BLASTX nr result
ID: Cimicifuga21_contig00005724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005724
(503 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEO32977.1| hypothetical protein [Amblyomma maculatum] 96 1e-20
ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana] ... 94 1e-20
ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 96 1e-20
ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518... 96 1e-20
ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group] g... 94 3e-20
>gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 95.5 bits (236), Expect(2) = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 366
EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG
Sbjct: 109 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 154
Score = 28.9 bits (63), Expect(2) = 1e-20
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 292 GSVLHLVLALRGG 254
GSVLHLVLALRGG
Sbjct: 155 GSVLHLVLALRGG 167
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 369
E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 33 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 77
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 289 SVLHLVLALRGG 254
S LHLVL LRGG
Sbjct: 80 STLHLVLRLRGG 91
>ref|NP_564379.2| NEDD8-like protein RUB1 [Arabidopsis thaliana]
gi|302393813|sp|Q9SHE7.3|RUB1_ARATH RecName:
Full=Ubiquitin-NEDD8-like protein RUB1; Contains:
RecName: Full=Ubiquitin; Contains: RecName:
Full=NEDD8-like protein RUB1; AltName:
Full=Ubiquitin-related protein 1; Short=AtRUB1; Flags:
Precursor gi|6692129|gb|AAF24594.1|AC007654_10 T19E23.13
[Arabidopsis thaliana] gi|28973676|gb|AAO64156.1|
putative ubiquitin (AtRUB1) [Arabidopsis thaliana]
gi|29824269|gb|AAP04095.1| putative ubiquitin (AtRUB1)
[Arabidopsis thaliana] gi|110737109|dbj|BAF00506.1|
putative ubiquitin [Arabidopsis thaliana]
gi|312283039|dbj|BAJ34385.1| unnamed protein product
[Thellungiella halophila] gi|332193223|gb|AEE31344.1|
NEDD8-like protein RUB1 [Arabidopsis thaliana]
Length = 156
Score = 94.4 bits (233), Expect(2) = 1e-20
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 366
EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAK+YNIEG
Sbjct: 94 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 139
Score = 30.0 bits (66), Expect(2) = 1e-20
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 292 GSVLHLVLALRGGGG 248
GSVLHLVLALRGG G
Sbjct: 140 GSVLHLVLALRGGFG 154
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 369
E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 18 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 289 SVLHLVLALRGG 254
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|356556999|ref|XP_003546806.1| PREDICTED:
ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
gi|255627501|gb|ACU14095.1| unknown [Glycine max]
Length = 154
Score = 95.5 bits (236), Expect(2) = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 366
EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG
Sbjct: 94 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 139
Score = 28.9 bits (63), Expect(2) = 1e-20
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 292 GSVLHLVLALRGG 254
GSVLHLVLALRGG
Sbjct: 140 GSVLHLVLALRGG 152
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 369
E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 18 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 289 SVLHLVLALRGG 254
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518872|gb|AET00496.1|
Bi-ubiquitin [Medicago truncatula]
gi|388497058|gb|AFK36595.1| unknown [Medicago
truncatula]
Length = 153
Score = 95.5 bits (236), Expect(2) = 1e-20
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 366
EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG
Sbjct: 94 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 139
Score = 28.9 bits (63), Expect(2) = 1e-20
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 292 GSVLHLVLALRGG 254
GSVLHLVLALRGG
Sbjct: 140 GSVLHLVLALRGG 152
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 369
E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 18 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 289 SVLHLVLALRGG 254
S LHLVL LRGG
Sbjct: 65 STLHLVLRLRGG 76
>ref|NP_001058221.2| Os06g0650100 [Oryza sativa Japonica Group]
gi|255677281|dbj|BAF20135.2| Os06g0650100, partial
[Oryza sativa Japonica Group]
Length = 177
Score = 94.4 bits (233), Expect(2) = 3e-20
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEG 366
EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAK+YNIEG
Sbjct: 118 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEG 163
Score = 28.9 bits (63), Expect(2) = 3e-20
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 292 GSVLHLVLALRGG 254
GSVLHLVLALRGG
Sbjct: 164 GSVLHLVLALRGG 176
Score = 63.5 bits (153), Expect(2) = 2e-09
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -1
Query: 503 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIE 369
E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T +YNI+
Sbjct: 42 ESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 86
Score = 23.1 bits (48), Expect(2) = 2e-09
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 289 SVLHLVLALRGG 254
S LHLVL LRGG
Sbjct: 89 STLHLVLRLRGG 100