BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006060
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing fac...   124   6e-26
ref|XP_002515364.1| arginine/serine-rich splicing factor, putati...   122   3e-25
gb|AFK40774.1| unknown [Lotus japonicus]                              121   5e-25
ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing fac...   121   5e-25
ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|2...   120   8e-25

>ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus]
          Length = 188

 Score =  124 bits (311), Expect = 6e-26
 Identities = 61/112 (54%), Positives = 67/112 (59%)
 Frame = -1

Query: 1242 MSRVYVGNLEPRITEGQLEDEFRKYGVLRSVWVARRPPGYXXXXXXXXXXXXXXXXXXDG 1063
            M+RVY+GNL+PR+TE  LEDEFR +GVLRSVWVARRPPGY                  DG
Sbjct: 1    MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 1062 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXSELKCYECGEPGHFAREC 907
            KNGWRVELSHN                        +LKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHNSKGGGGGGGRRGRGGGGGGGGGGDDLKCYECGEPGHFAREC 112


>ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223545308|gb|EEF46813.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 179

 Score =  122 bits (305), Expect = 3e-25
 Identities = 63/112 (56%), Positives = 69/112 (61%)
 Frame = -1

Query: 1242 MSRVYVGNLEPRITEGQLEDEFRKYGVLRSVWVARRPPGYXXXXXXXXXXXXXXXXXXDG 1063
            MSRVYVGNL+PR+TE  LEDEFR++GV+RSVWVARRPPGY                  DG
Sbjct: 1    MSRVYVGNLDPRVTERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDG 60

Query: 1062 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXSELKCYECGEPGHFAREC 907
            KNGWRVELSHN                       S+LKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN-------SRGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 105


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  121 bits (303), Expect = 5e-25
 Identities = 63/112 (56%), Positives = 67/112 (59%)
 Frame = -1

Query: 1242 MSRVYVGNLEPRITEGQLEDEFRKYGVLRSVWVARRPPGYXXXXXXXXXXXXXXXXXXDG 1063
            MSRVYVGNL+PR++E  LEDEFR YGVLRSVWVARRPPGY                  DG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 1062 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXSELKCYECGEPGHFAREC 907
            KNGWRVELSHN                        +LKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN-------SKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
            [Vitis vinifera] gi|296083786|emb|CBI24003.3| unnamed
            protein product [Vitis vinifera]
          Length = 181

 Score =  121 bits (303), Expect = 5e-25
 Identities = 63/112 (56%), Positives = 69/112 (61%)
 Frame = -1

Query: 1242 MSRVYVGNLEPRITEGQLEDEFRKYGVLRSVWVARRPPGYXXXXXXXXXXXXXXXXXXDG 1063
            MSRVYVGNL+PR+TE +LEDEFR +GV+RSVWVARRPPGY                  DG
Sbjct: 1    MSRVYVGNLDPRVTERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDG 60

Query: 1062 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXSELKCYECGEPGHFAREC 907
            KNGWRVELSHN                       S+LKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN-----SRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 107


>ref|XP_002330789.1| predicted protein [Populus trichocarpa] gi|222872591|gb|EEF09722.1|
            predicted protein [Populus trichocarpa]
          Length = 187

 Score =  120 bits (301), Expect = 8e-25
 Identities = 62/112 (55%), Positives = 69/112 (61%)
 Frame = -1

Query: 1242 MSRVYVGNLEPRITEGQLEDEFRKYGVLRSVWVARRPPGYXXXXXXXXXXXXXXXXXXDG 1063
            MSRVYVGNL+PR++E  LEDEFR++GV+RSVWVARRPPGY                  DG
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60

Query: 1062 KNGWRVELSHNXXXXXXXXXXXXXXXXXXXXXXXSELKCYECGEPGHFAREC 907
            KNGWRVELSHN                       S+LKCYECGEPGHFAREC
Sbjct: 61   KNGWRVELSHN--SRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFAREC 110