BLASTX nr result

ID: Cimicifuga21_contig00005919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005919
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326694.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002329544.1| predicted protein [Populus trichocarpa] gi|2...   126   6e-27
ref|XP_002517517.1| conserved hypothetical protein [Ricinus comm...   123   5e-26
gb|AFK48841.1| unknown [Lotus japonicus]                              114   3e-23
ref|XP_003517388.1| PREDICTED: uncharacterized protein LOC100797...   112   1e-22

>ref|XP_002326694.1| predicted protein [Populus trichocarpa] gi|222834016|gb|EEE72493.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  135 bits (340), Expect = 1e-29
 Identities = 76/157 (48%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
 Frame = -2

Query: 688 RRPCFVEDDVGLASLAITE--NNNQNTPFFTRARKXXXXXXXXXXXXXXXXXXXXXXSTR 515
           RRPCF+++D GLASLA  E  ++  + PFF+R+                        S R
Sbjct: 7   RRPCFIDEDDGLASLADMEAGSSGNHHPFFSRS----LCYARRGSFRNLSSLVSSPRSAR 62

Query: 514 FYEARCKDHQLPHFLEACFLCKKSLGENRDIFMYRGDTPFCSXXXXXXXXXXXEAKEKNW 335
           + ++R +DHQ PHFLEACFLCKKSLG+NRDIFMYRGDTPFCS           EA EKNW
Sbjct: 63  YCDSRYEDHQ-PHFLEACFLCKKSLGDNRDIFMYRGDTPFCSEECRQEQIDIDEANEKNW 121

Query: 334 KFTNSMNTIRKEKQKQTKSTPNQSQNYQARTSTVAAA 224
             ++SM  +RK+ QK++ S P ++Q+Y +RT TVAAA
Sbjct: 122 NLSSSMKALRKKDQKKSTS-PTKAQDYPSRTGTVAAA 157


>ref|XP_002329544.1| predicted protein [Populus trichocarpa] gi|222870253|gb|EEF07384.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  126 bits (316), Expect = 6e-27
 Identities = 73/156 (46%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
 Frame = -2

Query: 688 RRPCFVEDDVGLASLAITEN--NNQNTPFFTRARKXXXXXXXXXXXXXXXXXXXXXXSTR 515
           +RPCF+E+D GLASLA      +  + PFF+R+                        S R
Sbjct: 7   KRPCFIEEDDGLASLADMGAGFSGNHHPFFSRS----LCYARRCSFRNLSSLVPSPRSAR 62

Query: 514 FYEARCKDHQLPHFLEACFLCKKSLGENRDIFMYRGDTPFCSXXXXXXXXXXXEAKEKNW 335
           F ++R  DHQ PHFLEACFLCKK LG+NRDIFMYRGD PFCS           EAKEKNW
Sbjct: 63  FCDSRFDDHQ-PHFLEACFLCKKPLGDNRDIFMYRGDMPFCSEECRQEQIDIDEAKEKNW 121

Query: 334 KFTNSMNTIRKEKQKQTKSTPNQSQNYQARTSTVAA 227
             ++SM  +RK  QK++ S P ++Q+Y +R  TVAA
Sbjct: 122 NLSSSMKALRKNDQKKSTS-PTKAQDYSSRAGTVAA 156


>ref|XP_002517517.1| conserved hypothetical protein [Ricinus communis]
           gi|223543528|gb|EEF45059.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  123 bits (308), Expect = 5e-26
 Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
 Frame = -2

Query: 688 RRPCFVEDDVGLASLAITE---NNNQNT-------PFFTRARKXXXXXXXXXXXXXXXXX 539
           R P F+E+D GL SLA  E   + NQ         PFF+R+                   
Sbjct: 9   RVPYFIEEDDGLVSLADMEAGFSGNQQQQQQKHQHPFFSRS----LCYGKEGSMRTISSS 64

Query: 538 XXXXXSTRFYEARCKDHQLPHFLEACFLCKKSLGENRDIFMYRGDTPFCSXXXXXXXXXX 359
                S RFY+AR +DHQ PHFLEACFLCKK LG+NRDIFMYRGDTPFCS          
Sbjct: 65  ISSPRSARFYDARFEDHQ-PHFLEACFLCKKPLGDNRDIFMYRGDTPFCSEECRQEQIEI 123

Query: 358 XEAKEKNWKFTNSMNTIRKEKQKQTKSTPNQSQNYQARTSTVAAA 224
            EAK+KNW   +SM  +RK+ +K++  +P ++Q+Y +RT  VAAA
Sbjct: 124 DEAKDKNWNL-SSMKKLRKKDKKRSSISPTKAQDYPSRTGAVAAA 167


>gb|AFK48841.1| unknown [Lotus japonicus]
          Length = 159

 Score =  114 bits (284), Expect = 3e-23
 Identities = 69/157 (43%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
 Frame = -2

Query: 685 RPCFVEDDVGLASLAITENNNQ--NTPFFTRARKXXXXXXXXXXXXXXXXXXXXXXST-- 518
           RPC++E D GLASL   ++  +  +T F +R+                            
Sbjct: 6   RPCYLEKDHGLASLPDMDSGYRVNSTSFVSRSSMTSGYGYATSCNRGSFRNLSVSSPRSG 65

Query: 517 RFYEARCKDHQLPHFLEACFLCKKSLGENRDIFMYRGDTPFCSXXXXXXXXXXXEAKEKN 338
           RFY++R +DHQ PHFLEACFLCKKSLG+NRDIFMYRGDTPFCS           EAKEKN
Sbjct: 66  RFYDSRFEDHQ-PHFLEACFLCKKSLGDNRDIFMYRGDTPFCSEECRQEQIEIDEAKEKN 124

Query: 337 WKFTNSMNTIRKEKQKQTKSTPNQSQNYQARTSTVAA 227
            K  +SM  +R ++Q+ + S PN++++Y  R + VAA
Sbjct: 125 MK-ASSMKALRSKEQRNSAS-PNKARDYSFRATGVAA 159


>ref|XP_003517388.1| PREDICTED: uncharacterized protein LOC100797178 [Glycine max]
          Length = 156

 Score =  112 bits (279), Expect = 1e-22
 Identities = 57/98 (58%), Positives = 71/98 (72%)
 Frame = -2

Query: 517 RFYEARCKDHQLPHFLEACFLCKKSLGENRDIFMYRGDTPFCSXXXXXXXXXXXEAKEKN 338
           RFY+AR +DHQ PHFL+AC LCKK LG+NRDIFMYRGDTPFCS           EAKEKN
Sbjct: 61  RFYDARFEDHQ-PHFLQACSLCKKPLGDNRDIFMYRGDTPFCSEECRQEQIERDEAKEKN 119

Query: 337 WKFTNSMNTIRKEKQKQTKSTPNQSQNYQARTSTVAAA 224
              ++SM  +RK++Q+ + S PN++Q+Y  R  TVAAA
Sbjct: 120 KNLSSSMKALRKKEQRNSVS-PNKTQDYSFRAGTVAAA 156


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