BLASTX nr result
ID: Cimicifuga21_contig00005923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005923
(1435 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 ... 582 e-164
ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isofo... 551 e-154
ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|1... 543 e-152
ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glyc... 543 e-152
ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group] g... 537 e-150
>ref|XP_002264694.1| PREDICTED: protein RMD5 homolog A isoform 1 [Vitis vinifera]
gi|359475593|ref|XP_003631711.1| PREDICTED: protein RMD5
homolog A isoform 2 [Vitis vinifera]
gi|296088090|emb|CBI35449.3| unnamed protein product
[Vitis vinifera]
Length = 383
Score = 582 bits (1500), Expect = e-164
Identities = 290/385 (75%), Positives = 330/385 (85%), Gaps = 1/385 (0%)
Frame = -1
Query: 1366 MELGSIRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDSASLDACNSILTE 1187
MEL +I+DAFDRVAKKQKLSSSK+QEVIDQVG+EIE ALAKLQA D AS SIL E
Sbjct: 1 MELSNIKDAFDRVAKKQKLSSSKSQEVIDQVGREIEDALAKLQA--DPASPVDQKSILME 58
Query: 1186 LNGKLKEVAPLNQLEGSQKELNVGLSKYAKLLEKTFNPDISKAYRNVDFDLQAINQIIAC 1007
L KL + +QLEGSQKELN+ LSKY +LLEK+FNPDISKAYRNVDFD +NQIIA
Sbjct: 59 LKTKLSIIGSQSQLEGSQKELNMNLSKYPRLLEKSFNPDISKAYRNVDFDFHTVNQIIAS 118
Query: 1006 HFYRQGLFDLGDCFMNETKEPE-VSLKSPFMEMYQILEAMRSRNLEPAIKWATTHQDHLV 830
HFYRQGLFD+G+C +NE EPE +LKS F+EM+QIL+AM++R+LEPA+ W + +++ L
Sbjct: 119 HFYRQGLFDIGECLINEAGEPEDTALKSQFLEMFQILDAMKARDLEPALNWVSNNREKLK 178
Query: 829 QNGSILELKLHRLQFLEILQKGTRGDALNYARTYLPPFATVHMTEIQKLMACLLWAGRLD 650
QNGS LELKLHRLQF+EILQKG R DALNYARTYL PFA++HM EIQKLMACLLW GRLD
Sbjct: 179 QNGSNLELKLHRLQFVEILQKGGRADALNYARTYLAPFASLHMDEIQKLMACLLWVGRLD 238
Query: 649 CSPYAEFLSPTHWEKLAEELTQQFCNFLGQSYESPLNVVIEAGIQGLPTLLKLANVMAAK 470
SPY+E + P+ WEKLAEELT+QFC+ LGQSYESPL+V I AGI+GLPTLLKLANVMAAK
Sbjct: 239 SSPYSELMVPSLWEKLAEELTRQFCSLLGQSYESPLSVAIAAGIEGLPTLLKLANVMAAK 298
Query: 469 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQASDENPPMLMPCGHVLCRQSIVKLSK 290
KQEW AMKQLPVP+DLGREFQFHSIFVCPVSRDQ S+ENPPMLMPCGHVLC+QSI+KLSK
Sbjct: 299 KQEWQAMKQLPVPVDLGREFQFHSIFVCPVSRDQGSEENPPMLMPCGHVLCKQSIMKLSK 358
Query: 289 GSTRTFKCPYCPLEATVAQCRQLYF 215
STR FKCPYCP E+TV QC QLYF
Sbjct: 359 SSTRMFKCPYCPNESTVGQCMQLYF 383
>ref|XP_003543119.1| PREDICTED: protein RMD5 homolog A-like isoform 1 [Glycine max]
gi|356549477|ref|XP_003543120.1| PREDICTED: protein RMD5
homolog A-like isoform 2 [Glycine max]
Length = 385
Score = 551 bits (1421), Expect = e-154
Identities = 269/385 (69%), Positives = 317/385 (82%), Gaps = 1/385 (0%)
Frame = -1
Query: 1366 MELGSIRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDSASLDACNSILTE 1187
MEL SI+DAFDRVAKKQKLSSSK+QEV+DQVG EIEQALA +Q+ HD ++ S+LTE
Sbjct: 1 MELSSIKDAFDRVAKKQKLSSSKSQEVVDQVGCEIEQALATIQSSHDPSAPVDQKSVLTE 60
Query: 1186 LNGKLKEVAPLNQLEGSQKELNVGLSKYAKLLEKTFNPDISKAYRNVDFDLQAINQIIAC 1007
L KL + PL QLEGS KELN+ L+KY KLLEK NPDISKAYRNVDFD +NQIIA
Sbjct: 61 LKFKLNAIGPLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIAN 120
Query: 1006 HFYRQGLFDLGDCFMNETKEPEVS-LKSPFMEMYQILEAMRSRNLEPAIKWATTHQDHLV 830
HFY QGLFDLGD +NE EP+ + L+S F+EM+QI+ AMR RNL+PA+ W + +++ LV
Sbjct: 121 HFYHQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180
Query: 829 QNGSILELKLHRLQFLEILQKGTRGDALNYARTYLPPFATVHMTEIQKLMACLLWAGRLD 650
Q GS LELK+H LQF+E+LQ GTR DAL YARTYL PFA+++ E KLM CLL+AGRL+
Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240
Query: 649 CSPYAEFLSPTHWEKLAEELTQQFCNFLGQSYESPLNVVIEAGIQGLPTLLKLANVMAAK 470
SPY+E LSP HWE EELT+QFC LGQSYE+PL+V + AG++GLPTLLKLANVMAAK
Sbjct: 241 SSPYSELLSPIHWEMTTEELTRQFCTLLGQSYENPLSVAVAAGVEGLPTLLKLANVMAAK 300
Query: 469 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQASDENPPMLMPCGHVLCRQSIVKLSK 290
KQEW MKQLPVP++LG+EFQFHSIFVCPVSRDQ S+ENPPML+PC HVLC+QSI+KLSK
Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360
Query: 289 GSTRTFKCPYCPLEATVAQCRQLYF 215
STRTFKCPYCP EATVA C+QLYF
Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385
>ref|XP_002313209.1| predicted protein [Populus trichocarpa] gi|118480973|gb|ABK92440.1|
unknown [Populus trichocarpa] gi|222849617|gb|EEE87164.1|
predicted protein [Populus trichocarpa]
Length = 384
Score = 543 bits (1400), Expect = e-152
Identities = 265/385 (68%), Positives = 322/385 (83%), Gaps = 1/385 (0%)
Frame = -1
Query: 1366 MELGSIRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDSASLDACNSILTE 1187
MEL + +DAFDRVA+KQKLS SK QEVIDQV QEIEQAL K+Q+V D S SILTE
Sbjct: 1 MELTTAKDAFDRVAEKQKLSFSKCQEVIDQVSQEIEQALVKIQSVEDPMSPVDQKSILTE 60
Query: 1186 LNGKLKEVAPLNQLEGSQKELNVGLSKYAKLLEKTFNPDISKAYRNVDFDLQAINQIIAC 1007
L KL ++PL LEGSQKELN+ LSK+ K+LEK+F PDISKAYR+VDFD +NQIIA
Sbjct: 61 LKHKLIAISPLKLLEGSQKELNLNLSKFPKVLEKSF-PDISKAYRDVDFDFHIVNQIIAS 119
Query: 1006 HFYRQGLFDLGDCFMNETKEPEVS-LKSPFMEMYQILEAMRSRNLEPAIKWATTHQDHLV 830
HFY QGLFDLGDC +NE EPE + L+S F+E++QILEAMR +N+EPA+KWA+T+++ LV
Sbjct: 120 HFYHQGLFDLGDCLINEAGEPEAAALRSHFLELHQILEAMRIKNIEPALKWASTNREKLV 179
Query: 829 QNGSILELKLHRLQFLEILQKGTRGDALNYARTYLPPFATVHMTEIQKLMACLLWAGRLD 650
QNGS +ELKLH+LQF+EIL++G R DALNYA+T+L FA+ H+ E QKL+ C++W GRL+
Sbjct: 180 QNGSNIELKLHQLQFVEILKRGNRADALNYAKTHLASFASSHLKEFQKLIVCIMWIGRLE 239
Query: 649 CSPYAEFLSPTHWEKLAEELTQQFCNFLGQSYESPLNVVIEAGIQGLPTLLKLANVMAAK 470
P++E +P HWEKL EEL + FCNF+GQS +SPL+V I AGI+GLPTLLKLANVMAAK
Sbjct: 240 NCPHSELFTPIHWEKLTEELARDFCNFVGQSLQSPLSVAIVAGIEGLPTLLKLANVMAAK 299
Query: 469 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQASDENPPMLMPCGHVLCRQSIVKLSK 290
KQEW A+KQLPVP++LG+EFQFHSIFVCPVSRDQ S+ENPPML+PC HVLC+QSI+KLSK
Sbjct: 300 KQEWQALKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 359
Query: 289 GSTRTFKCPYCPLEATVAQCRQLYF 215
GS+R FKCPYCP EA+ AQCRQLYF
Sbjct: 360 GSSRAFKCPYCPAEASAAQCRQLYF 384
>ref|XP_003545753.1| PREDICTED: protein RMD5 homolog A-like [Glycine max]
Length = 385
Score = 543 bits (1399), Expect = e-152
Identities = 265/385 (68%), Positives = 314/385 (81%), Gaps = 1/385 (0%)
Frame = -1
Query: 1366 MELGSIRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVHDSASLDACNSILTE 1187
MEL SI+DAFDRV KKQK+SSSK+QEV+DQVG+EIEQALA +Q+ HD +S S LTE
Sbjct: 1 MELSSIKDAFDRVTKKQKISSSKSQEVVDQVGREIEQALATIQSPHDPSSPVDQKSALTE 60
Query: 1186 LNGKLKEVAPLNQLEGSQKELNVGLSKYAKLLEKTFNPDISKAYRNVDFDLQAINQIIAC 1007
L KL + L QLEGS KELN+ L+KY KLLEK NPDISKAYRNVDFD ++QIIA
Sbjct: 61 LKFKLNAIGSLQQLEGSNKELNISLTKYQKLLEKLLNPDISKAYRNVDFDTHIVDQIIAN 120
Query: 1006 HFYRQGLFDLGDCFMNETKEPEVS-LKSPFMEMYQILEAMRSRNLEPAIKWATTHQDHLV 830
HFYRQGLFDLGD +NE EP+ + L+S F+EM+QI+ AMR RNL+PA+ W + +++ LV
Sbjct: 121 HFYRQGLFDLGDSIINEAGEPDAAALRSQFLEMHQIIGAMRERNLQPALTWVSANREKLV 180
Query: 829 QNGSILELKLHRLQFLEILQKGTRGDALNYARTYLPPFATVHMTEIQKLMACLLWAGRLD 650
Q GS LELK+H LQF+E+LQ GTR DAL YARTYL PFA+++ E KLM CLL+AGRL+
Sbjct: 181 QIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKGEFPKLMGCLLYAGRLE 240
Query: 649 CSPYAEFLSPTHWEKLAEELTQQFCNFLGQSYESPLNVVIEAGIQGLPTLLKLANVMAAK 470
SPY+E LSP HWE EEL +QFC LGQSYE+PL+V + AG++GLP LLKLANVMAAK
Sbjct: 241 SSPYSELLSPIHWEMTTEELARQFCTLLGQSYENPLSVAVAAGVEGLPILLKLANVMAAK 300
Query: 469 KQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQASDENPPMLMPCGHVLCRQSIVKLSK 290
KQEW MKQLPVP++LG+EFQFHSIFVCPVSRDQ S+ENPPML+PC HVLC+QSI+KLSK
Sbjct: 301 KQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSK 360
Query: 289 GSTRTFKCPYCPLEATVAQCRQLYF 215
STRTFKCPYCP EATVA C+QLYF
Sbjct: 361 NSTRTFKCPYCPAEATVANCKQLYF 385
>ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group]
gi|50725427|dbj|BAD32899.1| membrane protein-like [Oryza
sativa Japonica Group] gi|50726574|dbj|BAD34208.1|
membrane protein-like [Oryza sativa Japonica Group]
gi|113595999|dbj|BAF19873.1| Os06g0588900 [Oryza sativa
Japonica Group] gi|125555894|gb|EAZ01500.1| hypothetical
protein OsI_23531 [Oryza sativa Indica Group]
gi|125597714|gb|EAZ37494.1| hypothetical protein
OsJ_21828 [Oryza sativa Japonica Group]
Length = 386
Score = 537 bits (1383), Expect = e-150
Identities = 266/386 (68%), Positives = 313/386 (81%), Gaps = 2/386 (0%)
Frame = -1
Query: 1366 MELGSIRDAFDRVAKKQKLSSSKTQEVIDQVGQEIEQALAKLQAVH-DSASLDACNSILT 1190
MEL S+R+AFDRV +K+ SS+K QEVIDQ+ E+EQA+ K+Q ++ DS +SIL
Sbjct: 1 MELDSLREAFDRVIEKRASSSAKAQEVIDQIVSEVEQAITKMQMMNTDSMGTADHSSILA 60
Query: 1189 ELNGKLKEVAPLNQLEGSQKELNVGLSKYAKLLEKTFNPDISKAYRNVDFDLQAINQIIA 1010
EL KL E+APLNQLEG QKELNV LSKY KLLEK+F+PDISKAYRNVDF+ IN IIA
Sbjct: 61 ELKAKLNELAPLNQLEGCQKELNVALSKYLKLLEKSFSPDISKAYRNVDFEASTINSIIA 120
Query: 1009 CHFYRQGLFDLGDCFMNETKEPE-VSLKSPFMEMYQILEAMRSRNLEPAIKWATTHQDHL 833
HFYRQGLFDLGD F+ E E + LK F EMY ILEAM+ RNL+PA+ WA + D L
Sbjct: 121 NHFYRQGLFDLGDSFVRECGESDGAHLKLQFQEMYSILEAMQVRNLQPALSWAAKNHDQL 180
Query: 832 VQNGSILELKLHRLQFLEILQKGTRGDALNYARTYLPPFATVHMTEIQKLMACLLWAGRL 653
+QNGS+LELKLH+LQF+EIL KG+R +AL YART+L PFA++H EIQKLMACLLWA RL
Sbjct: 181 LQNGSMLELKLHQLQFVEILTKGSRDEALKYARTHLVPFASLHKAEIQKLMACLLWADRL 240
Query: 652 DCSPYAEFLSPTHWEKLAEELTQQFCNFLGQSYESPLNVVIEAGIQGLPTLLKLANVMAA 473
D SPYAEF+S THWEKLAEELT QFC+ LGQS ESPL V + AG QGLPTLLKL VMAA
Sbjct: 241 DQSPYAEFMSSTHWEKLAEELTHQFCSLLGQSSESPLGVAVSAGFQGLPTLLKLTTVMAA 300
Query: 472 KKQEWLAMKQLPVPLDLGREFQFHSIFVCPVSRDQASDENPPMLMPCGHVLCRQSIVKLS 293
KKQEW AMKQLPVP+D+G EFQ+HS+FVCPV R+Q+SDENPPMLMPCGHV+ +QSI+KLS
Sbjct: 301 KKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDENPPMLMPCGHVVSKQSIMKLS 360
Query: 292 KGSTRTFKCPYCPLEATVAQCRQLYF 215
K S+R FKCPYCP EA +QC+QL+F
Sbjct: 361 KSSSRPFKCPYCPSEAVASQCKQLHF 386