BLASTX nr result
ID: Cimicifuga21_contig00005945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005945
(1086 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 632 e-179
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 629 e-178
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 609 e-172
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 607 e-171
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 603 e-170
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 632 bits (1631), Expect = e-179
Identities = 305/364 (83%), Positives = 331/364 (90%), Gaps = 2/364 (0%)
Frame = -1
Query: 1086 YPDGTMMHLRYSARKRAADELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPW 907
YPDG+M L +S RKR ADELKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRAR+MPW
Sbjct: 422 YPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 481
Query: 906 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQ 727
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGEILVASTQ
Sbjct: 482 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 541
Query: 726 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPVDLPTPALIKPIELWTGKQLFSVLVR 547
DFLTSSFLITRKDTFYDRAAFSLMCSYMGD MD VDLPTPA+IKP+ELWTGKQLF+VL+R
Sbjct: 542 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLR 601
Query: 546 PHAHLKVFINLTISERNYSK--CGETMCPNDGYVYIRNSELISGQLGKVTLGNGNKDGLF 373
PHA+++V++NLT+ E+ Y+K ETMCP+DG+VY RNSELISGQLGK TLGNGNKDGLF
Sbjct: 602 PHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLF 661
Query: 372 SVILRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNRQKKVKIDEGYEAC 193
SV+LRDYNAHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG LN QK +I+EGYE C
Sbjct: 662 SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENC 721
Query: 192 DEYIQLYNEGKLTLQPGCDSAQTLEAEITNVLNEIRETAGKVCMNELHWRNSPLIMSQCG 13
E IQ YN+GKL LQPGC++AQTLEAEIT VLN+IRET VCM ELHWRNSPLIMSQCG
Sbjct: 722 HELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCG 781
Query: 12 SKGS 1
SKGS
Sbjct: 782 SKGS 785
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 629 bits (1621), Expect = e-178
Identities = 304/364 (83%), Positives = 330/364 (90%), Gaps = 2/364 (0%)
Frame = -1
Query: 1086 YPDGTMMHLRYSARKRAADELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPW 907
YPDG+M L +S RKR ADELKYG IVERHLEDGD+VLFNRQPSLHRMSIM HRAR+MPW
Sbjct: 422 YPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 481
Query: 906 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQ 727
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGEILVASTQ
Sbjct: 482 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 541
Query: 726 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPVDLPTPALIKPIELWTGKQLFSVLVR 547
DFLTSSFLITRKDTFYDRAAFSLMCSYMGD MD VDLPTPA+IK +ELWTGKQLF+VL+R
Sbjct: 542 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLR 601
Query: 546 PHAHLKVFINLTISERNYSK--CGETMCPNDGYVYIRNSELISGQLGKVTLGNGNKDGLF 373
PHA+++V++NLT+ E+ Y+K ETMCP+DG+VY RNSELISGQLGK TLGNGNKDGLF
Sbjct: 602 PHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLF 661
Query: 372 SVILRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNRQKKVKIDEGYEAC 193
SV+LRDYNAHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG LN QK +I+EGYE C
Sbjct: 662 SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENC 721
Query: 192 DEYIQLYNEGKLTLQPGCDSAQTLEAEITNVLNEIRETAGKVCMNELHWRNSPLIMSQCG 13
E IQ YN+GKL LQPGC++AQTLEAEIT VLN+IRET VCM ELHWRNSPLIMSQCG
Sbjct: 722 HELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCG 781
Query: 12 SKGS 1
SKGS
Sbjct: 782 SKGS 785
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 609 bits (1571), Expect = e-172
Identities = 290/367 (79%), Positives = 327/367 (89%), Gaps = 6/367 (1%)
Frame = -1
Query: 1083 PDGTMMHLRYSARKRAADELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPWR 904
PDGT +HL+Y R+ AA +LKYGC+VERHLEDGDIVLFNRQPSLHRMSIMSHRAR+MPWR
Sbjct: 413 PDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 472
Query: 903 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQD 724
TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMGVQNNLCTPKNGEILVASTQD
Sbjct: 473 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 532
Query: 723 FLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPVDLPTPALIKPIELWTGKQLFSVLVRP 544
FLTSSFL+TRKD FYDR++FSL+CSY+GDAM+ +DLPTPALIKPIELWTGKQLFSVLVRP
Sbjct: 533 FLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRP 592
Query: 543 HAHLKVFINLTISERNYSKC------GETMCPNDGYVYIRNSELISGQLGKVTLGNGNKD 382
+A KVF+NLT+ E+ Y E MCPNDG+VY RNSEL+SGQ+GK TLGNGNKD
Sbjct: 593 NACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKD 652
Query: 381 GLFSVILRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNRQKKVKIDEGY 202
G+FS ++RDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE+LN++KK+KID GY
Sbjct: 653 GMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGY 712
Query: 201 EACDEYIQLYNEGKLTLQPGCDSAQTLEAEITNVLNEIRETAGKVCMNELHWRNSPLIMS 22
+ C + I Y++G L LQPGC++AQTLE IT VLNEIRE AGKVCMN LHWRNSPLIMS
Sbjct: 713 KDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMS 772
Query: 21 QCGSKGS 1
QCGSKGS
Sbjct: 773 QCGSKGS 779
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 607 bits (1565), Expect = e-171
Identities = 286/362 (79%), Positives = 322/362 (88%)
Frame = -1
Query: 1086 YPDGTMMHLRYSARKRAADELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPW 907
+PDG L++ RKR A ELKYG +VERHLEDGDIVLFNRQPSLHRMSIM HRARVMPW
Sbjct: 436 FPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSLHRMSIMCHRARVMPW 495
Query: 906 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQ 727
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQ
Sbjct: 496 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQ 555
Query: 726 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPVDLPTPALIKPIELWTGKQLFSVLVR 547
DFLTSSFLITR+DTFYDR F+LMCSYMGDA++ +DLPTPA++KP+ELWTGKQLF VL+R
Sbjct: 556 DFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKPVELWTGKQLFGVLIR 615
Query: 546 PHAHLKVFINLTISERNYSKCGETMCPNDGYVYIRNSELISGQLGKVTLGNGNKDGLFSV 367
P A +KVF+N + E+N+ K ETMCP DGYV+ +NSELI GQLGK TLGNG+KDGLF+V
Sbjct: 616 PSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLGKGTLGNGSKDGLFTV 675
Query: 366 ILRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNRQKKVKIDEGYEACDE 187
+LRDY AAASCMNRLAKLSARWIGNHGFSIGIDDVQPG L +K+ +I EGY ACD+
Sbjct: 676 LLRDYGEQAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGSRLTVEKEKRIAEGYRACDK 735
Query: 186 YIQLYNEGKLTLQPGCDSAQTLEAEITNVLNEIRETAGKVCMNELHWRNSPLIMSQCGSK 7
+I L+N+G+LTLQPGCD+AQTLE+EIT LN+IRE AG+VC+NELHWRNSPLIMSQCGSK
Sbjct: 736 HISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNELHWRNSPLIMSQCGSK 795
Query: 6 GS 1
GS
Sbjct: 796 GS 797
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 603 bits (1555), Expect = e-170
Identities = 290/374 (77%), Positives = 325/374 (86%), Gaps = 13/374 (3%)
Frame = -1
Query: 1083 PDGTMMHLRYSARKRAADELKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARVMPWR 904
PDG L+Y R+ A +LK GCIVERHLEDGD+VLFNRQPSLHRMSIMSHRAR+MPWR
Sbjct: 413 PDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 472
Query: 903 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQD 724
TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMGVQNNLCTPKNGEILVASTQD
Sbjct: 473 TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 532
Query: 723 FLTSSFLITRKDTFYDRAAFSLMCSYMGDAMDPVDLPTPALIKPIELWTGKQLFSVLVRP 544
FLTSSFL+TRKDTFYDR++F+L+CSY+GDAM+ +DLPTPALIKPIELWTGKQLFSVLVRP
Sbjct: 533 FLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRP 592
Query: 543 HAHLKVFINLTISERNYSK------------CG-ETMCPNDGYVYIRNSELISGQLGKVT 403
+AH +VF+NL + E+ YSK CG ETMCPNDGYVY RNSEL+SGQ+GK T
Sbjct: 593 NAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKAT 652
Query: 402 LGNGNKDGLFSVILRDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGENLNRQKK 223
LGNGNKDGL+SV+LRDYN+HAAASCMNRLAK SAR+IGNHGFSIG+DDVQPGE+LNRQKK
Sbjct: 653 LGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKK 712
Query: 222 VKIDEGYEACDEYIQLYNEGKLTLQPGCDSAQTLEAEITNVLNEIRETAGKVCMNELHWR 43
+ID GY+ C + I L+ +G L L PGC++AQTLE IT VLNEIR AG VCM+ LHWR
Sbjct: 713 KEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWR 772
Query: 42 NSPLIMSQCGSKGS 1
NSPLIMSQCGSKGS
Sbjct: 773 NSPLIMSQCGSKGS 786