BLASTX nr result

ID: Cimicifuga21_contig00005624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005624
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513029.1| protein with unknown function [Ricinus commu...    65   2e-08
ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08
ref|XP_002456507.1| hypothetical protein SORBIDRAFT_03g037575 [S...    62   1e-07
ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
gb|AFK35294.1| unknown [Medicago truncatula]                           61   3e-07

>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
 Frame = -2

Query: 626 QSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLAR----DGFPEN--ME 465
           Q+ KR  +KK IKVVYIS+PMKV+TSAS+FRALVQ+LTG DSD AR    +   EN   E
Sbjct: 13  QASKR--SKKGIKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTE 70

Query: 464 GVPQQAINVTNDYGSQL 414
             P ++   ++++GS L
Sbjct: 71  TTPDRSRAASDEHGSVL 87


>ref|XP_002308886.1| predicted protein [Populus trichocarpa] gi|222854862|gb|EEE92409.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
 Frame = -2

Query: 632 AHQSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLA-------RDGFPE 474
           AH+     T KKP+KVVYIS PMK K SASEFRALVQ+LTG DS+L         DG   
Sbjct: 18  AHRIAGTGTKKKPMKVVYISNPMKFKASASEFRALVQELTGQDSELPDPSKFVDSDGHDR 77

Query: 473 NMEG----VPQQAINVTNDYGSQLEI 408
           ++ G    VP  + +V  D G   E+
Sbjct: 78  DVGGNYQTVPNASKSVVVDGGHAQEV 103


>ref|XP_002456507.1| hypothetical protein SORBIDRAFT_03g037575 [Sorghum bicolor]
           gi|241928482|gb|EES01627.1| hypothetical protein
           SORBIDRAFT_03g037575 [Sorghum bicolor]
          Length = 181

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = -2

Query: 602 KKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLARDGFPENMEGVPQQAI 444
           KKPIKVVYIS PM+VKTSA+ FRALVQ+LTG D+D ++   PE++ G    A+
Sbjct: 39  KKPIKVVYISNPMRVKTSAAGFRALVQELTGRDADPSKYS-PEDLAGAADAAV 90


>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
 Frame = -2

Query: 626 QSKKRCTTK---KPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLAR----DGFPENM 468
           +S KR  TK   K IKVVYIS+PMKVKTSAS+FRALVQ+LTG DSD  R    +G  +++
Sbjct: 9   KSGKRSHTKRGKKAIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARDSL 68

Query: 467 EGVPQQ 450
           E +P Q
Sbjct: 69  E-IPHQ 73


>gb|AFK35294.1| unknown [Medicago truncatula]
          Length = 135

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
 Frame = -2

Query: 626 QSKKRCTTKKPIKVVYISTPMKVKTSASEFRALVQQLTGLDSDLARDGFPE-----NMEG 462
           QSKK    KK +KV YIS+PMKVKTSAS FRALVQ+LTG DS++A D F E     +++ 
Sbjct: 21  QSKKN---KKEVKVTYISSPMKVKTSASNFRALVQELTGQDSNVA-DMFVEVNDFVHVDD 76

Query: 461 VPQQAINVTNDYGSQLEIVDDGLESFFP 378
           V  Q  N    + S     ++  E F P
Sbjct: 77  VQNQQKNSIEQWSSD----NNSSEGFMP 100


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