BLASTX nr result

ID: Cimicifuga21_contig00005546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005546
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1...   417   e-114
ref|XP_002510957.1| conserved hypothetical protein [Ricinus comm...   408   e-111
ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|2...   399   e-108
emb|CBI16603.3| unnamed protein product [Vitis vinifera]              395   e-107
ref|XP_002511632.1| conserved hypothetical protein [Ricinus comm...   395   e-107

>ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1 [Vitis vinifera]
            gi|296084213|emb|CBI24601.3| unnamed protein product
            [Vitis vinifera]
          Length = 239

 Score =  417 bits (1072), Expect = e-114
 Identities = 181/240 (75%), Positives = 211/240 (87%)
 Frame = -1

Query: 1148 MADGNVQSRYVKLTKDQDAPMEEIKPGELNQPVEVPQLDIRRCHECGQTLPDSYEPPADE 969
            MA+G V SRYVKLTKDQ  P+EEIKPGELNQP++VPQL++R+C+ECGQ LP+SYEPPA+E
Sbjct: 1    MAEGAVHSRYVKLTKDQ-GPVEEIKPGELNQPIDVPQLNVRKCNECGQPLPESYEPPANE 59

Query: 968  AWMTGIFGCTEDTDSCWTGLFCPCVLFGRNVESMRDDIPWTNPCVCHAICVEGGIALAAA 789
             W TGIFGC EDT+SCWTGLFCPCVLFGRN+ES+R+D PWT PC+CHAIC+EGGIALA  
Sbjct: 60   PWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLREDTPWTTPCICHAICIEGGIALAIG 119

Query: 788  TAIFHGVDPRTSFLIGEGLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCVVHCCLHWC 609
            T +FHG+DPRTSFLI EGLLFAWWMCGIYTGL RQSLQKKYHL++SPCDPC+VHCC+HWC
Sbjct: 120  TGVFHGIDPRTSFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLQNSPCDPCMVHCCMHWC 179

Query: 608  ALCQEHREMKGRLSDNVVMPMTVINPPPVQEMTSNENAGESPSTSTNGGGEHASLETQTL 429
            ALCQEHREMKGRLS+++VMPMT++NPPPVQEM S EN  +  + S+  G EH  LE Q L
Sbjct: 180  ALCQEHREMKGRLSEDLVMPMTIVNPPPVQEMNSEENNQQDAAPSSAKGTEHTHLEMQAL 239


>ref|XP_002510957.1| conserved hypothetical protein [Ricinus communis]
            gi|223550072|gb|EEF51559.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 236

 Score =  408 bits (1049), Expect = e-111
 Identities = 180/240 (75%), Positives = 211/240 (87%)
 Frame = -1

Query: 1148 MADGNVQSRYVKLTKDQDAPMEEIKPGELNQPVEVPQLDIRRCHECGQTLPDSYEPPADE 969
            MA+ +  SRYVKLTK+Q A +E+IKPGELNQP+EVPQL++R+C+ECGQ LP+++EPPADE
Sbjct: 2    MAEASAHSRYVKLTKEQ-AAIEDIKPGELNQPIEVPQLNVRKCNECGQPLPENFEPPADE 60

Query: 968  AWMTGIFGCTEDTDSCWTGLFCPCVLFGRNVESMRDDIPWTNPCVCHAICVEGGIALAAA 789
             W TGIFGCTEDT+SCWTGLFCPCVLFGRNVES+RDD PWT PC+CHA+C+EGG+ALAAA
Sbjct: 61   PWTTGIFGCTEDTESCWTGLFCPCVLFGRNVESLRDDTPWTTPCICHAVCIEGGMALAAA 120

Query: 788  TAIFHGVDPRTSFLIGEGLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCVVHCCLHWC 609
            TAIFHGVDPRTSFL+ EGLLFAWWMCGIYTGL RQSLQ+KYHL++SPCDPC+VHCC+HWC
Sbjct: 121  TAIFHGVDPRTSFLVCEGLLFAWWMCGIYTGLVRQSLQRKYHLRNSPCDPCMVHCCMHWC 180

Query: 608  ALCQEHREMKGRLSDNVVMPMTVINPPPVQEMTSNENAGESPSTSTNGGGEHASLETQTL 429
            ALCQEHREMKGRLSDN VMPMT++NPPPVQEM S  +  +S  +S  G     +LE Q L
Sbjct: 181  ALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMNSASDNRDSEPSSEKG----TNLEMQPL 236


>ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|222841841|gb|EEE79388.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  399 bits (1024), Expect = e-108
 Identities = 180/241 (74%), Positives = 209/241 (86%), Gaps = 1/241 (0%)
 Frame = -1

Query: 1148 MADGNVQSRYVKLTKDQDAPMEEIKPGELNQPVEVPQLDIRRCHECGQTLPDSYEPPADE 969
            MA+GNV SRYVKLTK+Q   +EEIKPGELNQP+EVP L++ +C+ECGQ LP++++PPADE
Sbjct: 1    MAEGNV-SRYVKLTKEQTG-VEEIKPGELNQPIEVPHLEVCKCNECGQPLPENFQPPADE 58

Query: 968  AWMTGIFGCTEDTDSCWTGLFCPCVLFGRNVESMRDDIPWTNPCVCHAICVEGGIALAAA 789
             W TGIFGC EDT+SCWTGLFCPCVLFGRN+ES+RDD PWT PCVCHA+CVEGGIALAAA
Sbjct: 59   PWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLRDDTPWTTPCVCHAVCVEGGIALAAA 118

Query: 788  TAIFHGVDPRTSFLIGEGLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCVVHCCLHWC 609
            TA+FHG++P T FLI EGLLFAWWMCGIYTGL RQSLQKKYHLK+SPCDPC+VHCC+HWC
Sbjct: 119  TAVFHGINPDTPFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMVHCCMHWC 178

Query: 608  ALCQEHREMKGRLSDNVVMPMTVINPPPVQEMT-SNENAGESPSTSTNGGGEHASLETQT 432
            ALCQEHREMKGRLSDN VMPMT++NPPPVQEM+ + EN   +PS+      +  SLE Q 
Sbjct: 179  ALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMSATTENQDSTPSSE-----KSTSLEMQP 233

Query: 431  L 429
            L
Sbjct: 234  L 234


>emb|CBI16603.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  395 bits (1014), Expect = e-107
 Identities = 176/244 (72%), Positives = 205/244 (84%), Gaps = 1/244 (0%)
 Frame = -1

Query: 1157 SLKMADGNVQS-RYVKLTKDQDAPMEEIKPGELNQPVEVPQLDIRRCHECGQTLPDSYEP 981
            S KM++G  QS RYVKL KDQ AP+E+I PGELNQP+EVPQL + RC+ECGQ LP+SY+P
Sbjct: 37   SFKMSEGIAQSSRYVKLKKDQ-APVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQP 95

Query: 980  PADEAWMTGIFGCTEDTDSCWTGLFCPCVLFGRNVESMRDDIPWTNPCVCHAICVEGGIA 801
            PADE W TGI GC ED +SCWTGLFCPCVLFG NVE +R+DIPWTN CVCHA+CVEGG+ 
Sbjct: 96   PADEDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMT 155

Query: 800  LAAATAIFHGVDPRTSFLIGEGLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCVVHCC 621
            LAAATA+FHG+DP+TSFLI EGLLF WWMCGIYTGLFRQSLQK+YHLK+SPCDPC+VHCC
Sbjct: 156  LAAATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCC 215

Query: 620  LHWCALCQEHREMKGRLSDNVVMPMTVINPPPVQEMTSNENAGESPSTSTNGGGEHASLE 441
            +HWCA+CQEHREMKG LS N  MPMT++NPPPVQEM +  N   +P  S+  G EH ++E
Sbjct: 216  MHWCAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAP--SSKNGTEHTTME 273

Query: 440  TQTL 429
             Q L
Sbjct: 274  IQPL 277


>ref|XP_002511632.1| conserved hypothetical protein [Ricinus communis]
            gi|223548812|gb|EEF50301.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 239

 Score =  395 bits (1014), Expect = e-107
 Identities = 176/238 (73%), Positives = 202/238 (84%)
 Frame = -1

Query: 1148 MADGNVQSRYVKLTKDQDAPMEEIKPGELNQPVEVPQLDIRRCHECGQTLPDSYEPPADE 969
            MADGN QSRYVKLTKDQ +P+E+I PGELNQP++VPQL I RC ECGQ LP+SYEPPADE
Sbjct: 1    MADGNAQSRYVKLTKDQ-SPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADE 59

Query: 968  AWMTGIFGCTEDTDSCWTGLFCPCVLFGRNVESMRDDIPWTNPCVCHAICVEGGIALAAA 789
             W TGI  C ED DSC TGLFCPCVLFG NVE++R+DIPW N CVCHA+CVEGG+ALAAA
Sbjct: 60   DWTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAA 119

Query: 788  TAIFHGVDPRTSFLIGEGLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCVVHCCLHWC 609
            TA FHG+DP+TSFLI EGL FAWWMCGIYTGLFRQSLQKKYHLK+SPCDPC+VHCC+HWC
Sbjct: 120  TAFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 179

Query: 608  ALCQEHREMKGRLSDNVVMPMTVINPPPVQEMTSNENAGESPSTSTNGGGEHASLETQ 435
            ALCQEHREMK  LSDN  M MTV+NPPPVQ+M ++E+   +P   ++  GE+ +LE Q
Sbjct: 180  ALCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQ 237


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