BLASTX nr result

ID: Cimicifuga21_contig00005936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005936
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur pr...   598   e-168
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...   591   e-166
ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago ...   579   e-163
ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur pr...   572   e-161
ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycin...   568   e-159

>ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
            [Vitis vinifera] gi|297740110|emb|CBI30292.3| unnamed
            protein product [Vitis vinifera]
          Length = 344

 Score =  598 bits (1541), Expect = e-168
 Identities = 276/350 (78%), Positives = 307/350 (87%)
 Frame = -3

Query: 1381 MSFFEQNFELKEIQKLEGHTDRVWSLAWNPTTGVDGIPAMIASCSGDKTVRIWQQNPSGK 1202
            M F E+  ELKEIQ+LEGH D+VWSLAWNPT+       ++ASCSGDKTVRIWQ++PS  
Sbjct: 1    MDFSEEGLELKEIQRLEGHNDKVWSLAWNPTS------TLLASCSGDKTVRIWQRSPSTS 54

Query: 1201 QWECKAILDETHTRTVRSCDWSPTGKLLATASFDATTAIWEHIGDDFECVATLEGHENEV 1022
             W CKA+L+ETHTRTVRSC WSP+GKLLATASFDATTAIWE IGDDFECV+TLEGHENEV
Sbjct: 55   SWHCKAVLEETHTRTVRSCAWSPSGKLLATASFDATTAIWELIGDDFECVSTLEGHENEV 114

Query: 1021 KSVSWNSSGSLLATCSRDKSVWIWEVLPGNEFECVSVLQGHTQDVKMVQWHPSMDVLFSC 842
            KSVSWN+SGSLLATCSRDKSVWIWEV PGNEFECVSVLQGHTQDVKMVQWHP MDVLFSC
Sbjct: 115  KSVSWNASGSLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVQWHPIMDVLFSC 174

Query: 841  SYDNTIKVWAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFNSSGNKMVTCSDDLTLKVWG 662
            SYDNT+K+WAEDGDSDDW C+QTL E NNGH+STVWALSFN  G+KMVTCSDDLT+K+W 
Sbjct: 175  SYDNTVKIWAEDGDSDDWHCVQTLGESNNGHTSTVWALSFNPEGDKMVTCSDDLTVKIWD 234

Query: 661  TDSVSKQIHGDDFVPWRHLCTLSGLHDRTIFSVHWSREGVIASGAADDTIRLFVEDNDSL 482
            TDS++ Q  G+ + PW+HLCTLSG HDRTIFS HWSREG+IA+GAADD IR FVE  D L
Sbjct: 235  TDSITMQA-GEGYAPWKHLCTLSGYHDRTIFSAHWSREGIIATGAADDAIRFFVESKDGL 293

Query: 481  SDGPSYKMLLKKENAHDMDVNSVQWSFKENRLLASASDDGTIKIWELASL 332
             DGP YK++LKKE AHDMD+NSVQWS  ENRLLASASDDGTIKIWELAS+
Sbjct: 294  VDGPLYKLMLKKEQAHDMDINSVQWSSGENRLLASASDDGTIKIWELASI 343


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
            gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 349

 Score =  591 bits (1524), Expect = e-166
 Identities = 274/350 (78%), Positives = 307/350 (87%)
 Frame = -3

Query: 1381 MSFFEQNFELKEIQKLEGHTDRVWSLAWNPTTGVDGIPAMIASCSGDKTVRIWQQNPSGK 1202
            M   + NFELKEIQKL GHTDRVWSLAWNP T   G PA+ ASCSGDKTVRIW+Q+PS  
Sbjct: 1    MDLIDTNFELKEIQKLHGHTDRVWSLAWNPATRFGGAPAVFASCSGDKTVRIWEQSPSSC 60

Query: 1201 QWECKAILDETHTRTVRSCDWSPTGKLLATASFDATTAIWEHIGDDFECVATLEGHENEV 1022
             ++CKA+L+ETHTRTVRSC WSP+GKLLATASFDATTAIWE+IG DFECV+TLEGHENEV
Sbjct: 61   SFDCKAVLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENIGGDFECVSTLEGHENEV 120

Query: 1021 KSVSWNSSGSLLATCSRDKSVWIWEVLPGNEFECVSVLQGHTQDVKMVQWHPSMDVLFSC 842
            KSVSWN+SGSLLATCSRDK+VWIWEV+PGNEFEC SVLQGHTQDVKMV+WHP++DVLFSC
Sbjct: 121  KSVSWNASGSLLATCSRDKTVWIWEVMPGNEFECASVLQGHTQDVKMVKWHPNIDVLFSC 180

Query: 841  SYDNTIKVWAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFNSSGNKMVTCSDDLTLKVWG 662
            SYDNTIKVWAEDGD  DW C+QTL E NNGH+STVWALSFN+ G+KMVTCSDDLTLK+W 
Sbjct: 181  SYDNTIKVWAEDGDG-DWHCVQTLGESNNGHTSTVWALSFNAEGDKMVTCSDDLTLKIWE 239

Query: 661  TDSVSKQIHGDDFVPWRHLCTLSGLHDRTIFSVHWSREGVIASGAADDTIRLFVEDNDSL 482
            TD + + + GDD   W H+CTLSG HDRTIFS HWSREG+IASGAADD IR FVE  D L
Sbjct: 240  TD-IGRMVSGDDHASWNHVCTLSGYHDRTIFSAHWSREGIIASGAADDGIRFFVESKDDL 298

Query: 481  SDGPSYKMLLKKENAHDMDVNSVQWSFKENRLLASASDDGTIKIWELASL 332
             +GPSY++LLKKE AHDMD+NSVQW+  ENRLLASASDDGTIKIWELA+L
Sbjct: 299  VNGPSYRLLLKKEKAHDMDINSVQWAPGENRLLASASDDGTIKIWELATL 348


>ref|XP_003625815.1| hypothetical protein MTR_7g104550 [Medicago truncatula]
            gi|355500830|gb|AES82033.1| hypothetical protein
            MTR_7g104550 [Medicago truncatula]
          Length = 344

 Score =  579 bits (1492), Expect = e-163
 Identities = 268/344 (77%), Positives = 300/344 (87%)
 Frame = -3

Query: 1366 QNFELKEIQKLEGHTDRVWSLAWNPTTGVDGIPAMIASCSGDKTVRIWQQNPSGKQWECK 1187
            +  ELKE+QKLEGHTDRVWSL WNP TG  GIP + ASCSGDKTVRIW+QN S   + CK
Sbjct: 2    ERLELKEVQKLEGHTDRVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSTNLFSCK 61

Query: 1186 AILDETHTRTVRSCDWSPTGKLLATASFDATTAIWEHIGDDFECVATLEGHENEVKSVSW 1007
            A L+ETHTRTVRSC WSP+GKLLATASFDATTAIWE++G +FECV+TLEGHENEVKSVSW
Sbjct: 62   ATLEETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGEFECVSTLEGHENEVKSVSW 121

Query: 1006 NSSGSLLATCSRDKSVWIWEVLPGNEFECVSVLQGHTQDVKMVQWHPSMDVLFSCSYDNT 827
            N+SG+LLATCSRDKSVWIWEV PGNEFECVSVLQGHTQDVKMV+WHP+ D+LFSCSYDN 
Sbjct: 122  NASGTLLATCSRDKSVWIWEVQPGNEFECVSVLQGHTQDVKMVRWHPTEDILFSCSYDNN 181

Query: 826  IKVWAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFNSSGNKMVTCSDDLTLKVWGTDSVS 647
            IKVWA++GDSDDW C+QTL EPNNGH+STVWALSFN+SG+KMVTCSDDLTLKVW T+ V 
Sbjct: 182  IKVWADEGDSDDWQCVQTLGEPNNGHTSTVWALSFNASGDKMVTCSDDLTLKVWETEHVG 241

Query: 646  KQIHGDDFVPWRHLCTLSGLHDRTIFSVHWSREGVIASGAADDTIRLFVEDNDSLSDGPS 467
             Q  G  F PWRH+CTL+G HDRTIFSVHWSR G+ ASGAADD IRLFVE+N+S  DGP 
Sbjct: 242  MQ-SGGGFAPWRHVCTLTGYHDRTIFSVHWSRGGIFASGAADDAIRLFVENNESQVDGPL 300

Query: 466  YKMLLKKENAHDMDVNSVQWSFKENRLLASASDDGTIKIWELAS 335
            YK+LLKKE AHDMD+N VQWS  E  LLASASDDGTIK+W+L S
Sbjct: 301  YKLLLKKEKAHDMDINYVQWSHGEKPLLASASDDGTIKVWDLVS 344


>ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur protein assembly
            protein-like [Cucumis sativus]
            gi|449500925|ref|XP_004161232.1| PREDICTED: probable
            cytosolic iron-sulfur protein assembly protein-like
            [Cucumis sativus]
          Length = 350

 Score =  572 bits (1475), Expect = e-161
 Identities = 264/351 (75%), Positives = 301/351 (85%), Gaps = 1/351 (0%)
 Frame = -3

Query: 1381 MSFFEQNFELKEIQKLEGHTDRVWSLAWNPTTGVDGIPAMIASCSGDKTVRIWQQNPSGK 1202
            M   +  FELKEI KLEGHTDRVWSLAWNP TGV GIP + ASCSGDKTVRIW+Q+PS  
Sbjct: 1    MELLDGRFELKEIAKLEGHTDRVWSLAWNPATGVGGIPLVFASCSGDKTVRIWEQSPSSG 60

Query: 1201 QWECKAILDETHTRTVRSCDWSPTGKLLATASFDATTAIWEHIGDDFECVATLEGHENEV 1022
             W CKA+L+ETHTRTVRSC WSP GKLLATASFDATTAIWE+ G D+ECV+TLEGHENE+
Sbjct: 61   SWNCKAVLEETHTRTVRSCAWSPNGKLLATASFDATTAIWENTGGDYECVSTLEGHENEI 120

Query: 1021 KSVSWNSSGSLLATCSRDKSVWIWEVLPGNEFECVSVLQGHTQDVKMVQWHPSMDVLFSC 842
            KSV+WN+SGSLLATCSRD++VWIWEVLPGNE+ECVSVLQGHTQDVKMVQWHP+MD+LFSC
Sbjct: 121  KSVAWNASGSLLATCSRDRTVWIWEVLPGNEYECVSVLQGHTQDVKMVQWHPTMDLLFSC 180

Query: 841  SYDNTIKVWAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFNSSGNKMVTCSDDLTLKVWG 662
            SYDNT+KVWA D D+DDW C+QTLDE NNGHSSTVWALSFN++G+KMV+CSDDLTLK+W 
Sbjct: 181  SYDNTVKVWAGDDDNDDWHCVQTLDESNNGHSSTVWALSFNATGDKMVSCSDDLTLKIWE 240

Query: 661  TDSVSKQIHGD-DFVPWRHLCTLSGLHDRTIFSVHWSREGVIASGAADDTIRLFVEDNDS 485
            TD    ++H +  + PWRH CTLSG HDRTIFSVHWSR G+IASGAADD IRLFVE+ + 
Sbjct: 241  TDET--KLHSEAGYSPWRHTCTLSGYHDRTIFSVHWSRNGIIASGAADDAIRLFVENQEK 298

Query: 484  LSDGPSYKMLLKKENAHDMDVNSVQWSFKENRLLASASDDGTIKIWELASL 332
              D  S+++L KKE AH MDVNSVQWS  E  LLASASDDGTI+IWEL  +
Sbjct: 299  GIDRSSFQLLFKKEKAHSMDVNSVQWSPGEKVLLASASDDGTIRIWELVPI 349


>ref|NP_001242180.1| uncharacterized protein LOC100778826 [Glycine max]
            gi|255637044|gb|ACU18854.1| unknown [Glycine max]
          Length = 352

 Score =  568 bits (1464), Expect = e-159
 Identities = 263/333 (78%), Positives = 294/333 (88%)
 Frame = -3

Query: 1357 ELKEIQKLEGHTDRVWSLAWNPTTGVDGIPAMIASCSGDKTVRIWQQNPSGKQWECKAIL 1178
            ELK IQ+LEGHTD+VWSLAWNPTTG  GIP + ASCSGDKTVRIW+QN S   W C A+L
Sbjct: 3    ELKGIQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVL 62

Query: 1177 DETHTRTVRSCDWSPTGKLLATASFDATTAIWEHIGDDFECVATLEGHENEVKSVSWNSS 998
            DETHTRTVRSC WSP+GKLLATASFDATTAIWE++G DFECV+TLEGHENEVK VSWN++
Sbjct: 63   DETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVSTLEGHENEVKCVSWNAA 122

Query: 997  GSLLATCSRDKSVWIWEVLPGNEFECVSVLQGHTQDVKMVQWHPSMDVLFSCSYDNTIKV 818
            G+LLATCSRDKSVWIWEVLPGNEFECVSVLQGH+QDVKMV+WHP+ D+LFSCSYDN++KV
Sbjct: 123  GTLLATCSRDKSVWIWEVLPGNEFECVSVLQGHSQDVKMVKWHPTEDILFSCSYDNSVKV 182

Query: 817  WAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFNSSGNKMVTCSDDLTLKVWGTDSVSKQI 638
            WA++GDSDDW C+QTL EPNNGH+STVWALSFN SG+KMVTCSDDLTLKVW T+SV  Q 
Sbjct: 183  WADEGDSDDWQCVQTLGEPNNGHTSTVWALSFNVSGDKMVTCSDDLTLKVWETESVGTQ- 241

Query: 637  HGDDFVPWRHLCTLSGLHDRTIFSVHWSREGVIASGAADDTIRLFVEDNDSLSDGPSYKM 458
             G  F PW HLCTLSG HDRTIFSVHWSREG+ ASGAAD+ IRLFV+DN+S   GP YK+
Sbjct: 242  SGGGFAPWTHLCTLSGYHDRTIFSVHWSREGIFASGAADNAIRLFVDDNESQVGGPLYKL 301

Query: 457  LLKKENAHDMDVNSVQWSFKENRLLASASDDGT 359
            LLKKE AHDMD+NSVQWS  E  +LASASDDGT
Sbjct: 302  LLKKEKAHDMDINSVQWSPGEKPVLASASDDGT 334



 Score =  108 bits (271), Expect = 3e-21
 Identities = 73/250 (29%), Positives = 136/250 (54%), Gaps = 9/250 (3%)
 Frame = -3

Query: 1054 VATLEGHENEVKSVSWNSSGS------LLATCSRDKSVWIWEV-LPGNEFECVSVL-QGH 899
            +  LEGH ++V S++WN +        + A+CS DK+V IWE  L    + C +VL + H
Sbjct: 7    IQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVLDETH 66

Query: 898  TQDVKMVQWHPSMDVLFSCSYDNTIKVWAEDGDSDDWDCLQTLDEPNNGHSSTVWALSFN 719
            T+ V+   W PS  +L + S+D T  +W   G   D++C+ TL+    GH + V  +S+N
Sbjct: 67   TRTVRSCAWSPSGKLLATASFDATTAIWENVGG--DFECVSTLE----GHENEVKCVSWN 120

Query: 718  SSGNKMVTCSDDLTLKVWGTDSVSKQIHGDDFVPWRHLCTLSGLHDRTIFSVHWS-REGV 542
            ++G  + TCS D ++ +W      + + G++F     +  L G H + +  V W   E +
Sbjct: 121  AAGTLLATCSRDKSVWIW------EVLPGNEF---ECVSVLQG-HSQDVKMVKWHPTEDI 170

Query: 541  IASGAADDTIRLFVEDNDSLSDGPSYKMLLKKENAHDMDVNSVQWSFKENRLLASASDDG 362
            + S + D++++++ ++ DS  D    + L +  N H   V ++ ++   ++++ + SDD 
Sbjct: 171  LFSCSYDNSVKVWADEGDS-DDWQCVQTLGEPNNGHTSTVWALSFNVSGDKMV-TCSDDL 228

Query: 361  TIKIWELASL 332
            T+K+WE  S+
Sbjct: 229  TLKVWETESV 238


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