BLASTX nr result
ID: Cimicifuga21_contig00005624
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00005624 (825 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513029.1| protein with unknown function [Ricinus commu... 65 2e-08 ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-08 ref|XP_002456507.1| hypothetical protein SORBIDRAFT_03g037575 [S... 62 1e-07 ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2... 62 1e-07 gb|AFK35294.1| unknown [Medicago truncatula] 61 3e-07 >ref|XP_002513029.1| protein with unknown function [Ricinus communis] gi|223548040|gb|EEF49532.1| protein with unknown function [Ricinus communis] Length = 143 Score = 64.7 bits (156), Expect = 2e-08 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 6/77 (7%) Frame = -2 Query: 626 QSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLAR----DGFPEN--ME 465 Q+ KR +KK IKVVYIS+PMKV+TSAS+FRALVQ+LTG DSD AR + EN E Sbjct: 13 QASKR--SKKGIKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTE 70 Query: 464 GVPQQAINVTNDYGSQL 414 P ++ ++++GS L Sbjct: 71 TTPDRSRAASDEHGSVL 87 >ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|222854862|gb|EEE92409.1| predicted protein [Populus trichocarpa] Length = 154 Score = 64.3 bits (155), Expect = 3e-08 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 11/86 (12%) Frame = -2 Query: 632 AHQSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLA-------RDGFPE 474 AH+ T KKP+KVVYIS PMK K SASEFRALVQ+LTG DS+L DG Sbjct: 18 AHRIAGTGTKKKPMKVVYISNPMKFKASASEFRALVQELTGQDSELPDPSKFVDSDGHDR 77 Query: 473 NMEG----VPQQAINVTNDYGSQLEI 408 ++ G VP + +V D G E+ Sbjct: 78 DVGGNYQTVPNASKSVVVDGGHAQEV 103 >ref|XP_002456507.1| hypothetical protein SORBIDRAFT_03g037575 [Sorghum bicolor] gi|241928482|gb|EES01627.1| hypothetical protein SORBIDRAFT_03g037575 [Sorghum bicolor] Length = 181 Score = 62.4 bits (150), Expect = 1e-07 Identities = 32/53 (60%), Positives = 41/53 (77%) Frame = -2 Query: 602 KKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLARDGFPENMEGVPQQAI 444 KKPIKVVYIS PM+VKTSA+ FRALVQ+LTG D+D ++ PE++ G A+ Sbjct: 39 KKPIKVVYISNPMRVKTSAAGFRALVQELTGRDADPSKYS-PEDLAGAADAAV 90 >ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1| predicted protein [Populus trichocarpa] Length = 138 Score = 62.4 bits (150), Expect = 1e-07 Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 7/66 (10%) Frame = -2 Query: 626 QSKKRCTTK---KPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLAR----DGFPENM 468 +S KR TK K IKVVYIS+PMKVKTSAS+FRALVQ+LTG DSD R +G +++ Sbjct: 9 KSGKRSHTKRGKKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARDSL 68 Query: 467 EGVPQQ 450 E +P Q Sbjct: 69 E-IPHQ 73 >gb|AFK35294.1| unknown [Medicago truncatula] Length = 135 Score = 61.2 bits (147), Expect = 3e-07 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 5/88 (5%) Frame = -2 Query: 626 QSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLARDGFPE-----NMEG 462 QSKK KK +KV YIS+PMKVKTSAS FRALVQ+LTG DS++A D F E +++ Sbjct: 21 QSKKN---KKEVKVTYISSPMKVKTSASNFRALVQELTGQDSNVA-DMFVEVNDFVHVDD 76 Query: 461 VPQQAINVTNDYGSQLEIVDDGLESFFP 378 V Q N + S ++ E F P Sbjct: 77 VQNQQKNSIEQWSSD----NNSSEGFMP 100