BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005506
         (1506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...   438   e-120
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...   436   e-120
ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...   421   e-115
ref|XP_003540749.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109

>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  438 bits (1126), Expect = e-120
 Identities = 211/291 (72%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
 Frame = -1

Query: 1503 ELFNYASQQPRFRHDVSTYHLTIKKLGTAQMYEEMEGVVNQVLAVPTIGSEALFNTIIYF 1324
            ELFN+ASQQPRFRHD S+Y +TIKKLG A+MYEEM+ VVNQ LAV +IGSE L+NT+IYF
Sbjct: 138  ELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYF 197

Query: 1323 YTEARQLAKAVNVYKHMKRSFDLNCRPSVRTYNLLFTSFLSKRNNSYINHMYMETIRCLF 1144
            +TEAR+L +AVN++KHM+ + +LNCRPS+RTYNLLFT+FLS+  N+YINHMYMETIRCLF
Sbjct: 198  FTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLF 257

Query: 1143 KQMVND-GVEPDIFSLNSMIKGYILSLHVNDALRMFHQMGVVYTCHPDSHSYNYLIHGLC 967
            +QMVND G+EPDIFSLN MIKGY+LSLHVNDALR+FHQMGVVY+C P+S+SY+YLIHGLC
Sbjct: 258  RQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLC 317

Query: 966  CQGRTNNAKELYTEMVTKGFVPSGKAYNSLANSLAICGEVEEAVRLLWEMNEKRRSADFI 787
             Q RT+NAKEL  EM  KGFVPS  +YNS+ N+LA+ GEVE+AV  LWEM + RRS DFI
Sbjct: 318  AQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFI 377

Query: 786  TYRTVLDEICRQGKVEEAVRLLKEFLEKDLVDGLTYKKLLYVTEDELGDSN 634
            TY+TVLDE+CRQGKV EA  LL+E  EKDLVDG TY+KLLYV ED+ G+ N
Sbjct: 378  TYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 428


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Cucumis sativus]
          Length = 428

 Score =  436 bits (1122), Expect = e-120
 Identities = 210/291 (72%), Positives = 252/291 (86%), Gaps = 1/291 (0%)
 Frame = -1

Query: 1503 ELFNYASQQPRFRHDVSTYHLTIKKLGTAQMYEEMEGVVNQVLAVPTIGSEALFNTIIYF 1324
            ELFN+ASQQPRFRHD S+Y +TIKKLG A+MYEEM+ VVNQ LAV +IGSE L+NT+IYF
Sbjct: 138  ELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSIGSETLYNTMIYF 197

Query: 1323 YTEARQLAKAVNVYKHMKRSFDLNCRPSVRTYNLLFTSFLSKRNNSYINHMYMETIRCLF 1144
            +TEAR+L +AVN++KHM+ + +LNCRPS+RTYNLLFT+FLS+  N+YINHMYMETIRCLF
Sbjct: 198  FTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLF 257

Query: 1143 KQMVND-GVEPDIFSLNSMIKGYILSLHVNDALRMFHQMGVVYTCHPDSHSYNYLIHGLC 967
            +QMVND G+EPDIFSLN MIKGY+LSLHVNDALR+FHQMGVVY+C P+S+S++YLIHGLC
Sbjct: 258  RQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLC 317

Query: 966  CQGRTNNAKELYTEMVTKGFVPSGKAYNSLANSLAICGEVEEAVRLLWEMNEKRRSADFI 787
             Q RT+NAKEL  EM  KGFVPS  +YNS+ N+LA+ GEVE+AV  LWEM + RRS DFI
Sbjct: 318  AQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFI 377

Query: 786  TYRTVLDEICRQGKVEEAVRLLKEFLEKDLVDGLTYKKLLYVTEDELGDSN 634
            TY+TVLDE+CRQGKV EA  LL+E  EKDLVDG TY+KLLYV ED+ G+ N
Sbjct: 378  TYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGNLN 428


>ref|XP_002324476.1| predicted protein [Populus trichocarpa] gi|222865910|gb|EEF03041.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  436 bits (1122), Expect = e-120
 Identities = 208/291 (71%), Positives = 253/291 (86%)
 Frame = -1

Query: 1506 LELFNYASQQPRFRHDVSTYHLTIKKLGTAQMYEEMEGVVNQVLAVPTIGSEALFNTIIY 1327
            LELFN+ASQQ RFRHD STYH+TIKKLG A+MY+EM+ VVNQ+LAVP IG+EAL+N+IIY
Sbjct: 143  LELFNWASQQHRFRHDASTYHVTIKKLGIAKMYQEMDDVVNQLLAVPHIGNEALYNSIIY 202

Query: 1326 FYTEARQLAKAVNVYKHMKRSFDLNCRPSVRTYNLLFTSFLSKRNNSYINHMYMETIRCL 1147
            ++TEAR+L +AVN++K MK S +L+CRPS++TYN+L T+ LS+  NSYINHMYMET+RCL
Sbjct: 203  YFTEARKLTRAVNIFKRMKSSRNLDCRPSIKTYNILLTAMLSRGRNSYINHMYMETMRCL 262

Query: 1146 FKQMVNDGVEPDIFSLNSMIKGYILSLHVNDALRMFHQMGVVYTCHPDSHSYNYLIHGLC 967
            FKQMV+DGVEPDIFSLNSMIKGY LSLHVNDALR+FHQMGVVY C P+S SY+YL+HGLC
Sbjct: 263  FKQMVDDGVEPDIFSLNSMIKGYALSLHVNDALRVFHQMGVVYKCLPNSFSYDYLVHGLC 322

Query: 966  CQGRTNNAKELYTEMVTKGFVPSGKAYNSLANSLAICGEVEEAVRLLWEMNEKRRSADFI 787
             QGRTNNA+EL+ EM  KGFV S K++NSL N+LA+ GEV EAV  LWEM +K RS D I
Sbjct: 323  AQGRTNNARELFDEMKEKGFVLSNKSFNSLVNALALGGEVGEAVNYLWEMIDKHRSVDLI 382

Query: 786  TYRTVLDEICRQGKVEEAVRLLKEFLEKDLVDGLTYKKLLYVTEDELGDSN 634
            TY+TVLDEICRQG++ EA  LLKE+ EKDLVDG+TY++LL+V ED+ G+SN
Sbjct: 383  TYKTVLDEICRQGRIGEATSLLKEWQEKDLVDGITYRELLHVLEDDFGNSN 433


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355507514|gb|AES88656.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  421 bits (1083), Expect = e-115
 Identities = 204/295 (69%), Positives = 253/295 (85%), Gaps = 2/295 (0%)
 Frame = -1

Query: 1506 LELFNYASQQPRFRHDVSTYHLTIKKLGTAQMYEEMEGVVNQVLAVPTIGSEALFNTIIY 1327
            LELF++AS QPRFRH+ S++H+TIKKLG A+MY+EM+ VVNQ+LAV +IG+EALFN IIY
Sbjct: 114  LELFHWASHQPRFRHNESSFHVTIKKLGDAKMYQEMDDVVNQLLAVRSIGNEALFNMIIY 173

Query: 1326 FYTEARQLAKAVNVYKHMK--RSFDLNCRPSVRTYNLLFTSFLSKRNNSYINHMYMETIR 1153
            ++TEAR+L +AV V+KHMK  R+ +   RPS+RTYN+LF +FLS+  N++IN +YMET+R
Sbjct: 174  YFTEARKLTRAVIVFKHMKCSRNPNFGFRPSIRTYNILFGAFLSRGYNTHINLVYMETMR 233

Query: 1152 CLFKQMVNDGVEPDIFSLNSMIKGYILSLHVNDALRMFHQMGVVYTCHPDSHSYNYLIHG 973
            CLF+QMVN+ +EPDIFSLNSMIKGY+LSLHVNDALR+FHQMGVVY C P+S +Y+YLIHG
Sbjct: 234  CLFRQMVNEHIEPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYDYLIHG 293

Query: 972  LCCQGRTNNAKELYTEMVTKGFVPSGKAYNSLANSLAICGEVEEAVRLLWEMNEKRRSAD 793
            LC +GRT NAKELY EM  KGFVPS K+YNSL NSLA+ G+VEEAV  LWEM EK++S D
Sbjct: 294  LCAKGRTENAKELYHEMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVD 353

Query: 792  FITYRTVLDEICRQGKVEEAVRLLKEFLEKDLVDGLTYKKLLYVTEDELGDSNIK 628
            FITYRTVLDEICR+G+V+EA+R L+E  EKDLVDG TY+KLLYV ED+ GDS  +
Sbjct: 354  FITYRTVLDEICRRGRVQEAMRFLQELQEKDLVDGHTYRKLLYVLEDDYGDSETR 408


>ref|XP_003540749.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
            mitochondrial-like [Glycine max]
          Length = 438

 Score =  400 bits (1027), Expect = e-109
 Identities = 189/267 (70%), Positives = 231/267 (86%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1431 KLGTAQMYEEMEGVVNQVLAVPTIGSEALFNTIIYFYTEARQLAKAVNVYKHMKRSFDLN 1252
            KLG A+MY+EM+ +VNQ+LAVP IGSEALFN +IY++T+AR+L +AVNV+KHMK   +LN
Sbjct: 145  KLGAAKMYQEMDDIVNQLLAVPLIGSEALFNMVIYYFTQARKLTRAVNVFKHMKSRRNLN 204

Query: 1251 C--RPSVRTYNLLFTSFLSKRNNSYINHMYMETIRCLFKQMVNDGVEPDIFSLNSMIKGY 1078
            C  RPS+RTYN+LF +FL + +NSYINH+YMETIRCLF+QMV DG++PDIFSLNSMIKGY
Sbjct: 205  CFFRPSIRTYNILFAAFLGRGSNSYINHVYMETIRCLFRQMVKDGIKPDIFSLNSMIKGY 264

Query: 1077 ILSLHVNDALRMFHQMGVVYTCHPDSHSYNYLIHGLCCQGRTNNAKELYTEMVTKGFVPS 898
            +LSLHVNDALR+FHQMGV+Y C P++ +Y+ LIHGLC QGRTNNAKELY+EM TKGFVPS
Sbjct: 265  VLSLHVNDALRIFHQMGVIYDCPPNALTYDCLIHGLCAQGRTNNAKELYSEMKTKGFVPS 324

Query: 897  GKAYNSLANSLAICGEVEEAVRLLWEMNEKRRSADFITYRTVLDEICRQGKVEEAVRLLK 718
             K+YNSL NSLA+ GE+EEAV  LWEM +K+RSADFITY+TVLDEICR+G V+E  R L+
Sbjct: 325  SKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYKTVLDEICRRGTVQEGTRFLQ 384

Query: 717  EFLEKDLVDGLTYKKLLYVTEDELGDS 637
            E  EKDLVDG  Y+KLLYV ED+ G+S
Sbjct: 385  ELQEKDLVDGHAYRKLLYVLEDDYGNS 411