BLASTX nr result

ID: Cimicifuga21_contig00006057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006057
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   166   5e-39
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              164   2e-38
ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent hel...   158   1e-36
ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-l...   158   1e-36
ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   156   4e-36

>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
            vinifera]
          Length = 913

 Score =  166 bits (420), Expect = 5e-39
 Identities = 104/262 (39%), Positives = 146/262 (55%), Gaps = 22/262 (8%)
 Frame = +2

Query: 23   KVRLAPNPHGKLTRTKFEAWKMWHEDGLTLEKIANFPGRAAPIKESTVFDYIVEAAKEGY 202
            K++  PN   KLT  K+EAWKMW EDGL++EK+ANFP R+APIK+ TV +Y++ AA+EG+
Sbjct: 636  KMQPVPNQQRKLTPAKYEAWKMWQEDGLSIEKVANFPSRSAPIKDQTVLEYLLGAAQEGF 695

Query: 203  EINWKRLCEEIDITREIFSSIQGAILKVGSRXXXXXXXXXXXXXVSYPLIKAVLTMQDLG 382
             I+W RLC+E+ +TRE+FS I+ AI KVGSR             +SY  IK  LT+QD G
Sbjct: 696  AIDWTRLCDEVGLTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAHIKVCLTLQDCG 755

Query: 383  LSAEVF------LGPQVELASRTSEP---------LLGP--DQTYYSDVVKSSLNEKEGT 511
            +S EV            EL S+ SE          + GP   +T   +++ S   E E T
Sbjct: 756  MSKEVIPPGNHNTLTADELPSKASEASMDTMHKCLIRGPCEVETSVDNIIASCCLENEVT 815

Query: 512  APSPVTVAEPESIKQPXXXXXXXXXXXXXXXINVTEEKRV----ASEESILELLKNC-NG 676
               P TV   +    P               I+  EE+ +    A+E SIL+LL+N  +G
Sbjct: 816  TSIPFTV---DLDMHPPGVHDEIFSLRKRQKIDEPEEESLIMQEATESSILDLLRNYDDG 872

Query: 677  VSLADIVDQFKGSNQESVVELV 742
            V L+D++  F GS +E VV+L+
Sbjct: 873  VPLSDVLKHFNGSREEYVVDLL 894


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  164 bits (415), Expect = 2e-38
 Identities = 98/245 (40%), Positives = 138/245 (56%), Gaps = 5/245 (2%)
 Frame = +2

Query: 23   KVRLAPNPHGKLTRTKFEAWKMWHEDGLTLEKIANFPGRAAPIKESTVFDYIVEAAKEGY 202
            K++  PN   KLT  K+EAWKMW EDGL++EK+ANFP R+APIK+ TV +Y++ AA+EG+
Sbjct: 711  KMQPVPNQQRKLTPAKYEAWKMWQEDGLSIEKVANFPSRSAPIKDQTVLEYLLGAAQEGF 770

Query: 203  EINWKRLCEEIDITREIFSSIQGAILKVGSRXXXXXXXXXXXXXVSYPLIKAVLTMQDLG 382
             I+W RLC+E+ +TRE+FS I+ AI KVGSR             +SY  IK  LT+QD G
Sbjct: 771  AIDWTRLCDEVGLTREMFSDIEAAITKVGSRDKLKPVKIESPEYISYAHIKVCLTLQDCG 830

Query: 383  LSAEVFLGPQVELASRTSEPLLGPDQTYYSDVVKSSLNEKEGTAPSPVTVAEPESIKQPX 562
            +S EV   P     + T++ L         D +   L     T   P TV   +    P 
Sbjct: 831  MSKEVI--PPGNHNTLTADELPSKASEASMDTMHKCLIRGPFTTSIPFTV---DLDMHPP 885

Query: 563  XXXXXXXXXXXXXXINVTEEKRV----ASEESILELLKNC-NGVSLADIVDQFKGSNQES 727
                          I+  EE+ +    A+E SIL+LL+N  +GV L+D++  F GS +E 
Sbjct: 886  GVHDEIFSLRKRQKIDEPEEESLIMQEATESSILDLLRNYDDGVPLSDVLKHFNGSREEY 945

Query: 728  VVELV 742
            VV+L+
Sbjct: 946  VVDLL 950


>ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis
            sativus]
          Length = 919

 Score =  158 bits (400), Expect = 1e-36
 Identities = 101/246 (41%), Positives = 136/246 (55%), Gaps = 6/246 (2%)
 Frame = +2

Query: 23   KVRLAPNPHGKLTRTKFEAWKMWHEDGLTLEKIANFPGRAAPIKESTVFDYIVEAAKEGY 202
            K+   PN    L   KFEAWKMWHEDGL+++KIANFPGR APIKE+TVF YIV+A +EGY
Sbjct: 675  KLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGY 734

Query: 203  EINWKRLCEEIDITREIFSSIQGAILKVGSRXXXXXXXXXXXXXVSYPLIKAVLTMQDLG 382
            EI+W + C+EI +T +IFS IQ A+ KVGS              ++Y  IKA L MQ  G
Sbjct: 735  EIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRG 794

Query: 383  LSAEVFLGPQVELASRTSEPLLGPDQTYYSDVVKSSLNEKEGTAPSPVTVAEPESIKQPX 562
            +S E        L  +T EP+ G      S    +S+ +KE          EP  I+ P 
Sbjct: 795  MSPE-------GLDRKTDEPMTGASVLSGS---PTSIQKKE----------EPCVIETPS 834

Query: 563  XXXXXXXXXXXXXXI-NVTEEKRV---ASEESILELLKNCNGVSLADIVDQF--KGSNQE 724
                          +  + EE RV   A+E  ++E LKN +GV+L +++ QF  KG  +E
Sbjct: 835  NGEEEISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEE 894

Query: 725  SVVELV 742
            S+V L+
Sbjct: 895  SLVALL 900


>ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
          Length = 906

 Score =  158 bits (400), Expect = 1e-36
 Identities = 101/246 (41%), Positives = 136/246 (55%), Gaps = 6/246 (2%)
 Frame = +2

Query: 23   KVRLAPNPHGKLTRTKFEAWKMWHEDGLTLEKIANFPGRAAPIKESTVFDYIVEAAKEGY 202
            K+   PN    L   KFEAWKMWHEDGL+++KIANFPGR APIKE+TVF YIV+A +EGY
Sbjct: 662  KLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGY 721

Query: 203  EINWKRLCEEIDITREIFSSIQGAILKVGSRXXXXXXXXXXXXXVSYPLIKAVLTMQDLG 382
            EI+W + C+EI +T +IFS IQ A+ KVGS              ++Y  IKA L MQ  G
Sbjct: 722  EIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRG 781

Query: 383  LSAEVFLGPQVELASRTSEPLLGPDQTYYSDVVKSSLNEKEGTAPSPVTVAEPESIKQPX 562
            +S E        L  +T EP+ G      S    +S+ +KE          EP  I+ P 
Sbjct: 782  MSPE-------GLDRKTDEPMTGASVLSGS---PTSIQKKE----------EPCVIETPS 821

Query: 563  XXXXXXXXXXXXXXI-NVTEEKRV---ASEESILELLKNCNGVSLADIVDQF--KGSNQE 724
                          +  + EE RV   A+E  ++E LKN +GV+L +++ QF  KG  +E
Sbjct: 822  NGEEEISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEE 881

Query: 725  SVVELV 742
            S+V L+
Sbjct: 882  SLVALL 887


>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
            gi|223534248|gb|EEF35962.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 795

 Score =  156 bits (395), Expect = 4e-36
 Identities = 100/244 (40%), Positives = 131/244 (53%), Gaps = 4/244 (1%)
 Frame = +2

Query: 23   KVRLAPNPHGKLTRTKFEAWKMWHEDGLTLEKIANFPGRAAPIKESTVFDYIVEAAKEGY 202
            KV   PN    L+  KFEAWKMWHEDGL++ KIAN P R APIK  TV +Y+++AA+EG 
Sbjct: 547  KVCPTPNLQKTLSPAKFEAWKMWHEDGLSIHKIANLPSRQAPIKVETVCEYLLDAAQEGL 606

Query: 203  EINWKRLCEEIDITREIFSSIQGAILKVGSRXXXXXXXXXXXXXVSYPLIKAVLTMQDLG 382
            E +W R C EI +T EIFS IQGAI+KVGSR             VSY  IK  L MQ  G
Sbjct: 607  EFDWIRFCSEIGLTGEIFSDIQGAIIKVGSREKLKPIKNELPEDVSYAHIKTFLAMQTSG 666

Query: 383  LSAEVFLGPQVELASRTSEPLLGPDQTYYSDVVKSSLNEKEGTAPSPVTVAEPESIKQPX 562
            +S E   G Q    S + +           D V++ +        S  TV E + +K   
Sbjct: 667  MSLE---GMQPSHLSPSKD-----------DPVQNKVPANSVEIASLTTVTERKELKPDP 712

Query: 563  XXXXXXXXXXXXXXINVTEEKRV---ASEESILELLKNCN-GVSLADIVDQFKGSNQESV 730
                            +T+       A+E SIL+LLKN + GVSL+DI+  FKGS ++SV
Sbjct: 713  IHDEDLCSPEKRQKTIITDGSSTALEATETSILDLLKNYDEGVSLSDILKHFKGSREDSV 772

Query: 731  VELV 742
            ++L+
Sbjct: 773  IDLL 776


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