BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006049
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    99   2e-18
gb|ABA91837.2| retrotransposon protein, putative, unclassified [...    99   2e-18
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    98   4e-18
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    97   6e-18
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   2e-17

>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|62733115|gb|AAX95232.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group]
          Length = 1324

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 57/186 (30%), Positives = 95/186 (51%)
 Frame = +2

Query: 617  QFIMQIISWNCRGCGNPSTVRQIIFLIKKENLAIFFLSETKISAEKMALLNVQFGYPDIC 796
            ++ M+II+WNCRG GN  TVR ++ L K+++  I FLS TK+   K+     + G P++ 
Sbjct: 445  KYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLV 504

Query: 797  SFSTCNKAGGFSLLYKNNLNLEIISICKHIIRTTISSEPDHTSWSASFFYGSPYAPLKEA 976
                  K+GG ++ +K  +NL + ++ +  +   +  E D   W  +  YG P +  K+ 
Sbjct: 505  VKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDV-MEDDGFWWRFTGVYGEPRSDKKDL 563

Query: 977  SWKLLEQQYPGHS*PSLIIGDLNLILHSKEKIGGDQFVLNHVDFAHDFIQQEGLMDLGYS 1156
            +WK L           L +GD N +L S EK  G     + +D     +    L +LG++
Sbjct: 564  TWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFT 623

Query: 1157 GNDFTW 1174
            G+ FTW
Sbjct: 624  GDPFTW 629


>gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1301

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 57/186 (30%), Positives = 95/186 (51%)
 Frame = +2

Query: 617  QFIMQIISWNCRGCGNPSTVRQIIFLIKKENLAIFFLSETKISAEKMALLNVQFGYPDIC 796
            ++ M+II+WNCRG GN  TVR ++ L K+++  I FLS TK+   K+     + G P++ 
Sbjct: 422  KYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLV 481

Query: 797  SFSTCNKAGGFSLLYKNNLNLEIISICKHIIRTTISSEPDHTSWSASFFYGSPYAPLKEA 976
                  K+GG ++ +K  +NL + ++ +  +   +  E D   W  +  YG P +  K+ 
Sbjct: 482  VKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDV-MEDDGFWWRFTGVYGEPRSDKKDL 540

Query: 977  SWKLLEQQYPGHS*PSLIIGDLNLILHSKEKIGGDQFVLNHVDFAHDFIQQEGLMDLGYS 1156
            +WK L           L +GD N +L S EK  G     + +D     +    L +LG++
Sbjct: 541  TWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFT 600

Query: 1157 GNDFTW 1174
            G+ FTW
Sbjct: 601  GDPFTW 606


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
 Frame = +2

Query: 632  IISWNCRGCGNPSTVRQIIFLIKKENLAIFFLSETKISAEKMALLNVQFGYPDI----CS 799
            I+SWNCRG G+PS +  +  L+  EN  I FLSETK+ + +M  +  +  +  +    C 
Sbjct: 4    ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 800  FSTCNKAGGFSLLYKNNLNLEIISICKHIIRTTISSEPDHTSWSASFFYGSPYAPLKEAS 979
                 + GG ++L+++ + ++++S+  + I   +  E     W  +  YG P    K+ +
Sbjct: 64   GECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQG-EWRFTGIYGYPEEEHKDKT 122

Query: 980  WKLLEQQYPGHS*PSLIIGDLNLILHSKEKIGGDQFVLNHVDFAHDFIQQEGLMDLGYSG 1159
              LL         P L  GD NL+L + EK GGD F     D   + +++   MDLG+ G
Sbjct: 123  GALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVG 182

Query: 1160 NDFTW 1174
             +FTW
Sbjct: 183  YEFTW 187


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 54/183 (29%), Positives = 86/183 (46%)
 Frame = +2

Query: 626  MQIISWNCRGCGNPSTVRQIIFLIKKENLAIFFLSETKISAEKMALLNVQFGYPDICSFS 805
            M  ++WNCRG GN +TV+ +  LI+K    + FL ET+ S EKM+ L  +  +      S
Sbjct: 636  MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 806  TCNKAGGFSLLYKNNLNLEIISICKHIIRTTISSEPDHTSWSASFFYGSPYAPLKEASWK 985
            +  K+GG +L +  ++++++  I K  I   +   PD   W  +F YG P    +   W 
Sbjct: 696  SEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMWS 755

Query: 986  LLEQQYPGHS*PSLIIGDLNLILHSKEKIGGDQFVLNHVDFAHDFIQQEGLMDLGYSGND 1165
            LL       + P ++IGD N  L   E    +      +    D +    L DLG+ G  
Sbjct: 756  LLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVP 815

Query: 1166 FTW 1174
             T+
Sbjct: 816  HTY 818


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 56/183 (30%), Positives = 88/183 (48%)
 Frame = +2

Query: 626  MQIISWNCRGCGNPSTVRQIIFLIKKENLAIFFLSETKISAEKMALLNVQFGYPDICSFS 805
            M+++SWNC+G  NP TV  +  L  ++   I F+ ET + ++ +  +  + G+ +    S
Sbjct: 1    MKLLSWNCQGLANPWTVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLS 60

Query: 806  TCNKAGGFSLLYKNNLNLEIISICKHIIRTTISSEPDHTSWSASFFYGSPYAPLKEASWK 985
            +   +GG  L + N +++ + S   H I   +  E  +  W+A   YG P    K  +W 
Sbjct: 61   SNGNSGGMGLWW-NEMDVTVESFSAHHIHAVVLDENKNPIWNAMGIYGWPETSNKHLTWS 119

Query: 986  LLEQQYPGHS*PSLIIGDLNLILHSKEKIGGDQFVLNHVDFAHDFIQQEGLMDLGYSGND 1165
            LL +     S P L  GD N I   +EK GG       +D   + I    + DLGY GN 
Sbjct: 120  LLRRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNR 179

Query: 1166 FTW 1174
            FTW
Sbjct: 180  FTW 182