BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006007
         (2400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266577.2| PREDICTED: ZF-HD homeobox protein At4g24660-...   263   1e-67
emb|CAN72985.1| hypothetical protein VITISV_009036 [Vitis vinifera]   256   3e-65
ref|XP_002327798.1| predicted protein [Populus trichocarpa] gi|2...   230   1e-57
ref|XP_002281371.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   228   4e-57
ref|XP_004152776.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   225   4e-56

>ref|XP_002266577.2| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 345

 Score =  263 bits (673), Expect = 1e-67
 Identities = 143/259 (55%), Positives = 168/259 (64%), Gaps = 5/259 (1%)
 Frame = -3

Query: 1057 IAVAGVVTSAPIAGGSNPRTPTGRIE-----VSSTRYRECLKNHAASIGGHVVDGCGEFM 893
            IAV+G  T+ PI GGSNP+             +S RYRECLKNHAAS+GGHV DGCGEFM
Sbjct: 94   IAVSGA-TATPITGGSNPKVAAAPPHPPPQSAASIRYRECLKNHAASMGGHVFDGCGEFM 152

Query: 892  PGGEEGTPEALKCAACECHRNFHRKESDGEPQSGANYYYCYNPNSKANGSRSRXXXXXXX 713
            P GEEGT EALKCAAC+CHRNFHRKE DGE Q  AN YY  NPN+ ++  R+        
Sbjct: 153  PSGEEGTLEALKCAACDCHRNFHRKEIDGESQPTANCYYTCNPNTNSS-RRNTIAPQLPP 211

Query: 712  XXXXXXXXXQHQKFPIGLPTSPPSGVIPPMMMTFXXXXXXXXXXXXXXSEEFNVFHTNAG 533
                     QH K+  GL  SP    IPPMMM F              SE+ N+F +N G
Sbjct: 212  SHAPLPHLHQHHKYSHGLSGSPLMSPIPPMMMAF---GGGGGAPAESSSEDLNMFQSNVG 268

Query: 532  SGXXXXXXQYSSLSKKRFRTKFSKEQKDKMLEFAEKVGWRMQKQDEPAVQQFCNEVGVKR 353
                       +LSKKRFRTKFS+EQKDKM EFAEK+GW++QKQ+E  VQQFC++VGVKR
Sbjct: 269  MHLQPQPAF--ALSKKRFRTKFSQEQKDKMQEFAEKLGWKIQKQEEQEVQQFCSDVGVKR 326

Query: 352  QVLKVWMHNNKHSLKKKEL 296
            QV KVWMHNNK ++KKK+L
Sbjct: 327  QVFKVWMHNNKQAMKKKQL 345


>emb|CAN72985.1| hypothetical protein VITISV_009036 [Vitis vinifera]
          Length = 250

 Score =  256 bits (653), Expect = 3e-65
 Identities = 141/254 (55%), Positives = 162/254 (63%), Gaps = 7/254 (2%)
 Frame = -3

Query: 1036 TSAPIAGGSNPRTPTGRIE-----VSSTRYRECLKNHAASIGGHVVDGCGEFMPGGEEGT 872
            T+ PI GGSNP+             +S RYRECLKNHAAS+GGHV DGCGEFMP GEEGT
Sbjct: 5    TATPITGGSNPKVAAAPPHPPPQSAASIRYRECLKNHAASMGGHVFDGCGEFMPSGEEGT 64

Query: 871  PEALKCAACECHRNFHRKESDGEPQSGANYYYCYNPNSKANGSRSRXXXXXXXXXXXXXX 692
             EALKCAAC+CHRNFHRKE DGE Q  AN YY  NPN+  N SR R              
Sbjct: 65   LEALKCAACDCHRNFHRKEIDGESQPTANCYYTCNPNT--NSSR-RNTIAPQLPPSHAPL 121

Query: 691  XXQHQ--KFPIGLPTSPPSGVIPPMMMTFXXXXXXXXXXXXXXSEEFNVFHTNAGSGXXX 518
               HQ  K+  GL  SP    IPPMMM F              SE+ N+F +N G     
Sbjct: 122  PHLHQXHKYSHGLSGSPLMSPIPPMMMAF---GGGGGAPAESSSEDLNMFQSNVGMHLQP 178

Query: 517  XXXQYSSLSKKRFRTKFSKEQKDKMLEFAEKVGWRMQKQDEPAVQQFCNEVGVKRQVLKV 338
                  +LSKKRFRTKFS+EQKDKM EFAEK+GW++Q Q+E  VQQFC++VGVKRQV KV
Sbjct: 179  QPAF--ALSKKRFRTKFSQEQKDKMQEFAEKLGWKIQXQEEQEVQQFCSDVGVKRQVFKV 236

Query: 337  WMHNNKHSLKKKEL 296
            WMHNNK ++KKK+L
Sbjct: 237  WMHNNKQAMKKKQL 250


>ref|XP_002327798.1| predicted protein [Populus trichocarpa] gi|222836883|gb|EEE75276.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  230 bits (587), Expect = 1e-57
 Identities = 127/256 (49%), Positives = 153/256 (59%), Gaps = 3/256 (1%)
 Frame = -3

Query: 1057 IAVAGVVTSAPIAGGS---NPRTPTGRIEVSSTRYRECLKNHAASIGGHVVDGCGEFMPG 887
            +A      +AP    S   +P  P      +S RYRECLKNHAAS+GGHV+DGCGEFMPG
Sbjct: 94   VATTSATNTAPTPSRSISRSPPPPPTSASSASIRYRECLKNHAASMGGHVLDGCGEFMPG 153

Query: 886  GEEGTPEALKCAACECHRNFHRKESDGEPQSGANYYYCYNPNSKANGSRSRXXXXXXXXX 707
            GEEGTPE  KCAACECHR+FHR+E DG PQ  AN     N N K N              
Sbjct: 154  GEEGTPETFKCAACECHRSFHRREIDGAPQCVANSTCYKNSNGKRNILPLPQQLVTSHAP 213

Query: 706  XXXXXXXQHQKFPIGLPTSPPSGVIPPMMMTFXXXXXXXXXXXXXXSEEFNVFHTNAGSG 527
                    HQ++  G   S  +  I PMMM+F              SE+ N++     S 
Sbjct: 214  PQSASLHPHQRYHHG-TLSTYTTPIAPMMMSF----GGGGAAAESSSEDLNMYQ----SD 264

Query: 526  XXXXXXQYSSLSKKRFRTKFSKEQKDKMLEFAEKVGWRMQKQDEPAVQQFCNEVGVKRQV 347
                      +SKKRFRT+FS+EQKDKM+EFAEK+GWR+QKQDE  VQQFC++VGVKR+V
Sbjct: 265  LQGQSSAQPLISKKRFRTRFSEEQKDKMMEFAEKLGWRIQKQDEQEVQQFCSQVGVKRKV 324

Query: 346  LKVWMHNNKHSLKKKE 299
             KVWMHNNK S+KKK+
Sbjct: 325  FKVWMHNNKQSMKKKQ 340


>ref|XP_002281371.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 316

 Score =  228 bits (582), Expect = 4e-57
 Identities = 132/256 (51%), Positives = 155/256 (60%), Gaps = 4/256 (1%)
 Frame = -3

Query: 1057 IAVAGVVTSAPIA---GGSNPRTPTGRIEVSSTRYRECLKNHAASIGGHVVDGCGEFMPG 887
            + VAGV+  A IA   GGSN +        +S RYRECLKNHAA+IGG+VVDGCGEFMP 
Sbjct: 80   VHVAGVLAGATIASTIGGSNSK--------ASVRYRECLKNHAANIGGNVVDGCGEFMPD 131

Query: 886  GEEGTPEALKCAACECHRNFHRKESDGEPQSGANYYYCYNPNSKANGSRSRXXXXXXXXX 707
            GEEGT EAL CAAC CHRNFHRKE DGE    +  ++   P + A+              
Sbjct: 132  GEEGTLEALMCAACNCHRNFHRKEVDGETIGRSAPHFHPLPPTLAS-------------- 177

Query: 706  XXXXXXXQHQKFPIGLPTSPPSGVIPPMMMTFXXXXXXXXXXXXXXSEEFNVFHTNAGSG 527
                     QKFP      P + +IPPM M F               E+   F +NAG+ 
Sbjct: 178  ---PPYLHRQKFPKAFHAPPSTIIIPPMSMAFGTSIGATESSS----EDLRAFDSNAGAA 230

Query: 526  XXXXXXQY-SSLSKKRFRTKFSKEQKDKMLEFAEKVGWRMQKQDEPAVQQFCNEVGVKRQ 350
                     SSLSKKRFRTKF++EQK+KMLE+AEKVGWRMQKQ E  VQQ C EVGVKRQ
Sbjct: 231  PPPPPPPPPSSLSKKRFRTKFTQEQKEKMLEYAEKVGWRMQKQYEEQVQQLCAEVGVKRQ 290

Query: 349  VLKVWMHNNKHSLKKK 302
            V KVWMHNNK++LKK+
Sbjct: 291  VFKVWMHNNKNTLKKQ 306


>ref|XP_004152776.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
          Length = 276

 Score =  225 bits (574), Expect = 4e-56
 Identities = 127/252 (50%), Positives = 151/252 (59%), Gaps = 5/252 (1%)
 Frame = -3

Query: 1042 VVTSAPIAGGSNPRTPTG-----RIEVSSTRYRECLKNHAASIGGHVVDGCGEFMPGGEE 878
            V TS    GG       G     R  VS  RYRECLKNHAAS+GG++ DGCGEFMP GE+
Sbjct: 19   VKTSGGGGGGGGGNFSAGGRSKVRGGVSGVRYRECLKNHAASVGGNIYDGCGEFMPSGED 78

Query: 877  GTPEALKCAACECHRNFHRKESDGEPQSGANYYYCYNPNSKANGSRSRXXXXXXXXXXXX 698
            GT EALKCAACECHRNFHRKE DGE Q         +PN +     +             
Sbjct: 79   GTLEALKCAACECHRNFHRKEIDGETQLN------ISPNYRRGLMLNHLQLPPPLPSPSA 132

Query: 697  XXXXQHQKFPIGLPTSPPSGVIPPMMMTFXXXXXXXXXXXXXXSEEFNVFHTNAGSGXXX 518
                      + L +SP + +I PM + F              SE+ NVFH+NA      
Sbjct: 133  LHGHHKFSMALNLHSSPTAPIIAPMNVAF-----AGGGGNESSSEDLNVFHSNA----EV 183

Query: 517  XXXQYSSLSKKRFRTKFSKEQKDKMLEFAEKVGWRMQKQDEPAVQQFCNEVGVKRQVLKV 338
                  SLSKKRFRTKF++EQKD+MLEFAEKVGWR+QKQDE  V++FC EVGVKRQVLKV
Sbjct: 184  MPPSSFSLSKKRFRTKFTQEQKDRMLEFAEKVGWRIQKQDEEEVERFCTEVGVKRQVLKV 243

Query: 337  WMHNNKHSLKKK 302
            WMHNNK+++KK+
Sbjct: 244  WMHNNKNTVKKQ 255