BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005733
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   157   2e-36
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   157   3e-36
ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [S...   156   4e-36
ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group] g...   156   5e-36

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  158 bits (400), Expect = 1e-36
 Identities = 76/116 (65%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
 Frame = -3

Query: 606 RVSLMEFCPTCGNMLQYEPANIGRKARLFCPTCPYVCAIENK--IKRRQPLVKKVIEPIF 433
           R+  MEFCPTCGN LQYE  ++GR AR FCPTCPYVC IE K  IKR+Q LVKK IEPIF
Sbjct: 61  RLQQMEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIF 120

Query: 432 SGADALENAPKTEANCPSCNHGKAYFTQFQTRSADEPMTIFYRCCNADCKHTWRED 265
           S  D ++N P T+A CP CN GKA F Q QTRSADEPM+ FY C N +C   WRED
Sbjct: 121 S-KDDMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  157 bits (398), Expect = 2e-36
 Identities = 74/111 (66%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
 Frame = -3

Query: 594 MEFCPTCGNMLQYEPANIGRKARLFCPTCPYVCAIENK--IKRRQPLVKKVIEPIFSGAD 421
           MEFCP+CGNMLQYE   +GR +R FC  CPYVC IEN+  IKR+Q LV+K IEPIFS  D
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFS-ED 59

Query: 420 ALENAPKTEANCPSCNHGKAYFTQFQTRSADEPMTIFYRCCNADCKHTWRE 268
            + NAP TEA CP C HGKA F +FQTRSADEP T+FY+C N DCK  WRE
Sbjct: 60  DMTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  157 bits (396), Expect = 3e-36
 Identities = 75/112 (66%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
 Frame = -3

Query: 594 MEFCPTCGNMLQYEPANIGRKARLFCPTCPYVCAIENK--IKRRQPLVKKVIEPIFSGAD 421
           MEFCPTCGN LQYE  ++GR AR FCPTCPYVC IE K  IKR+Q LVKK IEPIFS  D
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFS-KD 59

Query: 420 ALENAPKTEANCPSCNHGKAYFTQFQTRSADEPMTIFYRCCNADCKHTWRED 265
            ++N P T+A CP CN GKA F Q QTRSADEPM+ FY C N +C   WRED
Sbjct: 60  DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111


>ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [Sorghum bicolor]
           gi|241934323|gb|EES07468.1| hypothetical protein
           SORBIDRAFT_04g032090 [Sorghum bicolor]
          Length = 166

 Score =  156 bits (395), Expect = 4e-36
 Identities = 66/110 (60%), Positives = 79/110 (71%)
 Frame = -3

Query: 594 MEFCPTCGNMLQYEPANIGRKARLFCPTCPYVCAIENKIKRRQPLVKKVIEPIFSGADAL 415
           MEFCP CG +LQ +P     + RLFC  CPYVC I+NKI ++  LVKK +EPIFS AD +
Sbjct: 57  MEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQNKIVKKARLVKKEVEPIFSTADEM 116

Query: 414 ENAPKTEANCPSCNHGKAYFTQFQTRSADEPMTIFYRCCNADCKHTWRED 265
           ++APKT   C  CNHG+AYF Q Q RSADEPMT  YRCC  +C+H WRED
Sbjct: 117 KSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 166


>ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group]
           gi|50251233|dbj|BAD27819.1| putative DNA-directed RNA
           polymerase III [Oryza sativa Japonica Group]
           gi|50251924|dbj|BAD27861.1| putative DNA-directed RNA
           polymerase II [Oryza sativa Japonica Group]
           gi|113537239|dbj|BAF09622.1| Os02g0672700 [Oryza sativa
           Japonica Group] gi|215708708|dbj|BAG93977.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765354|dbj|BAG87051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 110

 Score =  156 bits (394), Expect = 5e-36
 Identities = 64/110 (58%), Positives = 83/110 (75%)
 Frame = -3

Query: 594 MEFCPTCGNMLQYEPANIGRKARLFCPTCPYVCAIENKIKRRQPLVKKVIEPIFSGADAL 415
           MEFCP CG +LQ +PA  G + R +CPTCPYVC ++NKI ++  LVKK +EPIFS +DA+
Sbjct: 1   MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKNKIVKKARLVKKEVEPIFSDSDAM 60

Query: 414 ENAPKTEANCPSCNHGKAYFTQFQTRSADEPMTIFYRCCNADCKHTWRED 265
           +NAPKT   CP C +G+AY+ Q Q RSADEPM+ FY+CC  +C+  WRED
Sbjct: 61  KNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 110