BLASTX nr result

ID: Cimicifuga21_contig00005725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005725
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   228   1e-57
ref|XP_002518112.1| conserved hypothetical protein [Ricinus comm...   224   1e-56
ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   224   2e-56
ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   223   4e-56
ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   220   2e-55

>ref|XP_002271288.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial isoform 1 [Vitis vinifera]
          Length = 125

 Score =  228 bits (580), Expect = 1e-57
 Identities = 107/125 (85%), Positives = 117/125 (93%)
 Frame = +2

Query: 32  MAGRLSNIASRITGGNGVVGRSITNSLRLRAGMGLPVGRHIVPSKPLPVNDELVWDNGTS 211
           MAGRLSN+ASRI GG+GVV RS+ +SL LR+GMGLPVG+HIVP+KPLPVNDEL+WDNGT 
Sbjct: 1   MAGRLSNVASRIMGGSGVVSRSVASSLPLRSGMGLPVGKHIVPNKPLPVNDELIWDNGTP 60

Query: 212 TPEPCIDRIAETVGKYEALAWLCGGLSFFASLGALAVLNDKASKIPFTPKVYPYDNLRVE 391
            PEPCIDRIAETVGKYEALAW+CGGLSFFASLG LAV NDKASKIPFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIAETVGKYEALAWMCGGLSFFASLGLLAVWNDKASKIPFTPRVYPYDNLRVE 120

Query: 392 LGGEP 406
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_002518112.1| conserved hypothetical protein [Ricinus communis]
           gi|223542708|gb|EEF44245.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score =  224 bits (572), Expect = 1e-56
 Identities = 107/124 (86%), Positives = 114/124 (91%)
 Frame = +2

Query: 35  AGRLSNIASRITGGNGVVGRSITNSLRLRAGMGLPVGRHIVPSKPLPVNDELVWDNGTST 214
           AGRLSN+ASRI GGNGVV RSI +SLRLR+GMGLPVG+HIVP KPLPVN+ELVWDNGT  
Sbjct: 3   AGRLSNVASRIMGGNGVVSRSIGSSLRLRSGMGLPVGKHIVPDKPLPVNEELVWDNGTPF 62

Query: 215 PEPCIDRIAETVGKYEALAWLCGGLSFFASLGALAVLNDKASKIPFTPKVYPYDNLRVEL 394
           PEPCIDRIA+TVGKYEALAWLCGGLSFFASLG LAV NDKASKIP+ PKVYPYDNLR EL
Sbjct: 63  PEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPYVPKVYPYDNLRAEL 122

Query: 395 GGEP 406
           GGEP
Sbjct: 123 GGEP 126


>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  224 bits (571), Expect = 2e-56
 Identities = 106/125 (84%), Positives = 116/125 (92%)
 Frame = +2

Query: 32  MAGRLSNIASRITGGNGVVGRSITNSLRLRAGMGLPVGRHIVPSKPLPVNDELVWDNGTS 211
           MAGRL+N ASRI GGNGVV RS+ +SLRLR+GMGLPVG+H VP KPLP+N+EL+WDNGT+
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 212 TPEPCIDRIAETVGKYEALAWLCGGLSFFASLGALAVLNDKASKIPFTPKVYPYDNLRVE 391
            PEPCIDRIA+TVGKYEALAWLCGGLSFFASLG LAV NDKASKIPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 392 LGGEP 406
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Cucumis sativus]
           gi|449519396|ref|XP_004166721.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
           mitochondrial-like [Cucumis sativus]
          Length = 127

 Score =  223 bits (568), Expect = 4e-56
 Identities = 105/125 (84%), Positives = 114/125 (91%)
 Frame = +2

Query: 32  MAGRLSNIASRITGGNGVVGRSITNSLRLRAGMGLPVGRHIVPSKPLPVNDELVWDNGTS 211
           MAG+L+N+ S+I GGNGVVGRSI +SLRLR+GMGLPVG+HIVP KPLP NDELVWDNGT 
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 212 TPEPCIDRIAETVGKYEALAWLCGGLSFFASLGALAVLNDKASKIPFTPKVYPYDNLRVE 391
            PEPCIDRIA+TVGKYEALAWLCGGL FFASLG LAV NDKASKIPF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 392 LGGEP 406
           LGG+P
Sbjct: 121 LGGDP 125


>ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Glycine max]
          Length = 125

 Score =  220 bits (561), Expect = 2e-55
 Identities = 104/125 (83%), Positives = 114/125 (91%)
 Frame = +2

Query: 32  MAGRLSNIASRITGGNGVVGRSITNSLRLRAGMGLPVGRHIVPSKPLPVNDELVWDNGTS 211
           MAGRL+N ASRI GGNGVV RS+ +SLRLR+GMGLPVG+H VP KPLP+N+EL+WDNGT+
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 212 TPEPCIDRIAETVGKYEALAWLCGGLSFFASLGALAVLNDKASKIPFTPKVYPYDNLRVE 391
            PEPCIDRIA+TVGKYEALAWLCGGLSFFASLG LAV NDKASK PF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKTPFAPKVYPYDNLRVE 120

Query: 392 LGGEP 406
           LGGEP
Sbjct: 121 LGGEP 125


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