BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005940
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23047.3| unnamed protein product [Vitis vinifera]              302   1e-79
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...   295   1e-77
gb|AEZ00900.1| putative RNA recognition motif-containing protein...   281   2e-73
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...   279   9e-73
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...   267   5e-69

>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  302 bits (773), Expect = 1e-79
 Identities = 152/217 (70%), Positives = 173/217 (79%), Gaps = 6/217 (2%)
 Frame = +3

Query: 126 MGDAYWRYNDARQQAMPPIP---LKRPRSDYDIPGGHELPGYFSREDERAGYRMIGETDN 296
           M D YWRY + RQ   PPIP    KRPRSDYD+PGGH+LP YFSREDERA +R I ++D+
Sbjct: 1   MADPYWRYGEVRQP--PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDS 58

Query: 297 IGASYDRYLRSGQIAAYXXXXXXXXX--MIPHTVDDMRMSGVRNFDSMAG-KGQSVGLAG 467
           IGASYDRYLR+ Q+ +Y           +  H VDD R+ GVR  D  A  K QS+G +G
Sbjct: 59  IGASYDRYLRNAQMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 118

Query: 468 GKPEIPLPPDASNTLFVEGLPANCTRREVSHIFRPFVGFKEVRLVSKESRHSGGDPLVLC 647
           G+PE+PLPPDAS+TLFVEGLPANCTRREVSHIFRPFVG+KEVRLVSKESRHSGGDPLVLC
Sbjct: 119 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 178

Query: 648 FVDFGTPAQAATALDALQGYKFDEHDRDSDNIRLQFA 758
           FVDF +PA AATA+DALQGYKFDEHDRDS N+RLQFA
Sbjct: 179 FVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFA 215


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score =  295 bits (756), Expect = 1e-77
 Identities = 150/216 (69%), Positives = 170/216 (78%), Gaps = 5/216 (2%)
 Frame = +3

Query: 126 MGDAYWRYNDARQQAMPPIP---LKRPRSDYDIPGGHELPGYFSREDERAGYRMIGETDN 296
           M D YWRY + RQ   PPIP    KRPRSDYD+PGGH+LP YFSREDERA +R I ++D+
Sbjct: 1   MADPYWRYGEVRQP--PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDS 58

Query: 297 IGASYDRYLRSGQIA-AYXXXXXXXXXMIPHTVDDMRMSGVRNFDSMAG-KGQSVGLAGG 470
           IGASYDRYLR+   +            +  H VDD R+ GVR  D  A  K QS+G +GG
Sbjct: 59  IGASYDRYLRNAMPSYGGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSGG 118

Query: 471 KPEIPLPPDASNTLFVEGLPANCTRREVSHIFRPFVGFKEVRLVSKESRHSGGDPLVLCF 650
           +PE+PLPPDAS+TLFVEGLPANCTRREVSHIFRPFVG+KEVRLVSKESRHSGGDPLVLCF
Sbjct: 119 RPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCF 178

Query: 651 VDFGTPAQAATALDALQGYKFDEHDRDSDNIRLQFA 758
           VDF +PA AATA+DALQGYKFDEHDRDS N+RLQFA
Sbjct: 179 VDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFA 214


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  281 bits (720), Expect = 2e-73
 Identities = 153/249 (61%), Positives = 172/249 (69%), Gaps = 20/249 (8%)
 Frame = +3

Query: 72  FYFSPLQLNSLLRLRSTAMGDAYWRYNDARQQAM----PPIPLKRPRSDY-DIPGGHELP 236
           F+F PL            M DAYWRY+D R QA     P  PLKRPR+DY DIPGG E+ 
Sbjct: 24  FFFVPLT-------ERPRMADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVL 76

Query: 237 GYFSREDERAGYRMIGETDNIGASYDRYLRSG-QIAAYXXXXXXXXXMIPHTVDDMRMSG 413
           GY+SR++ER G+R I +T++I ASYDRYLR+G    A          M  H VDD RM G
Sbjct: 77  GYYSRDEERTGHRTIRDTESIAASYDRYLRNGVSFGAGESVRTVAGGMTGHPVDDRRMMG 136

Query: 414 VRNFDSMA-----GK---------GQSVGLAGGKPEIPLPPDASNTLFVEGLPANCTRRE 551
           V   D        G+         G+SVG  GG+PE PLP DASNTLFVEGLPANCTRRE
Sbjct: 137 VGGMDGRTVGYGGGRPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRRE 196

Query: 552 VSHIFRPFVGFKEVRLVSKESRHSGGDPLVLCFVDFGTPAQAATALDALQGYKFDEHDRD 731
           VSHIFRPFVGF+EVRLV+KESRH GGDPLVLCFVDF TPAQAA ALDALQGYKFDEHDR+
Sbjct: 197 VSHIFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRE 256

Query: 732 SDNIRLQFA 758
           S N+RLQFA
Sbjct: 257 SANLRLQFA 265


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score =  279 bits (714), Expect = 9e-73
 Identities = 140/218 (64%), Positives = 169/218 (77%), Gaps = 7/218 (3%)
 Frame = +3

Query: 126 MGDAYWRYNDARQ---QAMPPIPLKRPRSDYDIPGGHELPGYFSREDERAGYRMIGETDN 296
           M DAYWRY D+RQ   Q++  I  KR RSDYD+P GHELP YFSR+DER   R + +TD+
Sbjct: 1   MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60

Query: 297 IGASYDRYLRSGQIAAYXXXXXXXXX---MIPHTVDDMRMSGVRNFD-SMAGKGQSVGLA 464
           IGASYDRYLRS Q+++Y            M    VDD R+ G+ + + +   K +++G  
Sbjct: 61  IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120

Query: 465 GGKPEIPLPPDASNTLFVEGLPANCTRREVSHIFRPFVGFKEVRLVSKESRHSGGDPLVL 644
           GG+PE+PLPPDAS+TLFVEGLP+NCTRREV+HIFRPFVG+KEVRLVSKESRH GGDPLVL
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180

Query: 645 CFVDFGTPAQAATALDALQGYKFDEHDRDSDNIRLQFA 758
           CFVDF +PA AATA+DALQGYKFDEHDRDS ++RLQFA
Sbjct: 181 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFA 218


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score =  267 bits (682), Expect = 5e-69
 Identities = 135/217 (62%), Positives = 164/217 (75%), Gaps = 6/217 (2%)
 Frame = +3

Query: 126 MGDAYWRYNDARQQAMPPIPL---KRPRSDYDIPGGHELPGYFSREDERAGYRMIGETDN 296
           M DAYWRY+DARQ    PIP    KR RSDYD+  GHELP Y++R+D+R   R I +TD+
Sbjct: 1   MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60

Query: 297 IGASYDRYLRSGQIAAYXXXXXXXXXM-IPHTV-DDMRMSGVRNFD-SMAGKGQSVGLAG 467
           IGASYDRYLRS  I++Y           +P+ V DD R+ G+   D     K +++GL  
Sbjct: 61  IGASYDRYLRSAPISSYSGGQSARPISGVPNRVADDPRIMGIGGLDPGPTVKDRTLGLGS 120

Query: 468 GKPEIPLPPDASNTLFVEGLPANCTRREVSHIFRPFVGFKEVRLVSKESRHSGGDPLVLC 647
           G+PE  LPPDA++TLFVEGLP++C+RREV+HIFRPFVG+KEVRLVSKESR  GGDPLVLC
Sbjct: 121 GRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVLC 180

Query: 648 FVDFGTPAQAATALDALQGYKFDEHDRDSDNIRLQFA 758
           FVDF +PA AATA+DALQGYKFDEHDRDS ++RLQFA
Sbjct: 181 FVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFA 217