BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005628
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   220   3e-55
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              213   4e-53
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   213   4e-53
ref|XP_002310107.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-51
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab...   197   3e-48

>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
           gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
           protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/192 (58%), Positives = 129/192 (67%)
 Frame = +1

Query: 1   VSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIKVLMMKRELEKIPDLQHENWDRFLPXXXX 180
           V+AMGSFKGLKQVR+IVEDCIQNKLHP++HIK+LMMK+ELEK P LQ+ENWDRFLP    
Sbjct: 180 VAAMGSFKGLKQVRKIVEDCIQNKLHPVYHIKILMMKKELEKDPALQNENWDRFLPKFKK 239

Query: 181 XXXXXXXXXXXXXXQYTPFPPPQQPSKVDLELESGEYFLSDXXXXXXXXXXXXXXXXXXX 360
                          YTPFPP QQPSKVD ELESGEYFL++                   
Sbjct: 240 KNVKHNKVKRKEKKPYTPFPPEQQPSKVDRELESGEYFLNNQKKQAKKWQEKQERQAEKT 299

Query: 361 XXNKRKREAAFLPPEESTKHDSKKSEDGNNDMADVVKSLKKKAKDLGTQKAADNIRAENY 540
             NKRKR+ AF+PPEE    D+ KSED NND+A +  S+KKKAKD G + A +NI AE Y
Sbjct: 300 AENKRKRDTAFVPPEEHRDQDAGKSEDKNNDVAAIALSIKKKAKDFGKKNAVENINAEEY 359

Query: 541 IAAPGEPPKNKK 576
           IAA GE PK KK
Sbjct: 360 IAASGELPKKKK 371


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  213 bits (543), Expect = 4e-53
 Identities = 108/196 (55%), Positives = 125/196 (63%)
 Frame = +1

Query: 1   VSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIKVLMMKRELEKIPDLQHENWDRFLPXXXX 180
           V+AMGSFKGLKQVRR+VEDCIQNK+HP++HIK LMMKREL   P L++ENWDRFLP    
Sbjct: 224 VAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENWDRFLPKFKK 283

Query: 181 XXXXXXXXXXXXXXQYTPFPPPQQPSKVDLELESGEYFLSDXXXXXXXXXXXXXXXXXXX 360
                          YTPFPPPQ PSKVDL+LESGEYFLSD                   
Sbjct: 284 KNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQKLEKQAEKT 343

Query: 361 XXNKRKREAAFLPPEESTKHDSKKSEDGNNDMADVVKSLKKKAKDLGTQKAADNIRAENY 540
             NKRKREAAF+PP E    D  KS D  ND+A +  SLKKKAK+ G QK+ +N+  E Y
Sbjct: 344 AENKRKREAAFVPPMEPMVQDPSKSADDKNDVAAMAMSLKKKAKEFGKQKSLENVNPETY 403

Query: 541 IAAPGEPPKNKKSRRN 588
           IAA GE P  KK + +
Sbjct: 404 IAASGEAPSKKKRKHS 419


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis
           vinifera]
          Length = 386

 Score =  213 bits (543), Expect = 4e-53
 Identities = 108/196 (55%), Positives = 125/196 (63%)
 Frame = +1

Query: 1   VSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIKVLMMKRELEKIPDLQHENWDRFLPXXXX 180
           V+AMGSFKGLKQVRR+VEDCIQNK+HP++HIK LMMKREL   P L++ENWDRFLP    
Sbjct: 186 VAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLMMKRELASDPALENENWDRFLPKFKK 245

Query: 181 XXXXXXXXXXXXXXQYTPFPPPQQPSKVDLELESGEYFLSDXXXXXXXXXXXXXXXXXXX 360
                          YTPFPPPQ PSKVDL+LESGEYFLSD                   
Sbjct: 246 KNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESGEYFLSDQKKFAKKWQQKLEKQAEKT 305

Query: 361 XXNKRKREAAFLPPEESTKHDSKKSEDGNNDMADVVKSLKKKAKDLGTQKAADNIRAENY 540
             NKRKREAAF+PP E    D  KS D  ND+A +  SLKKKAK+ G QK+ +N+  E Y
Sbjct: 306 AENKRKREAAFVPPMEPMVQDPSKSADDKNDVAAMAMSLKKKAKEFGKQKSLENVNPETY 365

Query: 541 IAAPGEPPKNKKSRRN 588
           IAA GE P  KK + +
Sbjct: 366 IAASGEAPSKKKRKHS 381


>ref|XP_002310107.1| predicted protein [Populus trichocarpa] gi|222853010|gb|EEE90557.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  206 bits (525), Expect = 4e-51
 Identities = 105/196 (53%), Positives = 129/196 (65%)
 Frame = +1

Query: 1   VSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIKVLMMKRELEKIPDLQHENWDRFLPXXXX 180
           V+AMGSFKGLKQVRRIVEDCIQNK+HP++HIK+LMMK+ELEK P L++ENWDRFLP    
Sbjct: 188 VAAMGSFKGLKQVRRIVEDCIQNKMHPVYHIKILMMKKELEKDPALKNENWDRFLPKYKK 247

Query: 181 XXXXXXXXXXXXXXQYTPFPPPQQPSKVDLELESGEYFLSDXXXXXXXXXXXXXXXXXXX 360
                         Q TPFPPPQQPS  D++LE+GEYFLSD                   
Sbjct: 248 KTVKQKKVKSKKKKQDTPFPPPQQPSMEDIQLETGEYFLSDKKKQAKKWHEKQEKQLEKT 307

Query: 361 XXNKRKREAAFLPPEESTKHDSKKSEDGNNDMADVVKSLKKKAKDLGTQKAADNIRAENY 540
             NKRKR+AAF+PP+E    D     D N D+A +  SLKKKAK+ G QK+ +N+  E+Y
Sbjct: 308 AENKRKRDAAFVPPKE----DPSTYADNNKDVAAMAMSLKKKAKEFGKQKSFENVNPEDY 363

Query: 541 IAAPGEPPKNKKSRRN 588
           IA  GE P+ KKS+R+
Sbjct: 364 IATSGEQPRKKKSKRD 379


>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
           lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
           ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score =  197 bits (501), Expect = 3e-48
 Identities = 101/201 (50%), Positives = 129/201 (64%), Gaps = 5/201 (2%)
 Frame = +1

Query: 1   VSAMGSFKGLKQVRRIVEDCIQNKLHPIFHIKVLMMKRELEKIPDLQHENWDRFLPXXXX 180
           V+AMG FKGLKQ+RRIVEDC+QNK+HP++HIK LMMK+ELEK P L +E+WDRFLP    
Sbjct: 189 VAAMGPFKGLKQLRRIVEDCVQNKMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRK 248

Query: 181 XXXXXXXXXXXXXXQYTPFPPPQQPSKVDLELESGEYFLSDXXXXXXXXXXXXXXXXXXX 360
                          YTPFPPPQ PSK+D++LESGEYF+SD                   
Sbjct: 249 KNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWLEKQEKQTEKS 308

Query: 361 XXNKRKREAAFLPPEESTKHDSK--KSEDGNNDMADVVKSLKKKAKDLGTQKAA-DNIRA 531
             NKRKR+A+FLPPEE   ++SK   SEDG ND+ ++ +SLK K K+L  QK   + + A
Sbjct: 309 TENKRKRDASFLPPEEPMNNNSKANNSEDGKNDITELTQSLKSKTKELKKQKKTHERVNA 368

Query: 532 ENYIAAPG--EPPKNKKSRRN 588
           E YIA P   + P  +KS++N
Sbjct: 369 EEYIAGPSSIDKPAKEKSKKN 389