BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005530
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   628   e-177
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   628   e-177
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   627   e-177
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   619   e-175
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   619   e-175

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  628 bits (1620), Expect = e-177
 Identities = 315/405 (77%), Positives = 343/405 (84%)
 Frame = +3

Query: 291  HSNEPELLMVYGGKVSRVMETGCFVQLNDFRGKEGLVHVSQMASRRIPNAKDVVKRGQEV 470
            HS+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR QEV
Sbjct: 213  HSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEV 272

Query: 471  FVKVISMTGQKMNLSMRDVDQNTGKDLIPMKKRSEDDSSRMNPQSSNQGPTSRTGLSGIK 650
            +VKVIS++GQK++LSMRDVDQNTG+DLIP+KK  EDD+ R NP  +NQGP SRTGLSGI+
Sbjct: 273  YVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIR 332

Query: 651  ITEDDGQASSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXX 830
            I E++  A SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG            
Sbjct: 333  IVEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEEL 392

Query: 831  XXXXXXXXPAFLQGQTRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTM 1010
                    PAFLQGQ+RYS+DMSPVKIFKNPEG            IK           TM
Sbjct: 393  EIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTM 452

Query: 1011 LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSI 1190
            LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQRSKLSI
Sbjct: 453  LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSI 512

Query: 1191 QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 1370
            QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP
Sbjct: 513  QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 572

Query: 1371 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTD 1505
            RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTD
Sbjct: 573  RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 617


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  628 bits (1620), Expect = e-177
 Identities = 315/405 (77%), Positives = 343/405 (84%)
 Frame = +3

Query: 291  HSNEPELLMVYGGKVSRVMETGCFVQLNDFRGKEGLVHVSQMASRRIPNAKDVVKRGQEV 470
            HS+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR QEV
Sbjct: 216  HSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEV 275

Query: 471  FVKVISMTGQKMNLSMRDVDQNTGKDLIPMKKRSEDDSSRMNPQSSNQGPTSRTGLSGIK 650
            +VKVIS++GQK++LSMRDVDQNTG+DLIP+KK  EDD+ R NP  +NQGP SRTGLSGI+
Sbjct: 276  YVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGANQGPVSRTGLSGIR 335

Query: 651  ITEDDGQASSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXX 830
            I E++  A SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG            
Sbjct: 336  IVEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEEL 395

Query: 831  XXXXXXXXPAFLQGQTRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTM 1010
                    PAFLQGQ+RYS+DMSPVKIFKNPEG            IK           TM
Sbjct: 396  EIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTM 455

Query: 1011 LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSI 1190
            LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQRSKLSI
Sbjct: 456  LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSI 515

Query: 1191 QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 1370
            QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP
Sbjct: 516  QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 575

Query: 1371 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTD 1505
            RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTD
Sbjct: 576  RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 620


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  627 bits (1618), Expect = e-177
 Identities = 315/405 (77%), Positives = 342/405 (84%)
 Frame = +3

Query: 291  HSNEPELLMVYGGKVSRVMETGCFVQLNDFRGKEGLVHVSQMASRRIPNAKDVVKRGQEV 470
            HS+EPEL  VY G+VSRVM+TGCFVQLND +GKEGLVHVSQ+A+RR+ NAKDVVKR QEV
Sbjct: 225  HSDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKDVVKRDQEV 284

Query: 471  FVKVISMTGQKMNLSMRDVDQNTGKDLIPMKKRSEDDSSRMNPQSSNQGPTSRTGLSGIK 650
            +VKVIS++GQK++LSMRDVDQNTG+DLIP+KK  EDD+ R NP   NQGP SRTGLSGI+
Sbjct: 285  YVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGXNQGPVSRTGLSGIR 344

Query: 651  ITEDDGQASSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXX 830
            I E++  A SRRPLKRMSSPEKWEAKQL+A+GV+DIRE PMYD++ DG            
Sbjct: 345  IVEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEEL 404

Query: 831  XXXXXXXXPAFLQGQTRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTM 1010
                    PAFLQGQ+RYS+DMSPVKIFKNPEG            IK           TM
Sbjct: 405  EIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTM 464

Query: 1011 LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSI 1190
            LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQRSKLSI
Sbjct: 465  LDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSI 524

Query: 1191 QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 1370
            QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP
Sbjct: 525  QEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQP 584

Query: 1371 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTD 1505
            RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTD
Sbjct: 585  RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 629


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  619 bits (1596), Expect = e-175
 Identities = 311/406 (76%), Positives = 342/406 (84%), Gaps = 2/406 (0%)
 Frame = +3

Query: 294  SNEPELLMVYGGKVSRVMETGCFVQLNDFRGKEGLVHVSQMASRRIPNAKDVVKRGQEVF 473
            S++PEL  VY G+VSRVM++GCFVQLNDFRGKEGLVHVSQMA+RRI NAKDVVKR Q+VF
Sbjct: 217  SSDPELYRVYKGRVSRVMDSGCFVQLNDFRGKEGLVHVSQMATRRIANAKDVVKRDQDVF 276

Query: 474  VKVISMTGQKMNLSMRDVDQNTGKDLIPMKKRS--EDDSSRMNPQSSNQGPTSRTGLSGI 647
            VKVIS++GQK++LSMRDVDQN+GKDL+P+KK S  +DDS R NP  S +GP +RTGLSGI
Sbjct: 277  VKVISVSGQKLSLSMRDVDQNSGKDLLPLKKSSGDDDDSLRTNPSGSKEGPVTRTGLSGI 336

Query: 648  KITEDDGQASSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXX 827
            +I E+D    SRRPLKRMSSPE+WEAKQL+A+GV+ ++E+PMYD++ DG           
Sbjct: 337  RILEEDDAVPSRRPLKRMSSPERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEE 396

Query: 828  XXXXXXXXXPAFLQGQTRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXT 1007
                     PAFLQGQTRYS+DMSPVKIFKNPEG            IK           T
Sbjct: 397  LEIELNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRT 456

Query: 1008 MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLS 1187
            MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GKALTFGQRSKLS
Sbjct: 457  MLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 516

Query: 1188 IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 1367
            IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ
Sbjct: 517  IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 576

Query: 1368 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTD 1505
            PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTD
Sbjct: 577  PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 622


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  619 bits (1595), Expect = e-175
 Identities = 309/404 (76%), Positives = 339/404 (83%)
 Frame = +3

Query: 294  SNEPELLMVYGGKVSRVMETGCFVQLNDFRGKEGLVHVSQMASRRIPNAKDVVKRGQEVF 473
            S E EL  VY G++SRVMETGCFVQL+DFRGKEGLVHVSQMA+RRI NAKDVVKR QEV+
Sbjct: 245  SGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHVSQMATRRITNAKDVVKRDQEVY 304

Query: 474  VKVISMTGQKMNLSMRDVDQNTGKDLIPMKKRSEDDSSRMNPQSSNQGPTSRTGLSGIKI 653
            VKVIS++GQK++LSMRDVDQ+TGKDL+P+KK SEDD+ RMNPQ S  GP +RTGLSGI+I
Sbjct: 305  VKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAMRMNPQDSKGGPAARTGLSGIRI 364

Query: 654  TEDDGQASSRRPLKRMSSPEKWEAKQLMAAGVMDIREHPMYDEDEDGXXXXXXXXXXXXX 833
             E+D   SSRRPLKRMSSPE+WEAKQL+A+GV+ + E+P YD++ DG             
Sbjct: 365  VEEDDAGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAEEELE 424

Query: 834  XXXXXXXPAFLQGQTRYSIDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXXXXXXTML 1013
                   PAFLQGQ+RYS+DMSPVKIFKNPEG            IK           TML
Sbjct: 425  IELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTML 484

Query: 1014 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKALTFGQRSKLSIQ 1193
            DSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDMPEWKKDAYGK +TFGQRSKLSIQ
Sbjct: 485  DSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQ 544

Query: 1194 EQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 1373
            EQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR
Sbjct: 545  EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 604

Query: 1374 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPETVIKYMTD 1505
            RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP+TVIKYMTD
Sbjct: 605  RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 648