BLASTX nr result

ID: Cimicifuga21_contig00005498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005498
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306197.1| predicted protein [Populus trichocarpa] gi|2...    82   9e-14
emb|CBI37827.3| unnamed protein product [Vitis vinifera]               82   1e-13
ref|XP_002280561.1| PREDICTED: uncharacterized protein LOC100245...    82   1e-13
emb|CAN68296.1| hypothetical protein VITISV_033562 [Vitis vinifera]    82   1e-13
ref|XP_002521257.1| conserved hypothetical protein [Ricinus comm...    81   3e-13

>ref|XP_002306197.1| predicted protein [Populus trichocarpa] gi|222849161|gb|EEE86708.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 39/74 (52%), Positives = 49/74 (66%)
 Frame = +2

Query: 296 FWLTLSKEAIWGLRSLVVFLVEQPGQLKHIEWPSFQNXXXXXXXXXXXXXXXXXXXSSVD 475
           FWL+  KEAIW  ++L VFLVEQPGQLK+IEWP FQ+                   SSVD
Sbjct: 86  FWLSFIKEAIWAWKALFVFLVEQPGQLKYIEWPGFQSTLRTAMLTLVLVALLIVALSSVD 145

Query: 476 SILCYLLALMLRKS 517
           S+LCY+LAL+LR++
Sbjct: 146 SVLCYVLALLLRRT 159


>emb|CBI37827.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +2

Query: 230 KCSASMGMNRPESRF-NKSNSESFWLTLSKEAIWGLRSLVVFLVEQPGQLKHIEWPSFQN 406
           KC A  G NR E  F N S  E F L+  KEA W L+SL  FLV+QP QLK+IEWPSFQ+
Sbjct: 59  KCVAYAGRNRHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQS 118

Query: 407 XXXXXXXXXXXXXXXXXXXSSVDSILCYLLALMLRKS 517
                              SS+DS LC+LL + LR++
Sbjct: 119 TLKTAILTLVLVAALIVALSSIDSALCFLLTMFLRRT 155


>ref|XP_002280561.1| PREDICTED: uncharacterized protein LOC100245308 [Vitis vinifera]
          Length = 157

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +2

Query: 230 KCSASMGMNRPESRF-NKSNSESFWLTLSKEAIWGLRSLVVFLVEQPGQLKHIEWPSFQN 406
           KC A  G NR E  F N S  E F L+  KEA W L+SL  FLV+QP QLK+IEWPSFQ+
Sbjct: 60  KCVAYAGRNRHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQS 119

Query: 407 XXXXXXXXXXXXXXXXXXXSSVDSILCYLLALMLRKS 517
                              SS+DS LC+LL + LR++
Sbjct: 120 TLKTAILTLVLVAALIVALSSIDSALCFLLTMFLRRT 156


>emb|CAN68296.1| hypothetical protein VITISV_033562 [Vitis vinifera]
          Length = 519

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 45/97 (46%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +2

Query: 230 KCSASMGMNRPESRF-NKSNSESFWLTLSKEAIWGLRSLVVFLVEQPGQLKHIEWPSFQN 406
           KC A  G NR E  F N S  E F L+  KEA W L+SL  FLV+QP QLK+IEWPSFQ+
Sbjct: 422 KCVAYAGRNRHELSFANDSPKEPFLLSSIKEAFWALKSLFEFLVDQPSQLKYIEWPSFQS 481

Query: 407 XXXXXXXXXXXXXXXXXXXSSVDSILCYLLALMLRKS 517
                              SS+DS LC+LL + LR++
Sbjct: 482 TLKTAILTLVLVAALIVALSSIDSALCFLLTMFLRRT 518


>ref|XP_002521257.1| conserved hypothetical protein [Ricinus communis]
           gi|223539525|gb|EEF41113.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 58/152 (38%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
 Frame = +2

Query: 77  SFAGPIHLTCTHKSLIQFQTPKAFTRAGSNKLRFNPTNKYGSS---VGLPVSKVKCSASM 247
           SF+G +  TC  K L   Q         +N +R +  N  G        P S  K   S+
Sbjct: 11  SFSGLV--TCHPKHLFGIQRCNGIRFKITNTIRPSQKNTGGGIQYFTAKPSSNKKV-LSV 67

Query: 248 GMNRPESRF-NKSNSESFWLTLSKEAIWGLRSLVVFLVEQPGQLKHIEWPSFQNXXXXXX 424
           G +  +  + + S  E F L+  KEAIW ++SL +FLVEQP QLK+IEWPSF +      
Sbjct: 68  GRDYYQLSYKDDSPQEPFLLSFIKEAIWAMKSLFIFLVEQPSQLKYIEWPSFHSTLKTAI 127

Query: 425 XXXXXXXXXXXXXSSVDSILCYLLALMLRKSA 520
                        SSVDSILCYLLA +LR+ A
Sbjct: 128 LTLVIVALLIVALSSVDSILCYLLAWLLRRPA 159


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