BLASTX nr result
ID: Cimicifuga21_contig00005619
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005619
(2153 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279515.2| PREDICTED: flowering time control protein FC... 399 e-108
emb|CBI22860.3| unnamed protein product [Vitis vinifera] 399 e-108
ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|2... 385 e-104
ref|XP_002519252.1| Flowering time control protein FCA, putative... 379 e-102
ref|XP_003529516.1| PREDICTED: flowering time control protein FC... 360 8e-97
>ref|XP_002279515.2| PREDICTED: flowering time control protein FCA [Vitis vinifera]
Length = 785
Score = 399 bits (1024), Expect = e-108
Identities = 216/352 (61%), Positives = 240/352 (68%), Gaps = 7/352 (1%)
Frame = +3
Query: 3 DGADGGSFAKLFVGSVPRTATEEEIRPLFEEHGEVIEVALLKDKRTGQQQGCCFIKYATS 182
D DGG FAKLFVGSVPRTATEE+IRPLFEEHG V+EVAL+KDKRTGQQQGCCFIKYATS
Sbjct: 110 DRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATS 169
Query: 183 EEADRAIGGLHNKYTLPGGVGPIQVRYADGERERLGAVEHKLFVGSLNRQATEKEIEEIF 362
EEA+RAI LHN+YTLPGGVGPIQVRYADGERERLGAVE+KLFVGSLN+QATEKE++EIF
Sbjct: 170 EEAERAIRALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIF 229
Query: 363 SPYGRVEDVYIMRDEVKQSRGCGFVKFSHRDMAAEAIARLNGIYVMRGCDQPLTVRFADP 542
SPYG+VEDVY+MRDE+KQSRGCGFVKFSHRDMA AI LNGIY MRGCDQPLTVRFADP
Sbjct: 230 SPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADP 289
Query: 543 KRPXXXXXXXXXXXXXXXXXXXXXQAFSGVRPPPYLGESMG-GHAPPNAWNPMSPQNVGP 719
KRP GVRP G+ +G G PPNAW PMSPQN+GP
Sbjct: 290 KRPRPGESRGAPAFGGPGFGPRFQA--PGVRPTMNQGDPIGSGRIPPNAWRPMSPQNLGP 347
Query: 720 SSEANAHGFGS-----XXXXXXXXXXXXXXXXXXXXMNGSLAG-NXXXXXXXXXXXXXXX 881
SS A HGFG+ +GSL+G
Sbjct: 348 SSNAGIHGFGNQSLPRSGDGSISSTPGVPLGGLGGSADGSLSGIAVSSSATSQQSFNQPM 407
Query: 882 XXXXXIGQHVSPMQKPLQSPQRLLPPFQPHSQQMPLSYSQKETPPVSIPQTG 1037
IG+ +SP+QK LQSPQ L P Q S Q P SY+Q +TP S+ Q G
Sbjct: 408 LQVPSIGEQISPLQKSLQSPQHLPPSLQLQS-QTPASYTQPQTPHSSLRQFG 458
Score = 111 bits (277), Expect = 9e-22
Identities = 78/218 (35%), Positives = 88/218 (40%), Gaps = 13/218 (5%)
Frame = +3
Query: 1383 TQHQASQVTKQQSPWPGTIPHAGVNXXXXXXXXXXXXXXXXXXXXXNMQTTAPLTCNWTE 1562
T Q SQ TKQQ WPGT+P + Q AP+ CNWTE
Sbjct: 585 TSQQGSQTTKQQ--WPGTVPQTVASTATITPATDVPSTTSAVPV--TTQAVAPVKCNWTE 640
Query: 1563 HTSPEGFKYYYNSATTESKWEKPGELVLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1742
HTSP+G+KYY+NS T ES+WEKP EL L E
Sbjct: 641 HTSPDGYKYYHNSVTGESRWEKPEELTLLE-------------QQQQQQKSSVQQSQAQS 687
Query: 1743 XXXXXXTHSHPQVGVLSSXXXXXXXXXXXXXXIYNPHQFQLQQASSSTDVGY-------- 1898
T PQ + HQ Q SS+ G
Sbjct: 688 HTQVLSTQQIPQAQQVQLQTQLQAHLQAQLQSQLRQHQQMQQPPVSSSASGVMGQQNVQE 747
Query: 1899 --YAQAQPVAS---DPARFQQGSQAGQEWMWKKKPAGA 1997
YAQAQ AS DPARFQQG QA QEWMWK KPAG+
Sbjct: 748 LGYAQAQVGASSVNDPARFQQGLQAAQEWMWKNKPAGS 785
>emb|CBI22860.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 399 bits (1024), Expect = e-108
Identities = 216/352 (61%), Positives = 240/352 (68%), Gaps = 7/352 (1%)
Frame = +3
Query: 3 DGADGGSFAKLFVGSVPRTATEEEIRPLFEEHGEVIEVALLKDKRTGQQQGCCFIKYATS 182
D DGG FAKLFVGSVPRTATEE+IRPLFEEHG V+EVAL+KDKRTGQQQGCCFIKYATS
Sbjct: 33 DRYDGGGFAKLFVGSVPRTATEEDIRPLFEEHGNVLEVALIKDKRTGQQQGCCFIKYATS 92
Query: 183 EEADRAIGGLHNKYTLPGGVGPIQVRYADGERERLGAVEHKLFVGSLNRQATEKEIEEIF 362
EEA+RAI LHN+YTLPGGVGPIQVRYADGERERLGAVE+KLFVGSLN+QATEKE++EIF
Sbjct: 93 EEAERAIRALHNQYTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVKEIF 152
Query: 363 SPYGRVEDVYIMRDEVKQSRGCGFVKFSHRDMAAEAIARLNGIYVMRGCDQPLTVRFADP 542
SPYG+VEDVY+MRDE+KQSRGCGFVKFSHRDMA AI LNGIY MRGCDQPLTVRFADP
Sbjct: 153 SPYGQVEDVYLMRDELKQSRGCGFVKFSHRDMAMAAINALNGIYTMRGCDQPLTVRFADP 212
Query: 543 KRPXXXXXXXXXXXXXXXXXXXXXQAFSGVRPPPYLGESMG-GHAPPNAWNPMSPQNVGP 719
KRP GVRP G+ +G G PPNAW PMSPQN+GP
Sbjct: 213 KRPRPGESRGAPAFGGPGFGPRFQA--PGVRPTMNQGDPIGSGRIPPNAWRPMSPQNLGP 270
Query: 720 SSEANAHGFGS-----XXXXXXXXXXXXXXXXXXXXMNGSLAG-NXXXXXXXXXXXXXXX 881
SS A HGFG+ +GSL+G
Sbjct: 271 SSNAGIHGFGNQSLPRSGDGSISSTPGVPLGGLGGSADGSLSGIAVSSSATSQQSFNQPM 330
Query: 882 XXXXXIGQHVSPMQKPLQSPQRLLPPFQPHSQQMPLSYSQKETPPVSIPQTG 1037
IG+ +SP+QK LQSPQ L P Q S Q P SY+Q +TP S+ Q G
Sbjct: 331 LQVPSIGEQISPLQKSLQSPQHLPPSLQLQS-QTPASYTQPQTPHSSLRQFG 381
Score = 111 bits (277), Expect = 9e-22
Identities = 78/218 (35%), Positives = 88/218 (40%), Gaps = 13/218 (5%)
Frame = +3
Query: 1383 TQHQASQVTKQQSPWPGTIPHAGVNXXXXXXXXXXXXXXXXXXXXXNMQTTAPLTCNWTE 1562
T Q SQ TKQQ WPGT+P + Q AP+ CNWTE
Sbjct: 508 TSQQGSQTTKQQ--WPGTVPQTVASTATITPATDVPSTTSAVPV--TTQAVAPVKCNWTE 563
Query: 1563 HTSPEGFKYYYNSATTESKWEKPGELVLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1742
HTSP+G+KYY+NS T ES+WEKP EL L E
Sbjct: 564 HTSPDGYKYYHNSVTGESRWEKPEELTLLE-------------QQQQQQKSSVQQSQAQS 610
Query: 1743 XXXXXXTHSHPQVGVLSSXXXXXXXXXXXXXXIYNPHQFQLQQASSSTDVGY-------- 1898
T PQ + HQ Q SS+ G
Sbjct: 611 HTQVLSTQQIPQAQQVQLQTQLQAHLQAQLQSQLRQHQQMQQPPVSSSASGVMGQQNVQE 670
Query: 1899 --YAQAQPVAS---DPARFQQGSQAGQEWMWKKKPAGA 1997
YAQAQ AS DPARFQQG QA QEWMWK KPAG+
Sbjct: 671 LGYAQAQVGASSVNDPARFQQGLQAAQEWMWKNKPAGS 708
>ref|XP_002316051.1| predicted protein [Populus trichocarpa] gi|222865091|gb|EEF02222.1|
predicted protein [Populus trichocarpa]
Length = 343
Score = 385 bits (988), Expect = e-104
Identities = 190/249 (76%), Positives = 206/249 (82%)
Frame = +3
Query: 6 GADGGSFAKLFVGSVPRTATEEEIRPLFEEHGEVIEVALLKDKRTGQQQGCCFIKYATSE 185
G G +FAKLFVGSVPRTATE +IRPLFEEHG VIEVAL+KDKRTGQQQGCCFIKYATSE
Sbjct: 81 GRSGFAFAKLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSE 140
Query: 186 EADRAIGGLHNKYTLPGGVGPIQVRYADGERERLGAVEHKLFVGSLNRQATEKEIEEIFS 365
EADRAI LHN+ TLPGGVGPIQVRYADGERERLGAVE+KLFVGSLN+QATEKE+EEIF+
Sbjct: 141 EADRAIRALHNQRTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFT 200
Query: 366 PYGRVEDVYIMRDEVKQSRGCGFVKFSHRDMAAEAIARLNGIYVMRGCDQPLTVRFADPK 545
PYGRVEDVY+MRDE+KQSRGCGFVK+SHRDMA AI LNGIY MRGC+QPLTVRFADPK
Sbjct: 201 PYGRVEDVYLMRDEMKQSRGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPK 260
Query: 546 RPXXXXXXXXXXXXXXXXXXXXXQAFSGVRPPPYLGESMGGHAPPNAWNPMSPQNVGPSS 725
RP QA SG+RPPP LG+ MG H PPNAW PMSPQN+GPSS
Sbjct: 261 RPRPGGDSRGGPAFGSPGAGPRFQA-SGLRPPPNLGDPMGDHIPPNAWLPMSPQNMGPSS 319
Query: 726 EANAHGFGS 752
A HGFG+
Sbjct: 320 NAGVHGFGN 328
Score = 62.0 bits (149), Expect = 6e-07
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 267 DGERERLGAVEHKLFVGSLNRQATEKEIEEIFSPYGRVEDVYIMRDE-VKQSRGCGFVKF 443
DG R G KLFVGS+ R ATE +I +F +G V +V +++D+ Q +GC F+K+
Sbjct: 77 DGGGGRSGFAFAKLFVGSVPRTATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKY 136
Query: 444 SHRDMAAEAIARLNGIYVMRGCDQPLTVRFADPKR 548
+ + A AI L+ + G P+ VR+AD +R
Sbjct: 137 ATSEEADRAIRALHNQRTLPGGVGPIQVRYADGER 171
>ref|XP_002519252.1| Flowering time control protein FCA, putative [Ricinus communis]
gi|223541567|gb|EEF43116.1| Flowering time control
protein FCA, putative [Ricinus communis]
Length = 811
Score = 379 bits (974), Expect = e-102
Identities = 201/338 (59%), Positives = 231/338 (68%), Gaps = 2/338 (0%)
Frame = +3
Query: 3 DGADGGSFAKLFVGSVPRTATEEEIRPLFEEHGEVIEVALLKDKRTGQQQGCCFIKYATS 182
D + GSFAKLFVGSVPRTA+EE+IRPLFE+HG VIEVAL+KDKRTGQQQGCCF+KYATS
Sbjct: 153 DHTECGSFAKLFVGSVPRTASEEDIRPLFEQHGNVIEVALIKDKRTGQQQGCCFVKYATS 212
Query: 183 EEADRAIGGLHNKYTLPGGVGPIQVRYADGERERLGAVEHKLFVGSLNRQATEKEIEEIF 362
EEADRAI LHN++TLPGG+GPIQVR+ADGERERLGAVE+KLFVGSLN+QATEKE+EEIF
Sbjct: 213 EEADRAIRALHNQHTLPGGIGPIQVRFADGERERLGAVEYKLFVGSLNKQATEKEVEEIF 272
Query: 363 SPYGRVEDVYIMRDEVKQSRGCGFVKFSHRDMAAEAIARLNGIYVMRGCDQPLTVRFADP 542
SPYG VEDVY+MRDE+KQSRGCGFVK+S R+MA AI LNGIY MRGCDQPLTVRFADP
Sbjct: 273 SPYGHVEDVYLMRDEMKQSRGCGFVKYSSREMALAAINALNGIYKMRGCDQPLTVRFADP 332
Query: 543 KRPXXXXXXXXXXXXXXXXXXXXXQAFSGVRPPPYLGESMGGHAPPNAWNPMSPQNVGPS 722
KRP G R PP G+++G PP+AW PMSPQ++GPS
Sbjct: 333 KRPRPGDSRGGPAFGGPGFGPRFQA--PGPRLPPNFGDAVGDRVPPSAWRPMSPQDMGPS 390
Query: 723 SEANAHGFGS--XXXXXXXXXXXXXXXXXXXXMNGSLAGNXXXXXXXXXXXXXXXXXXXX 896
A HGFGS +G+ G+
Sbjct: 391 PNAAIHGFGSQLIPRPGELAAPPNQGGPFGGPSDGARPGH-MISSTAQQSFNPSLQHAPP 449
Query: 897 IGQHVSPMQKPLQSPQRLLPPFQPHSQQMPLSYSQKET 1010
+GQ +SP+QKPLQSPQ L P Q H Q SYSQ +T
Sbjct: 450 VGQQISPLQKPLQSPQHLPPSLQLHPQ--VTSYSQTQT 485
Score = 77.0 bits (188), Expect = 2e-11
Identities = 44/94 (46%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +3
Query: 1377 NPTQHQASQVTKQQSPWPGTIPHAGVNXXXXXXXXXXXXXXXXXXXXXNMQTTAPLTCN- 1553
N HQ SQ TKQQ WPG P + +TAP+
Sbjct: 599 NQNLHQNSQPTKQQQ-WPGIAPQTVASTAPAALAADVPPST----------STAPVIAQP 647
Query: 1554 -WTEHTSPEGFKYYYNSATTESKWEKPGELVLFE 1652
WTEHTSPEGFKYYYNS T ES+WEKP EL LFE
Sbjct: 648 VWTEHTSPEGFKYYYNSVTRESRWEKPEELTLFE 681
>ref|XP_003529516.1| PREDICTED: flowering time control protein FCA-like [Glycine max]
Length = 737
Score = 360 bits (924), Expect = 8e-97
Identities = 197/347 (56%), Positives = 222/347 (63%), Gaps = 4/347 (1%)
Frame = +3
Query: 3 DGADGGSFAKLFVGSVPRTATEEEIRPLFEEHGEVIEVALLKDKRTGQQQGCCFIKYATS 182
D DGG+FAKLFVGSVPRTATEE+IRPLFEEHG VIEVAL+KDK+TGQ QGCCFIKYATS
Sbjct: 78 DHLDGGNFAKLFVGSVPRTATEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATS 137
Query: 183 EEADRAIGGLHNKYTLPGGVGPIQVRYADGERERLGAVEHKLFVGSLNRQATEKEIEEIF 362
EEAD+AI LHN++TLPGGVGPIQVRYADGERERLGAVE+KLFVGSLN+QAT KE+EEIF
Sbjct: 138 EEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKEVEEIF 197
Query: 363 SPYGRVEDVYIMRDEVKQSRGCGFVKFSHRDMAAEAIARLNGIYVMRGCDQPLTVRFADP 542
S YGRVEDVY+MRDE KQSRGCGFVK+SHRDMA AI LNGIY MRGC+QPL VRFADP
Sbjct: 198 SKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADP 257
Query: 543 KRPXXXXXXXXXXXXXXXXXXXXXQAFSGVRPPPYLGESMGGHAPP-NAWNPMSPQNVGP 719
KRP G R P + + MG PP NAW+P+ P N+GP
Sbjct: 258 KRPRQGDSRGLAFGGPGFGPRFDA---PGTRHPSNITDPMGDRMPPSNAWHPLHPPNMGP 314
Query: 720 SSEANAHGFGS-XXXXXXXXXXXXXXXXXXXXMNGSLAG--NXXXXXXXXXXXXXXXXXX 890
SS A HG GS + G + G
Sbjct: 315 SSNAGFHGMGSPLLPRSGDMALPTDAGGPMTSLGGPIDGRFQVQSIPMSQQNFNQPMPQI 374
Query: 891 XXIGQHVSPMQKPLQSPQRLLPPFQPHSQQMPLSYSQKETPPVSIPQ 1031
+ Q +SP+QKP+QS Q LPP Q P+ Y Q PQ
Sbjct: 375 PPVNQQISPLQKPVQSSQE-LPPSHQLYPQAPVPYPQTSLRQHGQPQ 420
Score = 84.0 bits (206), Expect = 2e-13
Identities = 60/172 (34%), Positives = 69/172 (40%), Gaps = 16/172 (9%)
Frame = +3
Query: 1527 QTTAPLTCNWTEHTSPEGFKYYYNSATTESKWEKPGELVLFEXXXXXXXXXXXXXXXXXX 1706
Q A + CNWTEH SPEGFKYYYNS T ES+WEKP EL L E
Sbjct: 587 QNMALVKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQRPSVQQSQTQSQ 646
Query: 1707 XXXXXXXXXXXXXXXXXXTHSHPQVGVLSSXXXXXXXXXXXXXXIYNPHQFQLQQASSST 1886
+H QV HQ Q+QQ S S+
Sbjct: 647 PSILPAQQVPQIQQVQPQSHLQGQV----------------------LHQQQIQQPSLSS 684
Query: 1887 --------------DVGY-YAQAQPV-ASDPARFQQGSQAGQEWMWKKKPAG 1994
+VGY QA + A DP R+ QG + QE MWK KPAG
Sbjct: 685 LFQAYGVTGPQNVQEVGYKQLQASVISAGDPGRYSQGIHSTQELMWKNKPAG 736