BLASTX nr result

ID: Cimicifuga21_contig00005941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005941
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37670.3| unnamed protein product [Vitis vinifera]              343   1e-92
ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltrans...   343   1e-92
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...   326   3e-87
ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [R...   322   4e-86
ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltrans...   318   6e-85

>emb|CBI37670.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  343 bits (881), Expect = 1e-92
 Identities = 169/221 (76%), Positives = 191/221 (86%)
 Frame = -3

Query: 680 DGSPNVGGAWTQEATAQASLVVDAIRLSTEFLAPKGTFVTKVFRSQDYNAVLYCLKQLFE 501
           DGSPN+GGAWTQEATAQ +LV+DA+RL+T+FLAPKG FVTKVFRSQDYN+VLYCLKQLFE
Sbjct: 118 DGSPNIGGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFE 177

Query: 500 KVEVTKPLASRSSSAEIYVIAQKYKAPAKIDPRLLDIKHLFQGATESPKVVDVLRRTNQK 321
           KVEV KP ASRS+SAEI+V+  KYKAPAKIDPRLLD+KHLFQG  E  KVVDVLR T QK
Sbjct: 178 KVEVDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLFQGTIEPRKVVDVLRGTKQK 237

Query: 320 RHRDGYADGDTTLRKVCLASEFVQSRSPLEILGSSTSISFNDPASLPIKDHSLTTEEVKI 141
           RHRDGY DGDTTLRKV  A+ F+ S +PLEILGS TSISF+DPASLPIKDH+LTTEEVK 
Sbjct: 238 RHRDGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPIKDHALTTEEVKT 297

Query: 140 LCDDLRVLGKQDFRHLEKWHRNIRKSLFPTKQLTPKAEVDD 18
           LCDDLRVLGKQDF+HL KW  ++RK+L P ++ T  A  DD
Sbjct: 298 LCDDLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDD 338


>ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
           vinifera]
          Length = 842

 Score =  343 bits (881), Expect = 1e-92
 Identities = 169/221 (76%), Positives = 191/221 (86%)
 Frame = -3

Query: 680 DGSPNVGGAWTQEATAQASLVVDAIRLSTEFLAPKGTFVTKVFRSQDYNAVLYCLKQLFE 501
           DGSPN+GGAWTQEATAQ +LV+DA+RL+T+FLAPKG FVTKVFRSQDYN+VLYCLKQLFE
Sbjct: 118 DGSPNIGGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFE 177

Query: 500 KVEVTKPLASRSSSAEIYVIAQKYKAPAKIDPRLLDIKHLFQGATESPKVVDVLRRTNQK 321
           KVEV KP ASRS+SAEI+V+  KYKAPAKIDPRLLD+KHLFQG  E  KVVDVLR T QK
Sbjct: 178 KVEVDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLFQGTIEPRKVVDVLRGTKQK 237

Query: 320 RHRDGYADGDTTLRKVCLASEFVQSRSPLEILGSSTSISFNDPASLPIKDHSLTTEEVKI 141
           RHRDGY DGDTTLRKV  A+ F+ S +PLEILGS TSISF+DPASLPIKDH+LTTEEVK 
Sbjct: 238 RHRDGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPIKDHALTTEEVKT 297

Query: 140 LCDDLRVLGKQDFRHLEKWHRNIRKSLFPTKQLTPKAEVDD 18
           LCDDLRVLGKQDF+HL KW  ++RK+L P ++ T  A  DD
Sbjct: 298 LCDDLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDD 338


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
           [Glycine max]
          Length = 829

 Score =  326 bits (835), Expect = 3e-87
 Identities = 160/213 (75%), Positives = 183/213 (85%), Gaps = 1/213 (0%)
 Frame = -3

Query: 680 DGSPNVGGAWTQEATAQASLVVDAIRLSTEFLAPKGTFVTKVFRSQDYNAVLYCLKQLFE 501
           DGSPNVGGAW QEAT+Q +LV+DA++L+T+FLAPKG FVTK+FRSQDY++V+YCLKQLFE
Sbjct: 118 DGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFE 177

Query: 500 KVEVTKPLASRSSSAEIYVIAQKYKAPAKIDPRLLDIKHLFQGATE-SPKVVDVLRRTNQ 324
           KVEV KP ASRS SAEIYV+  KYKAPAKIDPRLLD+KHLFQG+ E  PKVVDVLR + Q
Sbjct: 178 KVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDSKQ 237

Query: 323 KRHRDGYADGDTTLRKVCLASEFVQSRSPLEILGSSTSISFNDPASLPIKDHSLTTEEVK 144
           KRHRDGY DGDTTLRK+  A+ F+ S SPLEILGS TSI+F DPA  PIKDH LTTEEVK
Sbjct: 238 KRHRDGYEDGDTTLRKLSSAANFIWSNSPLEILGSVTSITFTDPADSPIKDHDLTTEEVK 297

Query: 143 ILCDDLRVLGKQDFRHLEKWHRNIRKSLFPTKQ 45
            LCDDLRVLGKQDF+HL KW   IRK+L PT++
Sbjct: 298 SLCDDLRVLGKQDFKHLLKWRIQIRKALSPTQK 330


>ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
           gi|223547931|gb|EEF49423.1| ribosomal RNA
           methyltransferase, putative [Ricinus communis]
          Length = 828

 Score =  322 bits (825), Expect = 4e-86
 Identities = 156/221 (70%), Positives = 188/221 (85%), Gaps = 1/221 (0%)
 Frame = -3

Query: 680 DGSPNVGGAWTQEATAQASLVVDAIRLSTEFLAPKGTFVTKVFRSQDYNAVLYCLKQLFE 501
           DGSPN+GGAW QEA +Q +LV+DA+RL+T+FLAPKGTFVTKVFRSQDYN+V+YCL QLFE
Sbjct: 118 DGSPNIGGAWAQEAMSQNALVIDAVRLATQFLAPKGTFVTKVFRSQDYNSVIYCLNQLFE 177

Query: 500 KVEVTKPLASRSSSAEIYVIAQKYKAPAKIDPRLLDIKHLFQGATE-SPKVVDVLRRTNQ 324
           KVEV KP ASRS+SAEI+V+  KYKAPAKIDPRLLD+KHLFQG+ E   KV+DVLR + Q
Sbjct: 178 KVEVDKPAASRSASAEIFVLGLKYKAPAKIDPRLLDVKHLFQGSVEPQRKVIDVLRGSKQ 237

Query: 323 KRHRDGYADGDTTLRKVCLASEFVQSRSPLEILGSSTSISFNDPASLPIKDHSLTTEEVK 144
           KRHRDGY DG++ +RKV  A++FV S +PLEILGS TSI+F DPASLP++DH+LTTEEVK
Sbjct: 238 KRHRDGYEDGESIIRKVSSAADFVWSDTPLEILGSVTSIAFEDPASLPLRDHALTTEEVK 297

Query: 143 ILCDDLRVLGKQDFRHLEKWHRNIRKSLFPTKQLTPKAEVD 21
            LCDDLRVLGKQDF+HL KW  +IRK+L P+++ T     D
Sbjct: 298 ALCDDLRVLGKQDFKHLLKWRMHIRKALSPSQKATSTTSTD 338


>ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like
           [Cucumis sativus]
          Length = 854

 Score =  318 bits (815), Expect = 6e-85
 Identities = 160/221 (72%), Positives = 185/221 (83%), Gaps = 1/221 (0%)
 Frame = -3

Query: 680 DGSPNVGGAWTQEATAQASLVVDAIRLSTEFLAPKGTFVTKVFRSQDYNAVLYCLKQLFE 501
           DGSPNVGGAW QEA AQ SLV+D++RL+T+ LAPKGTFVTKVFRSQDY++VLYC+KQLFE
Sbjct: 118 DGSPNVGGAWAQEAMAQNSLVIDSVRLATQLLAPKGTFVTKVFRSQDYSSVLYCMKQLFE 177

Query: 500 KVEVTKPLASRSSSAEIYVIAQKYKAPAKIDPRLLDIKHLFQGATE-SPKVVDVLRRTNQ 324
           KVEV KP ASRS+SAEIYV+  +YKAPAKIDPRLLD+K+LFQG+ E   KVVDVLR T Q
Sbjct: 178 KVEVDKPAASRSASAEIYVLGIRYKAPAKIDPRLLDVKYLFQGSIEPQQKVVDVLRGTKQ 237

Query: 323 KRHRDGYADGDTTLRKVCLASEFVQSRSPLEILGSSTSISFNDPASLPIKDHSLTTEEVK 144
           KRHRDGY DG TTLRKV  AS F+ S SPLE+LG+ T I+F+DP SLPIKDH LTTEEVK
Sbjct: 238 KRHRDGYEDGATTLRKVSSASNFIWSDSPLEVLGTVTCIAFDDPDSLPIKDHDLTTEEVK 297

Query: 143 ILCDDLRVLGKQDFRHLEKWHRNIRKSLFPTKQLTPKAEVD 21
            LCDDLRVLGKQDF+HL KW  +IRK+L P ++ T  +  D
Sbjct: 298 ALCDDLRVLGKQDFKHLLKWRLHIRKALSPDQKPTSTSVKD 338


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