BLASTX nr result
ID: Cimicifuga21_contig00005976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005976
(755 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284357.1| PREDICTED: histone H2B-like [Vitis vinifera] 121 6e-42
sp|O49118.3|H2B_CAPAN RecName: Full=Histone H2B; AltName: Full=C... 121 1e-41
ref|XP_004156571.1| PREDICTED: histone H2B.4-like [Cucumis sativus] 120 1e-41
gb|AFK45166.1| unknown [Lotus japonicus] 122 2e-41
ref|XP_004137790.1| PREDICTED: histone H2B.4-like [Cucumis sativus] 120 3e-41
>ref|XP_002284357.1| PREDICTED: histone H2B-like [Vitis vinifera]
Length = 146
Score = 121 bits (303), Expect(3) = 6e-42
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = -1
Query: 413 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 234
IGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAV
Sbjct: 74 IGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 133
Query: 233 SEG 225
SEG
Sbjct: 134 SEG 136
Score = 60.5 bits (145), Expect(3) = 6e-42
Identities = 41/80 (51%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Frame = -3
Query: 672 MAPPSKAGKKPIAEKKPITDKKPVSEKSP---------KIXXXXXXXXXXXXXXXXXXXE 520
MAP KA KKP AEKKP +KK V+EKSP K+ E
Sbjct: 1 MAP--KAEKKP-AEKKPAEEKKTVAEKSPAEKKPKAGKKLPKEAGAATDKKKKRTKKSVE 57
Query: 519 TYKIYLFKVLKQVHPDIGIS 460
TYKIY+FKVLKQVHPDIGIS
Sbjct: 58 TYKIYIFKVLKQVHPDIGIS 77
Score = 36.6 bits (83), Expect(3) = 6e-42
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 150 KHAVSEGTKAVTKFTSS 100
KHAVSEGTKAVTKFTSS
Sbjct: 130 KHAVSEGTKAVTKFTSS 146
>sp|O49118.3|H2B_CAPAN RecName: Full=Histone H2B; AltName: Full=CaH2B
gi|2746719|gb|AAB94923.1| histone H2B [Capsicum annuum]
Length = 145
Score = 121 bits (303), Expect(3) = 1e-41
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = -1
Query: 413 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 234
IGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV
Sbjct: 73 IGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 132
Query: 233 SEG 225
SEG
Sbjct: 133 SEG 135
Score = 59.7 bits (143), Expect(3) = 1e-41
Identities = 38/77 (49%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = -3
Query: 672 MAPPSKAGKKPIAEKKPITDKKPV---SEKSPKIXXXXXXXXXXXXXXXXXXXE---TYK 511
MAP + AGKKP AEKKP+ +KK +EK PK + TYK
Sbjct: 1 MAPKAAAGKKP-AEKKPVEEKKAEEVPAEKKPKAGKKLPKDAGRPDKKKKRAKKSIETYK 59
Query: 510 IYLFKVLKQVHPDIGIS 460
IY+FKVLKQVHPDIGIS
Sbjct: 60 IYIFKVLKQVHPDIGIS 76
Score = 36.6 bits (83), Expect(3) = 1e-41
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 150 KHAVSEGTKAVTKFTSS 100
KHAVSEGTKAVTKFTSS
Sbjct: 129 KHAVSEGTKAVTKFTSS 145
>ref|XP_004156571.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
Length = 138
Score = 120 bits (300), Expect(3) = 1e-41
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1
Query: 413 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 234
IGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAV
Sbjct: 66 IGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAV 125
Query: 233 SEG 225
SEG
Sbjct: 126 SEG 128
Score = 60.8 bits (146), Expect(3) = 1e-41
Identities = 35/68 (51%), Positives = 39/68 (57%)
Frame = -3
Query: 663 PSKAGKKPIAEKKPITDKKPVSEKSPKIXXXXXXXXXXXXXXXXXXXETYKIYLFKVLKQ 484
P+KA KKP AEKKP+ +EK PK ETYKIY+FKVLKQ
Sbjct: 3 PTKAEKKP-AEKKPVEKTPSSAEKKPKAEKKIVKDGGDKKKKVKKSNETYKIYIFKVLKQ 61
Query: 483 VHPDIGIS 460
VHPDIGIS
Sbjct: 62 VHPDIGIS 69
Score = 36.6 bits (83), Expect(3) = 1e-41
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 150 KHAVSEGTKAVTKFTSS 100
KHAVSEGTKAVTKFTSS
Sbjct: 122 KHAVSEGTKAVTKFTSS 138
>gb|AFK45166.1| unknown [Lotus japonicus]
Length = 139
Score = 122 bits (306), Expect(3) = 2e-41
Identities = 63/63 (100%), Positives = 63/63 (100%)
Frame = -1
Query: 413 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 234
IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV
Sbjct: 67 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 126
Query: 233 SEG 225
SEG
Sbjct: 127 SEG 129
Score = 57.4 bits (137), Expect(3) = 2e-41
Identities = 36/70 (51%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = -3
Query: 663 PSKAGKKPIAEKKPITDKKPVSEKSPKIXXXXXXXXXXXXXXXXXXXE--TYKIYLFKVL 490
P+KA KKP AEKKP +K P +EK PK TYKIY+FKVL
Sbjct: 3 PAKAEKKP-AEKKPAAEKAP-AEKKPKAEKKIAKEGGSEKKKKKSKKSVETYKIYIFKVL 60
Query: 489 KQVHPDIGIS 460
KQVHPDIGIS
Sbjct: 61 KQVHPDIGIS 70
Score = 36.6 bits (83), Expect(3) = 2e-41
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 150 KHAVSEGTKAVTKFTSS 100
KHAVSEGTKAVTKFTSS
Sbjct: 123 KHAVSEGTKAVTKFTSS 139
>ref|XP_004137790.1| PREDICTED: histone H2B.4-like [Cucumis sativus]
Length = 138
Score = 120 bits (300), Expect(3) = 3e-41
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = -1
Query: 413 IGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAV 234
IGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAV
Sbjct: 66 IGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAV 125
Query: 233 SEG 225
SEG
Sbjct: 126 SEG 128
Score = 59.3 bits (142), Expect(3) = 3e-41
Identities = 35/68 (51%), Positives = 38/68 (55%)
Frame = -3
Query: 663 PSKAGKKPIAEKKPITDKKPVSEKSPKIXXXXXXXXXXXXXXXXXXXETYKIYLFKVLKQ 484
P+KA KKP AEKKP +EK PK ETYKIY+FKVLKQ
Sbjct: 3 PTKAEKKP-AEKKPAEKTPSSAEKKPKAEKKIVKDGGDKKKKVKKSNETYKIYIFKVLKQ 61
Query: 483 VHPDIGIS 460
VHPDIGIS
Sbjct: 62 VHPDIGIS 69
Score = 36.6 bits (83), Expect(3) = 3e-41
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -3
Query: 150 KHAVSEGTKAVTKFTSS 100
KHAVSEGTKAVTKFTSS
Sbjct: 122 KHAVSEGTKAVTKFTSS 138