BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005850
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   332   7e-89
ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   324   2e-86
ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin...   321   2e-85
ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-ter...   313   3e-83

>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  332 bits (852), Expect = 7e-89
 Identities = 159/195 (81%), Positives = 179/195 (91%)
 Frame = -3

Query: 954 MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSIREPNVYEFGTPYKQ 775
           MKFRYAMVCSSNQNRSMEAHSLLK+QGFDVSSYGTGAHVKLPGPS+REPNVYEFGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 774 MFEDLRRKDSELYKRNGILQMLKRNLGVKLAPQRWQENASDGTFDVVFTFEEKVFDMVIE 595
           MF+DLRRKD +LYKRNGIL MLKRN  VK APQRWQ+NA+DG FDVVFTFEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVE 120

Query: 594 DLHNREHVRMKAVLVINLEVKDNHEEAAVGAKLTLDFCKELEATDSWEDNIDTIISSFVE 415
           DLHNR+HV MK VLVINLEVKDNHEEAA+GA+L LD C+E+EAT+SWED++D ++S F E
Sbjct: 121 DLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGF-E 179

Query: 414 RQHNRQKVWYSISFY 370
           +QH R+K+ YSISFY
Sbjct: 180 KQH-RRKLLYSISFY 193


>ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|222869112|gb|EEF06243.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  328 bits (840), Expect = 2e-87
 Identities = 159/195 (81%), Positives = 181/195 (92%)
 Frame = -3

Query: 954 MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSIREPNVYEFGTPYKQ 775
           MKFRYAMVCSSNQNRSMEAHSLLKR GFDVSSYGTGAHVKLPGPS+REPNVY+FGTPYKQ
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 774 MFEDLRRKDSELYKRNGILQMLKRNLGVKLAPQRWQENASDGTFDVVFTFEEKVFDMVIE 595
           MF+DLRRKD ELYKRNGIL MLKRN GVKLAPQRWQ+NA+DG+F VVFTFEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLE 120

Query: 594 DLHNREHVRMKAVLVINLEVKDNHEEAAVGAKLTLDFCKELEATDSWEDNIDTIISSFVE 415
           DLHNR+HV +K+VLVINLEVKDNHEEAAVG +LTL+ C+++EA +SWED+ID II++F E
Sbjct: 121 DLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAF-E 179

Query: 414 RQHNRQKVWYSISFY 370
            +H R+K+ YSISFY
Sbjct: 180 AKH-RRKLVYSISFY 193


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  324 bits (831), Expect = 2e-86
 Identities = 156/195 (80%), Positives = 180/195 (92%)
 Frame = -3

Query: 954 MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSIREPNVYEFGTPYKQ 775
           MK RYAMVCSSNQNRSMEAHSLLK QGFDVSSYGTGAHVKLPGPS+REPNVY+FGTPYKQ
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 774 MFEDLRRKDSELYKRNGILQMLKRNLGVKLAPQRWQENASDGTFDVVFTFEEKVFDMVIE 595
           MF+DLRRKD +LYKRNGIL MLKRN  VKLAPQRWQ+NA+DG+FDVVF+FEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 594 DLHNREHVRMKAVLVINLEVKDNHEEAAVGAKLTLDFCKELEATDSWEDNIDTIISSFVE 415
           DLHNR+HV M++VLVINLEVKDNHEEAA+GA+L L+ C+E+EA +SWED+ID II++F E
Sbjct: 121 DLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAF-E 179

Query: 414 RQHNRQKVWYSISFY 370
            +H R+K+ YS+SFY
Sbjct: 180 TKH-RRKLLYSVSFY 193


>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
           gi|255628381|gb|ACU14535.1| unknown [Glycine max]
          Length = 193

 Score =  321 bits (823), Expect = 2e-85
 Identities = 157/195 (80%), Positives = 175/195 (89%)
 Frame = -3

Query: 954 MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSIREPNVYEFGTPYKQ 775
           MKFRYAMVCSSNQNRSMEAH LLKRQGFDVSSYGTGAHVKLPGPS+REPNVY+FGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 774 MFEDLRRKDSELYKRNGILQMLKRNLGVKLAPQRWQENASDGTFDVVFTFEEKVFDMVIE 595
           M EDLRRKD +LYKRNGI  MLKRN  VKLAPQRWQENA+DG+FDVV TFEEKVFDMVIE
Sbjct: 61  MIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIE 120

Query: 594 DLHNREHVRMKAVLVINLEVKDNHEEAAVGAKLTLDFCKELEATDSWEDNIDTIISSFVE 415
           DLHNR+H  +K VLVINLEVKDNH+EAAVGA+LTLD C+E+EA +SWE++ID II+ F E
Sbjct: 121 DLHNRDHALLKTVLVINLEVKDNHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGF-E 179

Query: 414 RQHNRQKVWYSISFY 370
            +H R+K+ YSISFY
Sbjct: 180 NKH-RRKLLYSISFY 193


>ref|XP_004137380.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72-like [Cucumis sativus]
           gi|449506693|ref|XP_004162820.1| PREDICTED: RNA
           polymerase II subunit A C-terminal domain phosphatase
           SSU72-like [Cucumis sativus]
          Length = 193

 Score =  313 bits (803), Expect = 3e-83
 Identities = 148/195 (75%), Positives = 173/195 (88%)
 Frame = -3

Query: 954 MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSIREPNVYEFGTPYKQ 775
           MK+RYAMVCSSNQNRSMEAHS+LK +GF+VSSYGTGAHVKLPGPS+REPNVY+FGTPYK 
Sbjct: 1   MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 774 MFEDLRRKDSELYKRNGILQMLKRNLGVKLAPQRWQENASDGTFDVVFTFEEKVFDMVIE 595
           MF+DLRRKD ELYKRNGIL MLKRN  VK APQRWQ+NA+DG+FDVVFTFEEKVFDMVIE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIE 120

Query: 594 DLHNREHVRMKAVLVINLEVKDNHEEAAVGAKLTLDFCKELEATDSWEDNIDTIISSFVE 415
           DL+ R+H  MK VL++NLEVKDNHEEAA+GA+LT D C+E+E T+SWED+ID I+ +F  
Sbjct: 121 DLNTRDHAMMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVINF-- 178

Query: 414 RQHNRQKVWYSISFY 370
            +  R+K+ YSISFY
Sbjct: 179 EKQLRRKLLYSISFY 193