BLASTX nr result

ID: Cimicifuga21_contig00005482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005482
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84094.1| unknown [Medicago truncatula] gi|388519345|gb|AFK...   137   4e-30
ref|XP_003619072.1| hypothetical protein MTR_6g036570 [Medicago ...   131   2e-28
gb|AAU90329.1| hypothetical protein SDM1_56t00007 [Solanum demis...   114   4e-23
ref|XP_002880700.1| hypothetical protein ARALYDRAFT_901227 [Arab...   111   2e-22
ref|NP_001237275.1| uncharacterized protein LOC100500388 [Glycin...   110   4e-22

>gb|ACJ84094.1| unknown [Medicago truncatula] gi|388519345|gb|AFK47734.1| unknown
           [Medicago truncatula]
          Length = 117

 Score =  137 bits (344), Expect = 4e-30
 Identities = 75/118 (63%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
 Frame = -1

Query: 640 MSDPYARAKVGRLMFKGGTLATVXXXXXXXXXXXXXXXXDHDPSLEEVQLSDE-SATQIE 464
           MSDPYAR K GRL FKGGTLAT                 + +P+LE+  L DE    +I 
Sbjct: 1   MSDPYARVKPGRLSFKGGTLATTSKTIDKKKKKKKNKNPNPNPNLEDETLIDEVEKEKIV 60

Query: 463 GGEASADIYTIDAARKMKYDDLFPVEAKKFGYDPKAKVTSVEQALDDRVKKKADRYCK 290
            GE S++ YTIDAA+KMKYD LFPVEAKKFGY+PKAKVTSVE ALDDRVKKKADRYCK
Sbjct: 61  DGEESSE-YTIDAAKKMKYDQLFPVEAKKFGYEPKAKVTSVEDALDDRVKKKADRYCK 117


>ref|XP_003619072.1| hypothetical protein MTR_6g036570 [Medicago truncatula]
           gi|355494087|gb|AES75290.1| hypothetical protein
           MTR_6g036570 [Medicago truncatula]
          Length = 151

 Score =  131 bits (330), Expect = 2e-28
 Identities = 73/116 (62%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
 Frame = -1

Query: 640 MSDPYARAKVGRLMFKGGTLATVXXXXXXXXXXXXXXXXDHDPSLEEVQLSDE-SATQIE 464
           MSDPYAR K GRL FKGGTLAT                 + +P+LE+  L DE    +I 
Sbjct: 1   MSDPYARVKPGRLSFKGGTLATTSKTIDKKKKKKKNKNPNPNPNLEDETLIDEVEKEKIV 60

Query: 463 GGEASADIYTIDAARKMKYDDLFPVEAKKFGYDPKAKVTSVEQALDDRVKKKADRY 296
            GE S++ YTIDAA+KMKYD LFPVEAKKFGY+PKAKVTSVE ALDDRVKKKADRY
Sbjct: 61  DGEESSE-YTIDAAKKMKYDQLFPVEAKKFGYEPKAKVTSVEDALDDRVKKKADRY 115


>gb|AAU90329.1| hypothetical protein SDM1_56t00007 [Solanum demissum]
          Length = 117

 Score =  114 bits (284), Expect = 4e-23
 Identities = 66/124 (53%), Positives = 77/124 (62%), Gaps = 7/124 (5%)
 Frame = -1

Query: 640 MSDPYARAKVGRLMFKGGTLATVXXXXXXXXXXXXXXXXDHDPSLEEVQLSDESAT---- 473
           MSDPY R   GRLMFKGG +A+                   + S E+V +SDE  T    
Sbjct: 1   MSDPYERVTGGRLMFKGGAVAS------RSKAIDKKKKKKKNKSAEDV-VSDEPLTGDAA 53

Query: 472 ---QIEGGEASADIYTIDAARKMKYDDLFPVEAKKFGYDPKAKVTSVEQALDDRVKKKAD 302
                +  +A  D++TIDAA++ KYDDLFPVEAKKFGYDP AK  SVE ALDDRVKKKAD
Sbjct: 54  LVATEQQADAPEDMFTIDAAKRRKYDDLFPVEAKKFGYDPNAKAKSVEDALDDRVKKKAD 113

Query: 301 RYCK 290
           RYCK
Sbjct: 114 RYCK 117


>ref|XP_002880700.1| hypothetical protein ARALYDRAFT_901227 [Arabidopsis lyrata subsp.
           lyrata] gi|297326539|gb|EFH56959.1| hypothetical protein
           ARALYDRAFT_901227 [Arabidopsis lyrata subsp. lyrata]
          Length = 114

 Score =  111 bits (277), Expect = 2e-22
 Identities = 61/117 (52%), Positives = 70/117 (59%)
 Frame = -1

Query: 640 MSDPYARAKVGRLMFKGGTLATVXXXXXXXXXXXXXXXXDHDPSLEEVQLSDESATQIEG 461
           MSDPY R   GRL FKGG LAT                   D    EV+++ + +     
Sbjct: 1   MSDPYERVNGGRLAFKGGDLATRKSIEKKNKKKLKKKKEKLDG---EVKMAPDGSASSAA 57

Query: 460 GEASADIYTIDAARKMKYDDLFPVEAKKFGYDPKAKVTSVEQALDDRVKKKADRYCK 290
                DIY+IDAA+K KYDDLFPVEAKKFGY PK+   S+E ALDDRVKKKADRYCK
Sbjct: 58  AVVDDDIYSIDAAKKKKYDDLFPVEAKKFGYIPKSNFESMEDALDDRVKKKADRYCK 114


>ref|NP_001237275.1| uncharacterized protein LOC100500388 [Glycine max]
           gi|255630206|gb|ACU15458.1| unknown [Glycine max]
          Length = 129

 Score =  110 bits (275), Expect = 4e-22
 Identities = 62/129 (48%), Positives = 71/129 (55%), Gaps = 12/129 (9%)
 Frame = -1

Query: 640 MSDPYARAKVGRLMFKGGTLAT------------VXXXXXXXXXXXXXXXXDHDPSLEEV 497
           MSDPY RAK GRL FKGG LA+                               +  LE+ 
Sbjct: 1   MSDPYERAKGGRLAFKGGILASRSKSIDKKGKKKKKNKGKDNDNNPNPNPNPEEQELEQE 60

Query: 496 QLSDESATQIEGGEASADIYTIDAARKMKYDDLFPVEAKKFGYDPKAKVTSVEQALDDRV 317
           Q  ++  T +   E     YTIDAA++MKY+ LFPVEAKKFGY PK    SVE ALDDRV
Sbjct: 61  QKQEQEETPLLEDEGEGSEYTIDAAKRMKYEQLFPVEAKKFGYQPKTNFKSVEDALDDRV 120

Query: 316 KKKADRYCK 290
           KKKADRYCK
Sbjct: 121 KKKADRYCK 129


Top