPDALEPLNGVLTIPLANGA 188

Query: 609  PLKLHMSKKADMEFVVSIVSLVHNIRRAMEMHGDFSRRVNSPAELIIGSFSGFKALQEKY 788
             + LHMSKKA+ +F+V ++SL HN++RA++MH + S+    PAEL+ G F+G K LQE+Y
Sbjct: 189  SVNLHMSKKAERKFIVGLMSLTHNVQRAIQMHDNLSQSAKGPAELLTGCFNGIKVLQEQY 248

Query: 789  GHGDVSQQGMELFLTALTKLFVSIQEAYQGQIVGVYFFNGKPDVEFGSISNV---NHRPS 959
                ++Q G+EL    +TK+F S+QEAY+GQIVG+ + +     E G   +V    H P 
Sbjct: 249  ETESIAQHGVELLYATMTKIFSSLQEAYKGQIVGIIYCHVATTQESGKKFDVIFTPHHPY 308

Query: 960  SRLLGE--AVNSTQSIIIAEVALVRLTLAWXXXXXXXXXXXXXXXXXVNMPLTRDTLLYS 1133
            +R L E  AVN+T    + EV LVR TLAW                 +NMPLTRDTLLYS
Sbjct: 309  ARWLAETNAVNAT----LPEVVLVRRTLAWVTGIILLISTFMGICYLMNMPLTRDTLLYS 364

Query: 1134 NVKLD 1148
            NVKLD
Sbjct: 365  NVKLD 369


Top