BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005616
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   403   e-110
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   399   e-108
ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycin...   382   e-103
ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH...   377   e-102
ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102

>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
            gi|302142996|emb|CBI20291.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  403 bits (1035), Expect = e-110
 Identities = 207/275 (75%), Positives = 234/275 (85%)
 Frame = -3

Query: 1178 SSVAGICHVVHAXXXXXXXXXXXXXXXKSSIDAVKNILEMXXXXXXXREAFHTDFLTPPI 999
            SS +G+CH+  A                S+I+AVK+ILEM       RE  HTDFLTPP+
Sbjct: 48   SSASGMCHLAQAMKGDANSLLKGVADR-STIEAVKHILEMAKRASARREVLHTDFLTPPV 106

Query: 998  LKESILVLEKLADVKAVSQGGYPQAERCRLSVGHSEAMPSIPDIVAALSIAGNFGFQPCS 819
            LKES++VLEKLAD+KAV+QGGYPQAERCRLSVGHSE + + PDIVAAL I GNFGFQ CS
Sbjct: 107  LKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCS 166

Query: 818  HGDFLGAILGTGIAREKLGDILLQGEKGAQILVVPELVDFLVSSLDKVGNVPVSCTKIPL 639
            HGDFLGAILGTGIAREKLGDI+LQGEKGAQ+L+VPELVDFLVSSL+KVGNV VSCTK+PL
Sbjct: 167  HGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPL 226

Query: 638  LALEYEPPRTKSFKTIEASLRVDALASAGFKVSRSKLVDLISNGDVRVNWTPVSKNGATL 459
            LALEYE PRT +FKTIE SLRVDALASAGFK+SRSKLVDLISNGDVRVNWT V+KNG TL
Sbjct: 227  LALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTL 286

Query: 458  KTGDMVSVSGKGRLQIGEIKTTKKGKFAVELIQYL 354
            KTGD+VSVSGKGRL+IGEI +TKKGK+AVELI++L
Sbjct: 287  KTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 321


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  399 bits (1024), Expect = e-108
 Identities = 201/247 (81%), Positives = 225/247 (91%)
 Frame = -3

Query: 1094 SSIDAVKNILEMXXXXXXXREAFHTDFLTPPILKESILVLEKLADVKAVSQGGYPQAERC 915
            S+I+AVK+ILEM       RE  HTDFLTPP+LKES++VLEKLAD+KAV+QGGYPQAERC
Sbjct: 23   STIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVLEKLADMKAVAQGGYPQAERC 82

Query: 914  RLSVGHSEAMPSIPDIVAALSIAGNFGFQPCSHGDFLGAILGTGIAREKLGDILLQGEKG 735
            RLSVGHSE + + PDIVAAL I GNFGFQ CSHGDFLGAILGTGIAREKLGDI+LQGEKG
Sbjct: 83   RLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGAILGTGIAREKLGDIILQGEKG 142

Query: 734  AQILVVPELVDFLVSSLDKVGNVPVSCTKIPLLALEYEPPRTKSFKTIEASLRVDALASA 555
            AQ+L+VPELVDFLVSSL+KVGNV VSCTK+PLLALEYE PRT +FKTIE SLRVDALASA
Sbjct: 143  AQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEEPRTTTFKTIELSLRVDALASA 202

Query: 554  GFKVSRSKLVDLISNGDVRVNWTPVSKNGATLKTGDMVSVSGKGRLQIGEIKTTKKGKFA 375
            GFK+SRSKLVDLISNGDVRVNWT V+KNG TLKTGD+VSVSGKGRL+IGEI +TKKGK+A
Sbjct: 203  GFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKYA 262

Query: 374  VELIQYL 354
            VELI++L
Sbjct: 263  VELIRFL 269


>ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycine max]
            gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score =  382 bits (980), Expect = e-103
 Identities = 189/242 (78%), Positives = 218/242 (90%)
 Frame = -3

Query: 1079 VKNILEMXXXXXXXREAFHTDFLTPPILKESILVLEKLADVKAVSQGGYPQAERCRLSVG 900
            VK+ILEM       RE  HTDFLTPP+LKES+ VLEKLADVKA++QGGYPQAERCR+SVG
Sbjct: 83   VKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAIAQGGYPQAERCRISVG 142

Query: 899  HSEAMPSIPDIVAALSIAGNFGFQPCSHGDFLGAILGTGIAREKLGDILLQGEKGAQILV 720
            H E + S PDI++ALSI GNF F+PCSHGDFLG+ILGTGI REKLGDI+LQGE+GAQI+V
Sbjct: 143  HPEELTSDPDIISALSITGNFQFEPCSHGDFLGSILGTGIVREKLGDIILQGEQGAQIIV 202

Query: 719  VPELVDFLVSSLDKVGNVPVSCTKIPLLALEYEPPRTKSFKTIEASLRVDALASAGFKVS 540
            VPELV+FL+S+L KV NVPVSCTKIPL++L+YEPPRTKSFKTIEASLRVDALASAGFKVS
Sbjct: 203  VPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKVS 262

Query: 539  RSKLVDLISNGDVRVNWTPVSKNGATLKTGDMVSVSGKGRLQIGEIKTTKKGKFAVELIQ 360
            RSKLVD+ISNGDVR+NW PV+  G TLK+GD+VS+SGKGRL+IGEI +TKKGKFAVELI+
Sbjct: 263  RSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGKGRLKIGEINSTKKGKFAVELIR 322

Query: 359  YL 354
            YL
Sbjct: 323  YL 324


>ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH-like [Cucumis sativus]
            gi|449495519|ref|XP_004159865.1| PREDICTED: putative
            RNA-binding protein YlmH-like [Cucumis sativus]
          Length = 319

 Score =  377 bits (969), Expect = e-102
 Identities = 189/279 (67%), Positives = 227/279 (81%)
 Frame = -3

Query: 1190 PPNPSSVAGICHVVHAXXXXXXXXXXXXXXXKSSIDAVKNILEMXXXXXXXREAFHTDFL 1011
            P +P   +GIC +V A                  +D VK IL M       RE  HT+FL
Sbjct: 42   PSSPLGTSGICQLVQAVKGDIDVLLNGVGDKGVIVD-VKQILVMAKRSLSRREVLHTNFL 100

Query: 1010 TPPILKESILVLEKLADVKAVSQGGYPQAERCRLSVGHSEAMPSIPDIVAALSIAGNFGF 831
            TPP++KES+L ++KLADVKA++QGGYP+AERCR+SVGH++ + S PDI++ALSI GNF F
Sbjct: 101  TPPVVKESMLAIQKLADVKAIAQGGYPEAERCRISVGHADELTSDPDIISALSITGNFTF 160

Query: 830  QPCSHGDFLGAILGTGIAREKLGDILLQGEKGAQILVVPELVDFLVSSLDKVGNVPVSCT 651
             PCSHGDFLG+ILGTGIAREKLGDI+LQ E GAQ+++VPELVDFL+SSL KVGNV VSCT
Sbjct: 161  HPCSHGDFLGSILGTGIAREKLGDIMLQEETGAQVVIVPELVDFLISSLRKVGNVTVSCT 220

Query: 650  KIPLLALEYEPPRTKSFKTIEASLRVDALASAGFKVSRSKLVDLISNGDVRVNWTPVSKN 471
            +IPL ALEYEPP+TK+FKTIEASLRVDA+ASAGFK+SRSKLVDLIS+GDVRVNWT ++KN
Sbjct: 221  RIPLTALEYEPPKTKTFKTIEASLRVDAIASAGFKISRSKLVDLISSGDVRVNWTSITKN 280

Query: 470  GATLKTGDMVSVSGKGRLQIGEIKTTKKGKFAVELIQYL 354
            G  LKTGD+VSVSGKGRL+IGEI +TKKGKFAVELI+Y+
Sbjct: 281  GTILKTGDIVSVSGKGRLKIGEINSTKKGKFAVELIRYV 319


>ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|222859964|gb|EEE97511.1|
            predicted protein [Populus trichocarpa]
          Length = 268

 Score =  377 bits (967), Expect = e-102
 Identities = 192/247 (77%), Positives = 214/247 (86%)
 Frame = -3

Query: 1094 SSIDAVKNILEMXXXXXXXREAFHTDFLTPPILKESILVLEKLADVKAVSQGGYPQAERC 915
            S I+ VK IL+M       RE  HTDFLTPP LKES+ VLEKLADVKA++QGGYPQAERC
Sbjct: 22   SVIEEVKRILDMARRASLRREVLHTDFLTPPTLKESLHVLEKLADVKAIAQGGYPQAERC 81

Query: 914  RLSVGHSEAMPSIPDIVAALSIAGNFGFQPCSHGDFLGAILGTGIAREKLGDILLQGEKG 735
            RLSVGH E + S PDIVAALSI GNFGFQ CSHGDFLGAILGTGIAR KLGDI++ G K 
Sbjct: 82   RLSVGHPETLTSDPDIVAALSITGNFGFQLCSHGDFLGAILGTGIARNKLGDIIVLGGKR 141

Query: 734  AQILVVPELVDFLVSSLDKVGNVPVSCTKIPLLALEYEPPRTKSFKTIEASLRVDALASA 555
            AQ+L+VP+LVD++VSSLDKVG+V VSCT IPL A+EYEPPRTKSFKT+EASLRVDALASA
Sbjct: 142  AQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEYEPPRTKSFKTVEASLRVDALASA 201

Query: 554  GFKVSRSKLVDLISNGDVRVNWTPVSKNGATLKTGDMVSVSGKGRLQIGEIKTTKKGKFA 375
            GFK+SRSKLVDLISN DVRVNWT ++KN  TLKTGD+VSVSGKGRL+IGEI TT+KGKFA
Sbjct: 202  GFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDVVSVSGKGRLKIGEINTTRKGKFA 261

Query: 374  VELIQYL 354
            VELI YL
Sbjct: 262  VELIHYL 268