BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005723
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   635   e-179
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   635   e-179
ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|2...   609   e-172
ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   608   e-172
ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   608   e-172

>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Vitis vinifera]
          Length = 577

 Score =  635 bits (1637), Expect = e-179
 Identities = 310/413 (75%), Positives = 344/413 (83%)
 Frame = -3

Query: 1468 GEKEMERRDRLRMIMVKLDTEGQLERLLKAHXXXXXXXXXXXXXXXXXGPQTYPFYTEGS 1289
            GE+EMERRDRLRMIM KLD EGQLE+L+KAH                   Q YPFYTEGS
Sbjct: 166  GEREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQ-YPFYTEGS 224

Query: 1288 KALLDARIYITKYSTGXXXXXXXXXXXRKDDPDEDLDAEMNWALSQAGELALDCSEIGDD 1109
            K+LL+AR+ I KYS             ++DDPDEDLDAEM+W L +AG L LDCSEIGDD
Sbjct: 225  KSLLEARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDD 284

Query: 1108 RPLTGCSFSHDAKLLATCAMSGVTKLWSMPRVSKLGPLKGHTERATDVAFSPVDNVIATA 929
            RPL+GCSFSHD KLLA CA+SGV K+WSMP+V+K+  LKGHTERATDVAFSP  N +ATA
Sbjct: 285  RPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATA 344

Query: 928  SADCTAILWNTQGSILRKFEGHLARLARVAFHPSGKYLGTTSFDKTWRLWDIDTGVELLL 749
            SAD TA LWN++GS+L+ FEGHL RLAR+AFHPSGKYLGT SFDKTWRLWD++TG ELLL
Sbjct: 345  SADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLL 404

Query: 748  QEGHSRSVYGISFSRDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGY 569
            QEGHSRSVYGISF RDGSLAASCGLDAL RVWDLR+GRSILALEGHVKPVLG+ FSPNGY
Sbjct: 405  QEGHSRSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGY 464

Query: 568  HLATGGEDNTCRIWDLRKKKCMYIIPAHSNLISEVKFEPQEGYFLATASYDTTAKVWSAR 389
            HLATG EDNTCRIWDLRKKK +Y+IPAHSNL+S+VKFEPQEGYFL TASYD TAKVWSAR
Sbjct: 465  HLATGAEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSAR 524

Query: 388  DFKPIKTLSGHEAKVTALDITGDGQCIATVAYDRTIKLWSCRSNGKEKAMDID 230
            DFKP+KTLSGHEAKVT+LDIT DG CIATV++DRTIKLWS     KEKAMDID
Sbjct: 525  DFKPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 577


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  635 bits (1637), Expect = e-179
 Identities = 310/413 (75%), Positives = 344/413 (83%)
 Frame = -3

Query: 1468 GEKEMERRDRLRMIMVKLDTEGQLERLLKAHXXXXXXXXXXXXXXXXXGPQTYPFYTEGS 1289
            GE+EMERRDRLRMIM KLD EGQLE+L+KAH                   Q YPFYTEGS
Sbjct: 677  GEREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQ-YPFYTEGS 735

Query: 1288 KALLDARIYITKYSTGXXXXXXXXXXXRKDDPDEDLDAEMNWALSQAGELALDCSEIGDD 1109
            K+LL+AR+ I KYS             ++DDPDEDLDAEM+W L +AG L LDCSEIGDD
Sbjct: 736  KSLLEARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDD 795

Query: 1108 RPLTGCSFSHDAKLLATCAMSGVTKLWSMPRVSKLGPLKGHTERATDVAFSPVDNVIATA 929
            RPL+GCSFSHD KLLA CA+SGV K+WSMP+V+K+  LKGHTERATDVAFSP  N +ATA
Sbjct: 796  RPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATA 855

Query: 928  SADCTAILWNTQGSILRKFEGHLARLARVAFHPSGKYLGTTSFDKTWRLWDIDTGVELLL 749
            SAD TA LWN++GS+L+ FEGHL RLAR+AFHPSGKYLGT SFDKTWRLWD++TG ELLL
Sbjct: 856  SADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLL 915

Query: 748  QEGHSRSVYGISFSRDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGY 569
            QEGHSRSVYGISF RDGSLAASCGLDAL RVWDLR+GRSILALEGHVKPVLG+ FSPNGY
Sbjct: 916  QEGHSRSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGY 975

Query: 568  HLATGGEDNTCRIWDLRKKKCMYIIPAHSNLISEVKFEPQEGYFLATASYDTTAKVWSAR 389
            HLATG EDNTCRIWDLRKKK +Y+IPAHSNL+S+VKFEPQEGYFL TASYD TAKVWSAR
Sbjct: 976  HLATGAEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSAR 1035

Query: 388  DFKPIKTLSGHEAKVTALDITGDGQCIATVAYDRTIKLWSCRSNGKEKAMDID 230
            DFKP+KTLSGHEAKVT+LDIT DG CIATV++DRTIKLWS     KEKAMDID
Sbjct: 1036 DFKPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088


>ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|222854895|gb|EEE92442.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  609 bits (1571), Expect = e-172
 Identities = 297/413 (71%), Positives = 345/413 (83%)
 Frame = -3

Query: 1468 GEKEMERRDRLRMIMVKLDTEGQLERLLKAHXXXXXXXXXXXXXXXXXGPQTYPFYTEGS 1289
            GE+EMERRDRLRM+M KLD+EGQLE+L+K H                   Q YPFYTEGS
Sbjct: 138  GEREMERRDRLRMLMAKLDSEGQLEKLMKVHEEEEAASTAAAEDAEEEFVQ-YPFYTEGS 196

Query: 1288 KALLDARIYITKYSTGXXXXXXXXXXXRKDDPDEDLDAEMNWALSQAGELALDCSEIGDD 1109
            K LLDARI I KYS             ++DDPDED DAE++W+L+QA  L+L+CSE+GDD
Sbjct: 197  KELLDARIDIAKYSISKAALRLQRARRKRDDPDEDEDAEIDWSLNQAESLSLNCSELGDD 256

Query: 1108 RPLTGCSFSHDAKLLATCAMSGVTKLWSMPRVSKLGPLKGHTERATDVAFSPVDNVIATA 929
            RPL+GCSFS D ++LATC++SGV K+WS+P+V+K+  LKGH ERATDVAFSPV N +ATA
Sbjct: 257  RPLSGCSFSCDGEMLATCSLSGVAKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATA 316

Query: 928  SADCTAILWNTQGSILRKFEGHLARLARVAFHPSGKYLGTTSFDKTWRLWDIDTGVELLL 749
            SAD TA LWNT GS+L KFEGHL RLARVAFHPSGKYLGTTSFDKTWRLWDID+GVELLL
Sbjct: 317  SADRTARLWNTDGSLLMKFEGHLDRLARVAFHPSGKYLGTTSFDKTWRLWDIDSGVELLL 376

Query: 748  QEGHSRSVYGISFSRDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGY 569
            QEGHSRS+YGI+F  DGSLAASCGLDALARVWDLRTGRSI+A EGHVKP+LG+SFSPNGY
Sbjct: 377  QEGHSRSIYGIAFHHDGSLAASCGLDALARVWDLRTGRSIMAFEGHVKPLLGISFSPNGY 436

Query: 568  HLATGGEDNTCRIWDLRKKKCMYIIPAHSNLISEVKFEPQEGYFLATASYDTTAKVWSAR 389
            HLATGGEDNTCRIWDLRKKK +Y+IPAHSNL+S+VKFEPQEGY+L T+SYD TAKVWS R
Sbjct: 437  HLATGGEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYYLVTSSYDMTAKVWSGR 496

Query: 388  DFKPIKTLSGHEAKVTALDITGDGQCIATVAYDRTIKLWSCRSNGKEKAMDID 230
            DFK +KTLS HEAKVT+LDI+ DG+ IATV++DRTIKLWS RSN K+ AM+++
Sbjct: 497  DFKHVKTLSAHEAKVTSLDISADGRLIATVSHDRTIKLWSSRSNEKD-AMEVE 548


>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Cucumis sativus]
          Length = 568

 Score =  608 bits (1569), Expect = e-172
 Identities = 299/413 (72%), Positives = 337/413 (81%)
 Frame = -3

Query: 1468 GEKEMERRDRLRMIMVKLDTEGQLERLLKAHXXXXXXXXXXXXXXXXXGPQTYPFYTEGS 1289
            GE+EMERRDRLR IM +LD EGQLE+L+K H                   Q YPFYTEGS
Sbjct: 158  GEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQ-YPFYTEGS 216

Query: 1288 KALLDARIYITKYSTGXXXXXXXXXXXRKDDPDEDLDAEMNWALSQAGELALDCSEIGDD 1109
            KALLDARI I KYS             ++DDPDED++AEM+WAL QA  L LDCSEIGDD
Sbjct: 217  KALLDARIDIAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDD 276

Query: 1108 RPLTGCSFSHDAKLLATCAMSGVTKLWSMPRVSKLGPLKGHTERATDVAFSPVDNVIATA 929
            RPL+GCSFS D K LAT ++SGV KLWSMP+V K+   KGHTER TDV FSPV+  +ATA
Sbjct: 277  RPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATA 336

Query: 928  SADCTAILWNTQGSILRKFEGHLARLARVAFHPSGKYLGTTSFDKTWRLWDIDTGVELLL 749
            SAD TA LW+ +GS+L+ FEGHL RLAR+AFHPSGKYLGTTSFDKTWRLWD++TGVELLL
Sbjct: 337  SADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 396

Query: 748  QEGHSRSVYGISFSRDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGY 569
            QEGHSRSVYGI+F  DGSL +SCGLDALARVWDLRTGRS+LALEGHVKPVLGVSFSPNGY
Sbjct: 397  QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 456

Query: 568  HLATGGEDNTCRIWDLRKKKCMYIIPAHSNLISEVKFEPQEGYFLATASYDTTAKVWSAR 389
            HLATGGEDNTCRIWDLRKKK +YIIPAHSNL+S+VK+EPQEGYFL TAS+D TAK+WSAR
Sbjct: 457  HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 516

Query: 388  DFKPIKTLSGHEAKVTALDITGDGQCIATVAYDRTIKLWSCRSNGKEKAMDID 230
            DFKP+KTLSGHEAKVT+LDI  DGQCIATV++DRTIKLWS  S   +  MD+D
Sbjct: 517  DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDIQ-TMDVD 568


>ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Cucumis sativus]
          Length = 569

 Score =  608 bits (1569), Expect = e-172
 Identities = 299/413 (72%), Positives = 337/413 (81%)
 Frame = -3

Query: 1468 GEKEMERRDRLRMIMVKLDTEGQLERLLKAHXXXXXXXXXXXXXXXXXGPQTYPFYTEGS 1289
            GE+EMERRDRLR IM +LD EGQLE+L+K H                   Q YPFYTEGS
Sbjct: 159  GEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQ-YPFYTEGS 217

Query: 1288 KALLDARIYITKYSTGXXXXXXXXXXXRKDDPDEDLDAEMNWALSQAGELALDCSEIGDD 1109
            KALLDARI I KYS             ++DDPDED++AEM+WAL QA  L LDCSEIGDD
Sbjct: 218  KALLDARIDIAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDD 277

Query: 1108 RPLTGCSFSHDAKLLATCAMSGVTKLWSMPRVSKLGPLKGHTERATDVAFSPVDNVIATA 929
            RPL+GCSFS D K LAT ++SGV KLWSMP+V K+   KGHTER TDV FSPV+  +ATA
Sbjct: 278  RPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATA 337

Query: 928  SADCTAILWNTQGSILRKFEGHLARLARVAFHPSGKYLGTTSFDKTWRLWDIDTGVELLL 749
            SAD TA LW+ +GS+L+ FEGHL RLAR+AFHPSGKYLGTTSFDKTWRLWD++TGVELLL
Sbjct: 338  SADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 397

Query: 748  QEGHSRSVYGISFSRDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGVSFSPNGY 569
            QEGHSRSVYGI+F  DGSL +SCGLDALARVWDLRTGRS+LALEGHVKPVLGVSFSPNGY
Sbjct: 398  QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 457

Query: 568  HLATGGEDNTCRIWDLRKKKCMYIIPAHSNLISEVKFEPQEGYFLATASYDTTAKVWSAR 389
            HLATGGEDNTCRIWDLRKKK +YIIPAHSNL+S+VK+EPQEGYFL TAS+D TAK+WSAR
Sbjct: 458  HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 517

Query: 388  DFKPIKTLSGHEAKVTALDITGDGQCIATVAYDRTIKLWSCRSNGKEKAMDID 230
            DFKP+KTLSGHEAKVT+LDI  DGQCIATV++DRTIKLWS  S   +  MD+D
Sbjct: 518  DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDIQ-TMDVD 569