BLASTX nr result

ID: Cimicifuga21_contig00005573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005573
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252...   166   3e-39
ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261...   160   1e-37
ref|XP_002513883.1| conserved hypothetical protein [Ricinus comm...   160   2e-37
emb|CBI41084.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_002306588.1| predicted protein [Populus trichocarpa] gi|1...   157   2e-36

>ref|XP_002285807.2| PREDICTED: uncharacterized protein LOC100252409 [Vitis vinifera]
          Length = 208

 Score =  166 bits (420), Expect = 3e-39
 Identities = 94/167 (56%), Positives = 109/167 (65%), Gaps = 28/167 (16%)
 Frame = +3

Query: 60  AEAEEKMMLGKRPRPHIKRTTSITEFTVDLGYLEASRPSDQQ------------------ 185
           A AEEKM+LGKRPRP +KRTTS+TEFT+D   ++   PSD Q                  
Sbjct: 46  AAAEEKMLLGKRPRPPMKRTTSMTEFTLDPNSVQQP-PSDSQNPFKDRPKSVGFGGDPYR 104

Query: 186 ----------DHRFTNKTHSPRTQRRNSADFVETSHFLRSCGLCNRRLAPGRDIFMYRGD 335
                     DHRF +   SPR  RR SADFV+ SHFLR+C LC RRL  GRDI+MYRGD
Sbjct: 105 QPSGVDGYGFDHRFLSAV-SPRNPRRYSADFVDNSHFLRACCLCKRRLVSGRDIYMYRGD 163

Query: 336 TAFCSQECRQQQMNQDERKEKCSVASNKEASASVGSETSSKGGTIAA 476
           +AFCS ECRQQQMNQDERKEKCS+AS KEA+AS      S+G T+AA
Sbjct: 164 SAFCSLECRQQQMNQDERKEKCSLASKKEATAST---AGSEGETVAA 207


>ref|XP_003635513.1| PREDICTED: uncharacterized protein LOC100261790 [Vitis vinifera]
          Length = 160

 Score =  160 bits (406), Expect = 1e-37
 Identities = 90/160 (56%), Positives = 106/160 (66%), Gaps = 26/160 (16%)
 Frame = +3

Query: 78  MMLGKRPRPHIKRTTSITEFTVDLGYLEASRPSDQQ----------------------DH 191
           MMLGKR RP IKRTTS+T  TVDLG++EA  P+D Q                      D 
Sbjct: 1   MMLGKRARPQIKRTTSMTGITVDLGHVEAPAPADPQNPIKDVHAAARVENMVAGSNGYDP 60

Query: 192 RFTNKTHSPRTQRRNSADFVETSHFLRSCGLCNRRLAPGRDIFMYRGDTAFCSQECRQQQ 371
           RF   T SPR  RR+S +F+ET+HFLR+CGLC RRL PGRDI+MYRGDTAFCS ECR+QQ
Sbjct: 61  RFLAATVSPRIHRRSSGEFMETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQ 120

Query: 372 MNQDERKEKCS-VASNKE---ASASVGSETSSKGGTIAAA 479
           M QDERKEK S +AS KE     AS  +  +S+G T+AAA
Sbjct: 121 MKQDERKEKYSGMASKKEDHRHHASAQTAAASEGETLAAA 160


>ref|XP_002513883.1| conserved hypothetical protein [Ricinus communis]
           gi|223546969|gb|EEF48466.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 172

 Score =  160 bits (405), Expect = 2e-37
 Identities = 88/153 (57%), Positives = 107/153 (69%), Gaps = 20/153 (13%)
 Frame = +3

Query: 78  MMLGKRPRPHIKRTTSITEFTVDL---GYLEASRPS--------------DQQDHRF-TN 203
           M+LGKRPRP +KRTTS++E T DL   G  E+++ +               Q D RF   
Sbjct: 1   MLLGKRPRPPMKRTTSLSEITFDLDTNGSCESAQQAAGFGGDGTGTGGGQQQLDQRFLAA 60

Query: 204 KTHSPRTQRRNSADFVETSHFLRSCGLCNRRLAPGRDIFMYRGDTAFCSQECRQQQMNQD 383
            T SPR  RR SADF+ET+HFLRSC LC+RRL  GRDI+MYRGD+AFCS ECRQQQMNQD
Sbjct: 61  ATISPRNHRRASADFLETAHFLRSCSLCHRRLVTGRDIYMYRGDSAFCSLECRQQQMNQD 120

Query: 384 ERKEKCSVASNKEASAS--VGSETSSKGGTIAA 476
           ERKEKCS+AS KE ++S   G++ S+KG T AA
Sbjct: 121 ERKEKCSLASKKEVTSSTVAGADVSAKGETAAA 153


>emb|CBI41084.3| unnamed protein product [Vitis vinifera]
          Length = 189

 Score =  158 bits (399), Expect = 1e-36
 Identities = 86/139 (61%), Positives = 103/139 (74%), Gaps = 4/139 (2%)
 Frame = +3

Query: 72  EKMMLGKRPRPHIKRTTSITEFTVDLGYLEASRPSDQQDHRFTNKTHSPRTQRRNSADFV 251
           +KMMLGKR RP IKRTTS+T  TVDLG+   +  S+  D RF   T SPR  RR+S +F+
Sbjct: 7   KKMMLGKRARPQIKRTTSMTGITVDLGHNMVAG-SNGYDPRFLAATVSPRIHRRSSGEFM 65

Query: 252 ETSHFLRSCGLCNRRLAPGRDIFMYRGDTAFCSQECRQQQMNQDERKEKCS-VASNKE-- 422
           ET+HFLR+CGLC RRL PGRDI+MYRGDTAFCS ECR+QQM QDERKEK S +AS KE  
Sbjct: 66  ETAHFLRTCGLCQRRLQPGRDIYMYRGDTAFCSLECREQQMKQDERKEKYSGMASKKEDH 125

Query: 423 -ASASVGSETSSKGGTIAA 476
              AS  +  +S+G T+AA
Sbjct: 126 RHHASAQTAAASEGETLAA 144


>ref|XP_002306588.1| predicted protein [Populus trichocarpa] gi|118489780|gb|ABK96690.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222856037|gb|EEE93584.1| predicted protein [Populus
           trichocarpa]
          Length = 148

 Score =  157 bits (397), Expect = 2e-36
 Identities = 87/147 (59%), Positives = 105/147 (71%), Gaps = 14/147 (9%)
 Frame = +3

Query: 78  MMLGKRPRPHIKRTTSITEFTVDLGYL--EASRPSDQQ----------DHRFTNKTHSPR 221
           M+LGKRPR  +KRTTS+TE   DL     EA+ PSD            D R +  T SPR
Sbjct: 1   MLLGKRPRNPMKRTTSLTEIKFDLNTASSEAAPPSDHPQKQVGYGGMIDQRSSAATGSPR 60

Query: 222 TQ-RRNSADFVETSHFLRSCGLCNRRLAPGRDIFMYRGDTAFCSQECRQQQMNQDERKEK 398
           T  RR SADF+ET +FLR+C LC RRL PGRDI+MY+GD+AFCSQECRQQQM+ DERKEK
Sbjct: 61  TSHRRASADFLETPNFLRACSLCKRRLIPGRDIYMYKGDSAFCSQECRQQQMSLDERKEK 120

Query: 399 CSVASNKEA-SASVGSETSSKGGTIAA 476
           CS+AS KEA S++  +E S+KG T+AA
Sbjct: 121 CSLASKKEAVSSTTATEVSAKGETVAA 147


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