BLASTX nr result

ID: Cimicifuga21_contig00006027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006027
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284296.1| PREDICTED: LOB domain-containing protein 38 ...   273   5e-71
ref|XP_002525255.1| LOB domain-containing protein, putative [Ric...   266   6e-69
gb|AEI72265.1| hypothetical protein [Citrus trifoliata]               265   1e-68
gb|ABK96782.1| unknown [Populus trichocarpa x Populus deltoides]      265   2e-68
ref|XP_002306497.1| predicted protein [Populus trichocarpa] gi|2...   263   8e-68

>ref|XP_002284296.1| PREDICTED: LOB domain-containing protein 38 [Vitis vinifera]
            gi|296087336|emb|CBI33710.3| unnamed protein product
            [Vitis vinifera]
          Length = 228

 Score =  273 bits (699), Expect = 5e-71
 Identities = 150/237 (63%), Positives = 172/237 (72%), Gaps = 16/237 (6%)
 Frame = -1

Query: 1004 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISGVPENQR 825
            MSCNGCRVLRKGCSESCILRPCLQWIES E+QGHATVFVAKFFGRAGLMSFIS VPENQR
Sbjct: 1    MSCNGCRVLRKGCSESCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISAVPENQR 60

Query: 824  PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETILRGGTLQPMTEVLGGILMP 645
            PALF+SLL+EACGRTVNPVNGAVGLL TGNWH+CQAA+ET+LRGGTL+ M E+L G+  P
Sbjct: 61   PALFRSLLYEACGRTVNPVNGAVGLLGTGNWHVCQAAMETVLRGGTLRAMPELLNGVSTP 120

Query: 644  EADDVSEVVAGC----------RNDRSKAMKRKGIENVNKIHPTDLDLSLTSGCLRKVSK 495
            E D+ SE    C           + RSK  KRK +E  +K+  TDLDL LT G   K+S 
Sbjct: 121  ECDEASEAEVTCTDMFKLRDPNSSSRSKVPKRKRLEEASKVQCTDLDLRLTPGLTGKISS 180

Query: 494  NG----SF--EKQRCTTPSMYSSEESVTTSFDSGCGFGRDHHNNRCVGEQQLLNLFV 342
             G    S+  E +R  TPSM +SEESVTT+      F   H      GE++LLNLF+
Sbjct: 181  RGLGAMSYLPETRRPGTPSM-NSEESVTTTC-----FETPHSPE---GERKLLNLFL 228


>ref|XP_002525255.1| LOB domain-containing protein, putative [Ricinus communis]
            gi|223535413|gb|EEF37083.1| LOB domain-containing
            protein, putative [Ricinus communis]
          Length = 246

 Score =  266 bits (681), Expect = 6e-69
 Identities = 155/251 (61%), Positives = 170/251 (67%), Gaps = 30/251 (11%)
 Frame = -1

Query: 1004 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISGVPENQR 825
            MSCNGCRVLRKGCSE+CILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFIS VPE QR
Sbjct: 1    MSCNGCRVLRKGCSETCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPETQR 60

Query: 824  PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETILRGGTLQPMTEVLGGIL-M 648
            PALFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAVET+LRGGTL+PM E+L G    
Sbjct: 61   PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLAGSSPS 120

Query: 647  PEADDVSEVVAGC---------------RNDRSKAM-KRKGIEN-----VNK-------- 555
            P +D+ SE    C                N RSK+  KRK I N     +NK        
Sbjct: 121  PASDETSEAEVTCTDMWKLQDPNPHSRFSNSRSKSSPKRKRINNNETLTINKQQLPKPLY 180

Query: 554  IHPTDLDLSLTSGCLRKVSKNGSFEKQRCTTPSMYSSEESVTTSFDSGCGFGRDHHNNRC 375
            +   DLDL LT     K S     E +R  TPSM S E   TT FDS  GFG  + N   
Sbjct: 181  LPSNDLDLRLTPSFSPKNSPRKP-ELRRPGTPSMNSEESVTTTCFDS--GFGDQYGNGG- 236

Query: 374  VGEQQLLNLFV 342
             G+++LLNLFV
Sbjct: 237  -GDRKLLNLFV 246


>gb|AEI72265.1| hypothetical protein [Citrus trifoliata]
          Length = 239

 Score =  265 bits (678), Expect = 1e-68
 Identities = 144/244 (59%), Positives = 169/244 (69%), Gaps = 24/244 (9%)
 Frame = -1

Query: 1004 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISGVPENQR 825
            MSCNGCRVLRKGCSESCILRPCLQWIESPE+QGHATVFVAKFFGRAGLMSFIS VPE+QR
Sbjct: 1    MSCNGCRVLRKGCSESCILRPCLQWIESPESQGHATVFVAKFFGRAGLMSFISAVPESQR 60

Query: 824  PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETILRGGTLQPMTEVL---GGI 654
            PALFQSLL+EACGRTVNPVNGAVGLLWTGNWH+CQAAVET+LRGGTL+P+ E+L   GG 
Sbjct: 61   PALFQSLLYEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVLELLSSCGGS 120

Query: 653  LMPEADDVSEVVAGC---------------------RNDRSKAMKRKGIENVNKIHPTDL 537
              P +D++SE    C                     R+  S A +++  E+  K+  +DL
Sbjct: 121  PTPTSDELSEAEVTCTDMSRLQDRSFPSSHCRFSSSRSKVSPAKRKRVEESAMKLQQSDL 180

Query: 536  DLSLTSGCLRKVSKNGSFEKQRCTTPSMYSSEESVTTSFDSGCGFGRDHHNNRCVGEQQL 357
            DL LT     KV  +    ++R  TPSM S E   TT F+SG     DH +     E++L
Sbjct: 181  DLRLTPRFTGKVPPD---VRRRPGTPSMNSEESGTTTCFESGL---TDHRHLNGAEERKL 234

Query: 356  LNLF 345
            LNLF
Sbjct: 235  LNLF 238


>gb|ABK96782.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 242

 Score =  265 bits (677), Expect = 2e-68
 Identities = 157/251 (62%), Positives = 175/251 (69%), Gaps = 30/251 (11%)
 Frame = -1

Query: 1004 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISGVPENQR 825
            MSCNGCRVLRKGCSE+CILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFIS VPE+QR
Sbjct: 1    MSCNGCRVLRKGCSENCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISSVPEDQR 60

Query: 824  PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETILRGGTLQPMTEVLGG---- 657
            P+LFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAVET+LRGGTL+PM ++L G    
Sbjct: 61   PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPDLLTGGGSP 120

Query: 656  ILMPEADDVSEVVAGC-------------------RNDRSK-AMKRKGIEN---VNKIHP 546
               P +D+ SE    C                    N RS+ + KRKG E    VN  H 
Sbjct: 121  SSSPPSDEASEFEVACTDIWKLQDPNPNPIHHSRFSNSRSRVSSKRKGTEEPMVVNMRH- 179

Query: 545  TDLDLSLTSGCLRKVSKNGSFEKQRCTTPSMYSSEESVTTS---FDSGCGFGRDHHNNRC 375
             DLDL LTS      S+ G  E  R  TPSM +SEESVTT+   FDS  GFG  + N   
Sbjct: 180  NDLDLLLTS----STSQKGFAEICRPGTPSM-NSEESVTTNATCFDS-AGFGDQYGNGG- 232

Query: 374  VGEQQLLNLFV 342
             GE +LLNLF+
Sbjct: 233  -GETKLLNLFL 242


>ref|XP_002306497.1| predicted protein [Populus trichocarpa] gi|222855946|gb|EEE93493.1|
            predicted protein [Populus trichocarpa]
          Length = 242

 Score =  263 bits (671), Expect = 8e-68
 Identities = 156/251 (62%), Positives = 174/251 (69%), Gaps = 30/251 (11%)
 Frame = -1

Query: 1004 MSCNGCRVLRKGCSESCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISGVPENQR 825
            MSCNGCRVLRKGCSE+CILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFIS VPE+QR
Sbjct: 1    MSCNGCRVLRKGCSENCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISSVPEDQR 60

Query: 824  PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQAAVETILRGGTLQPMTEVLGG---- 657
            P+LFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAVET+LRGGTL+PM ++L G    
Sbjct: 61   PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPDLLTGGGSP 120

Query: 656  ILMPEADDVSEVVAGC-------------------RNDRSK-AMKRKGIEN---VNKIHP 546
               P +D+ SE    C                    N RS+ + KRKG E    VN  H 
Sbjct: 121  SSSPPSDEASEFEVACTDIWKLQDPNPNPIHHSRFSNSRSRVSSKRKGTEEPMVVNMRH- 179

Query: 545  TDLDLSLTSGCLRKVSKNGSFEKQRCTTPSMYSSEESVTTS---FDSGCGFGRDHHNNRC 375
             DLDL LT       S+ G  E  R  TPSM +SEESVTT+   FDS  GFG  + N   
Sbjct: 180  DDLDLLLTP----STSQKGFAEICRPGTPSM-NSEESVTTNATCFDS-AGFGDQYGNGG- 232

Query: 374  VGEQQLLNLFV 342
             GE +LLNLF+
Sbjct: 233  -GETKLLNLFL 242


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