BLASTX nr result

ID: Cimicifuga21_contig00006015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006015
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   135   3e-30
ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [M...   134   1e-29
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   133   1e-29
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              133   1e-29

>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/66 (95%), Positives = 66/66 (100%)
 Frame = +3

Query: 39  ILMSATLNAELFSNYFGGAPTIHIPGFTHPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 218
           ILMSATLNAELFSNYFGGAPTIHIPGFT+PVRAHFLEDVLEMTGYKLTSFNQIDDYGQ+K
Sbjct: 311 ILMSATLNAELFSNYFGGAPTIHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEK 370

Query: 219 LWKTQR 236
           +WKTQR
Sbjct: 371 MWKTQR 376


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +3

Query: 39  ILMSATLNAELFSNYFGGAPTIHIPGFTHPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 218
           ILMSATLNAELFSNYFGGAP IHIPGFT+PVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK
Sbjct: 385 ILMSATLNAELFSNYFGGAPKIHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 444

Query: 219 LWKTQR 236
           +WKTQR
Sbjct: 445 MWKTQR 450


>ref|XP_003638253.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
           gi|355504188|gb|AES85391.1| ATP-dependent RNA helicase
           A-like protein [Medicago truncatula]
          Length = 268

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/66 (90%), Positives = 65/66 (98%)
 Frame = +3

Query: 39  ILMSATLNAELFSNYFGGAPTIHIPGFTHPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 218
           +LMSATLNAELFSNYFGGAPT HIPGFT+PVRAHFLEDVLEMTGYK+TSFNQ+DDYGQDK
Sbjct: 165 VLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKVTSFNQVDDYGQDK 224

Query: 219 LWKTQR 236
           LWKTQ+
Sbjct: 225 LWKTQK 230


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/66 (90%), Positives = 65/66 (98%)
 Frame = +3

Query: 39  ILMSATLNAELFSNYFGGAPTIHIPGFTHPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 218
           +LMSATLNAELFSNYFGGAPT HIPGFT+PVRAHFLED+LEMTGYKLTSFNQIDDYGQ+K
Sbjct: 416 VLMSATLNAELFSNYFGGAPTFHIPGFTYPVRAHFLEDILEMTGYKLTSFNQIDDYGQEK 475

Query: 219 LWKTQR 236
           LWKTQ+
Sbjct: 476 LWKTQK 481


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/66 (92%), Positives = 66/66 (100%)
 Frame = +3

Query: 39  ILMSATLNAELFSNYFGGAPTIHIPGFTHPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDK 218
           ILMSATLNAELFSN+FGGAPTIHIPGFT+PVRAHFLEDVLEMTGYKLTSFNQIDDYGQ+K
Sbjct: 391 ILMSATLNAELFSNFFGGAPTIHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEK 450

Query: 219 LWKTQR 236
           +WKTQ+
Sbjct: 451 MWKTQK 456


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