BLASTX nr result

ID: Cimicifuga21_contig00005854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005854
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...    73   3e-11
ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...    70   2e-10
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    70   2e-10
ref|XP_003620798.1| hypothetical protein MTR_6g090580 [Medicago ...    70   3e-10
ref|XP_003620733.1| hypothetical protein MTR_6g089780 [Medicago ...    70   3e-10

>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Cucumis sativus]
           gi|449520010|ref|XP_004167027.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like [Cucumis
           sativus]
          Length = 404

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/58 (63%), Positives = 43/58 (74%)
 Frame = +1

Query: 409 TKLFEVSPNRSLWLTSFRGSLPTFLSAQTQAQXXXXXXXXXXXXKEIISLFASLQTQL 582
           +KLFEVSPNRSLWLT+FRGSLPTFL++QTQ+             KEI+SLF  LQTQL
Sbjct: 76  SKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQL 133


>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/58 (62%), Positives = 42/58 (72%)
 Frame = +1

Query: 409 TKLFEVSPNRSLWLTSFRGSLPTFLSAQTQAQXXXXXXXXXXXXKEIISLFASLQTQL 582
           ++LFEVSPNRSLWLTSFRG+LPTFLS+Q+               KEI+SLF SLQTQL
Sbjct: 81  SRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILSLFTSLQTQL 138


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/58 (62%), Positives = 42/58 (72%)
 Frame = +1

Query: 409  TKLFEVSPNRSLWLTSFRGSLPTFLSAQTQAQXXXXXXXXXXXXKEIISLFASLQTQL 582
            ++LFEVSPNRSLWLTSFRG+LPTFLS+Q+               KEI+SLF SLQTQL
Sbjct: 1115 SRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILSLFTSLQTQL 1172


>ref|XP_003620798.1| hypothetical protein MTR_6g090580 [Medicago truncatula]
           gi|355495813|gb|AES77016.1| hypothetical protein
           MTR_6g090580 [Medicago truncatula]
          Length = 538

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = +1

Query: 409 TKLFEVSPNRSLWLTSFRGSLPTFLSAQTQAQXXXXXXXXXXXXKEIISLFASLQTQL 582
           TKLFEVSPN+SLW+++FRGSLPTFLS+Q Q +            KEI+SLF +LQTQ+
Sbjct: 74  TKLFEVSPNKSLWVSAFRGSLPTFLSSQGQPRSSASLDSSPSTTKEILSLFTNLQTQM 131


>ref|XP_003620733.1| hypothetical protein MTR_6g089780 [Medicago truncatula]
           gi|355495748|gb|AES76951.1| hypothetical protein
           MTR_6g089780 [Medicago truncatula]
          Length = 579

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = +1

Query: 409 TKLFEVSPNRSLWLTSFRGSLPTFLSAQTQAQXXXXXXXXXXXXKEIISLFASLQTQL 582
           TKLFEVSPN+SLW+++FRGSLPTFLS+Q Q +            KEI+SLF +LQTQ+
Sbjct: 74  TKLFEVSPNKSLWVSAFRGSLPTFLSSQGQPRSSASLDSSPSTTKEILSLFTNLQTQM 131


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