BLASTX nr result

ID: Cimicifuga21_contig00006051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006051
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267614.1| PREDICTED: acyl carrier protein 4, chloropla...   188   1e-45
ref|XP_002511107.1| acyl carrier protein, putative [Ricinus comm...   169   9e-40
ref|XP_003525430.1| PREDICTED: acyl carrier protein 4, chloropla...   168   2e-39
ref|XP_003532402.1| PREDICTED: acyl carrier protein 1, chloropla...   167   3e-39
ref|XP_002318163.1| predicted protein [Populus trichocarpa] gi|2...   163   4e-38

>ref|XP_002267614.1| PREDICTED: acyl carrier protein 4, chloroplastic [Vitis vinifera]
           gi|296088168|emb|CBI35660.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  188 bits (477), Expect = 1e-45
 Identities = 100/139 (71%), Positives = 116/139 (83%)
 Frame = -3

Query: 671 ANVSASLVRFNSSLKQFSATTQVSGRTSSLKLISVRWTNKTFPSLRCTGVRVSCSAKPET 492
           A VSA+ V F SSLK   +  Q++G+ SSLK+++V WT   FPSLR +  RVSCSAKPET
Sbjct: 2   AAVSATSVTFGSSLKLLKSR-QITGKASSLKMVTVGWTKSGFPSLRTSRFRVSCSAKPET 60

Query: 491 VAKVCDIVRKQLALPADTELTPESKFAALGADSLDTVEIVMGLEEEFDINVEEESSQNIT 312
           V KVC+IV+KQLALPA++ELTPESKFAALGADSLDTVEIVM LEEEF I+VEEESSQNIT
Sbjct: 61  VQKVCEIVKKQLALPAESELTPESKFAALGADSLDTVEIVMSLEEEFGISVEEESSQNIT 120

Query: 311 TVQEAADMIEKLVEKKPAA 255
           TVQEAAD+IEKLV+K   A
Sbjct: 121 TVQEAADLIEKLVQKNSEA 139


>ref|XP_002511107.1| acyl carrier protein, putative [Ricinus communis]
           gi|223550222|gb|EEF51709.1| acyl carrier protein,
           putative [Ricinus communis]
          Length = 137

 Score =  169 bits (427), Expect = 9e-40
 Identities = 90/136 (66%), Positives = 109/136 (80%)
 Frame = -3

Query: 671 ANVSASLVRFNSSLKQFSATTQVSGRTSSLKLISVRWTNKTFPSLRCTGVRVSCSAKPET 492
           A+VSAS + F   L   + T+ V+GRTSS  ++S  W    FPSL+ +  R+SC+AKPET
Sbjct: 2   ASVSASCLSFQPLLFHSNKTSLVAGRTSS-NMVSGNWAKNGFPSLKASRFRISCAAKPET 60

Query: 491 VAKVCDIVRKQLALPADTELTPESKFAALGADSLDTVEIVMGLEEEFDINVEEESSQNIT 312
           V KVCDIVRKQLAL  + +L+PESKF+ LGADSLDTVEIVM LE+EF+I+VEEESSQNIT
Sbjct: 61  VDKVCDIVRKQLALAPEIKLSPESKFSELGADSLDTVEIVMELEQEFEISVEEESSQNIT 120

Query: 311 TVQEAADMIEKLVEKK 264
           TVQEAAD+IEKLVEKK
Sbjct: 121 TVQEAADLIEKLVEKK 136


>ref|XP_003525430.1| PREDICTED: acyl carrier protein 4, chloroplastic [Glycine max]
          Length = 143

 Score =  168 bits (425), Expect = 2e-39
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 2/141 (1%)
 Frame = -3

Query: 671 ANVSASLVRFNSSLKQFS-ATTQVSGRTSSLKLISVRWTNKTFPSLRCTGVRV-SCSAKP 498
           A+VSA+ +RF   LK  +  TTQ   +TSSL  +SV W  +TFPSLR + +R+ +  A+P
Sbjct: 2   ASVSATSLRFQPFLKLSTRTTTQGCYKTSSLGAVSVGWNRRTFPSLRSSRLRICAVKAQP 61

Query: 497 ETVAKVCDIVRKQLALPADTELTPESKFAALGADSLDTVEIVMGLEEEFDINVEEESSQN 318
           ETV KVCDIVRKQLALPA++ELTP++KF+ALGADSLDTVEIVMGLEEEF I VEE+ SQN
Sbjct: 62  ETVQKVCDIVRKQLALPAESELTPDTKFSALGADSLDTVEIVMGLEEEFGITVEEDGSQN 121

Query: 317 ITTVQEAADMIEKLVEKKPAA 255
           I+TVQEAAD+IEKL++ K  A
Sbjct: 122 ISTVQEAADLIEKLIQDKSGA 142


>ref|XP_003532402.1| PREDICTED: acyl carrier protein 1, chloroplastic-like [Glycine max]
          Length = 142

 Score =  167 bits (423), Expect = 3e-39
 Identities = 89/140 (63%), Positives = 113/140 (80%), Gaps = 1/140 (0%)
 Frame = -3

Query: 671 ANVSASLVRFNSSLKQFSATTQVSGRTSSLKLISVRWTNKTFPSLRCTGVRV-SCSAKPE 495
           A+VSA+ + F  SLK  + T+Q   +TSSL+++SV W  +TFPSLR +   + +  A+PE
Sbjct: 2   ASVSATSLSFQPSLKLSTRTSQGCYKTSSLEVVSVGWNRRTFPSLRSSRFCICAVKAQPE 61

Query: 494 TVAKVCDIVRKQLALPADTELTPESKFAALGADSLDTVEIVMGLEEEFDINVEEESSQNI 315
           TV KVC+IVRKQLALPA++ELTP++KF+ALGADSLDTVEIVMGLEEEF I VEE+ SQNI
Sbjct: 62  TVQKVCNIVRKQLALPAESELTPDTKFSALGADSLDTVEIVMGLEEEFGITVEEDGSQNI 121

Query: 314 TTVQEAADMIEKLVEKKPAA 255
           +TVQEAAD+IEKLV+ K  A
Sbjct: 122 STVQEAADLIEKLVQDKSGA 141


>ref|XP_002318163.1| predicted protein [Populus trichocarpa] gi|222858836|gb|EEE96383.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  163 bits (413), Expect = 4e-38
 Identities = 91/137 (66%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
 Frame = -3

Query: 671 ANVSASLVRFNSSLKQFSATTQVSGRTSSLKLISVRWT-NKTFPSLRCTGVRVSCSAKPE 495
           A VSA+ +RF     Q + ++Q +   +SLK +SV W  N  FPSL+ +  RVSC+AKPE
Sbjct: 2   ATVSATCLRFQPLFSQSNKSSQAA---ASLKPVSVGWAKNNGFPSLKASRFRVSCAAKPE 58

Query: 494 TVAKVCDIVRKQLALPADTELTPESKFAALGADSLDTVEIVMGLEEEFDINVEEESSQNI 315
           TV KV +IVRKQLAL  +TELT ESKFAALGADSLDTVEIVM LEEEFDINVEEE+SQNI
Sbjct: 59  TVEKVIEIVRKQLALTPETELTNESKFAALGADSLDTVEIVMALEEEFDINVEEENSQNI 118

Query: 314 TTVQEAADMIEKLVEKK 264
           TTV+EAADMI+KLV+ K
Sbjct: 119 TTVREAADMIDKLVQDK 135


Top