BLASTX nr result

ID: Cimicifuga21_contig00005473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005473
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246...   149   2e-67
gb|AFK44143.1| unknown [Lotus japonicus]                              142   5e-67
ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana] ...   145   5e-67
ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arab...   144   7e-67
gb|ADP88925.1| classical AGP [Gunnera manicata]                       147   2e-66

>ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246511 [Vitis vinifera]
           gi|296085576|emb|CBI29308.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  149 bits (377), Expect(2) = 2e-67
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = +2

Query: 128 MAVNPQLFSNGMPVPFENEMFVLARDGVEFEIDKVPGTHGGHVKAKGTIYLSNIRMVFVA 307
           MA+NPQLF NGMPVPF NE+ VLARDGVEFE+DK+PG HGG+ KAKGTIYLSNIRMVFVA
Sbjct: 1   MALNPQLFPNGMPVPFMNEISVLARDGVEFEVDKIPGAHGGNFKAKGTIYLSNIRMVFVA 60

Query: 308 NKPVGNLTAFDMPLLYVRAEKFN 376
           NKPVGN+TAFDMPLLYV  EKFN
Sbjct: 61  NKPVGNITAFDMPLLYVHGEKFN 83



 Score =  132 bits (333), Expect(2) = 2e-67
 Identities = 63/79 (79%), Positives = 69/79 (87%)
 Frame = +3

Query: 477 VVPEGQHRALYSTHSLKILFKEGGCGTFVPLFLNLIASVRQYSQHSEAEAASRVDPLQAA 656
           VVPE QHRALYSTHS KILFKEGGCGTFVPLF NLI SVR+Y++ + +    +VDPLQAA
Sbjct: 99  VVPENQHRALYSTHSFKILFKEGGCGTFVPLFFNLITSVRRYNELAGSGPELQVDPLQAA 158

Query: 657 QTPVDEMMRHAYVDPNDPT 713
           QTPVDEMMRHAYVDPNDPT
Sbjct: 159 QTPVDEMMRHAYVDPNDPT 177


>gb|AFK44143.1| unknown [Lotus japonicus]
          Length = 208

 Score =  142 bits (359), Expect(2) = 5e-67
 Identities = 69/85 (81%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
 Frame = +2

Query: 128 MAVNPQLFSNGMPVPFENEMFVLARDGVEFEIDKVPGT--HGGHVKAKGTIYLSNIRMVF 301
           MA+NPQLF NGMPVPF NEMFVLARDGVEFEIDK+PG+  HGGH+K KGTIYLSNIRMVF
Sbjct: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEIDKIPGSGNHGGHLKTKGTIYLSNIRMVF 60

Query: 302 VANKPVGNLTAFDMPLLYVRAEKFN 376
           VA  P G LTAFDMPLLY   EKFN
Sbjct: 61  VAKSPAGGLTAFDMPLLYTSGEKFN 85



 Score =  138 bits (347), Expect(2) = 5e-67
 Identities = 66/81 (81%), Positives = 73/81 (90%), Gaps = 2/81 (2%)
 Frame = +3

Query: 477 VVPEGQHRALYSTHSLKILFKEGGCGTFVPLFLNLIASVRQYSQHSEAEA--ASRVDPLQ 650
           VVP+ QHRALYSTH+ KILFKEGGCGTF+PLF NLIASVRQY+Q + A+A   +RVDPLQ
Sbjct: 101 VVPDDQHRALYSTHTFKILFKEGGCGTFIPLFFNLIASVRQYNQRANAQAQTQARVDPLQ 160

Query: 651 AAQTPVDEMMRHAYVDPNDPT 713
           AAQTPVDEMMRHAYVDPNDPT
Sbjct: 161 AAQTPVDEMMRHAYVDPNDPT 181


>ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573382|emb|CAB87686.1| putative protein [Arabidopsis
           thaliana] gi|17065570|gb|AAL32939.1| putative protein
           [Arabidopsis thaliana] gi|17380652|gb|AAL36156.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148563|gb|AAM10172.1| putative protein [Arabidopsis
           thaliana] gi|21436275|gb|AAM51276.1| unknown protein
           [Arabidopsis thaliana] gi|21593584|gb|AAM65551.1|
           unknown [Arabidopsis thaliana]
           gi|332004326|gb|AED91709.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 207

 Score =  145 bits (365), Expect(2) = 5e-67
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = +2

Query: 128 MAVNPQLFSNGMPVPFENEMFVLARDGVEFEIDKVPGTHGGHVKAKGTIYLSNIRMVFVA 307
           MA+NPQL  NGMPVPF NEMFVL RDGVEFE+DK+PG HGGHVKAKG IYLSNIRMVFV+
Sbjct: 1   MALNPQLLPNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFVS 60

Query: 308 NKPVGNLTAFDMPLLYVRAEKFN 376
           +KPV N  AFDMPLLY+ AEKFN
Sbjct: 61  SKPVDNFVAFDMPLLYIHAEKFN 83



 Score =  135 bits (341), Expect(2) = 5e-67
 Identities = 67/84 (79%), Positives = 72/84 (85%), Gaps = 5/84 (5%)
 Frame = +3

Query: 477 VVPEGQHRALYSTHSLKILFKEGGCGTFVPLFLNLIASVRQYSQHSE-----AEAASRVD 641
           VVPE +HRALYSTHS KILFKEGGCGTFVPLFLNLI+SVRQY++  +     A AA  VD
Sbjct: 99  VVPENEHRALYSTHSFKILFKEGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVD 158

Query: 642 PLQAAQTPVDEMMRHAYVDPNDPT 713
           PLQAAQTPVDEMMRHAYVDPNDPT
Sbjct: 159 PLQAAQTPVDEMMRHAYVDPNDPT 182


>ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arabidopsis lyrata subsp.
           lyrata] gi|297317324|gb|EFH47746.1| hypothetical protein
           ARALYDRAFT_909134 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  144 bits (363), Expect(2) = 7e-67
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = +2

Query: 128 MAVNPQLFSNGMPVPFENEMFVLARDGVEFEIDKVPGTHGGHVKAKGTIYLSNIRMVFVA 307
           MA+NPQL  NG+P+PF NEMFVL RDGVEFE+DK+PG HGGHVKAKG IYLSNIRMVFVA
Sbjct: 1   MALNPQLLPNGIPIPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFVA 60

Query: 308 NKPVGNLTAFDMPLLYVRAEKFN 376
           +KPV N  AFDMPLLY+ AEKFN
Sbjct: 61  SKPVDNFVAFDMPLLYIHAEKFN 83



 Score =  136 bits (342), Expect(2) = 7e-67
 Identities = 67/84 (79%), Positives = 73/84 (86%), Gaps = 5/84 (5%)
 Frame = +3

Query: 477 VVPEGQHRALYSTHSLKILFKEGGCGTFVPLFLNLIASVRQYSQHSE-----AEAASRVD 641
           VVPE +HRALYSTHS KILFKEGGCGTFVPLFLNLI+SVRQY++  +     A AA RVD
Sbjct: 99  VVPENEHRALYSTHSFKILFKEGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPRVD 158

Query: 642 PLQAAQTPVDEMMRHAYVDPNDPT 713
           PLQAAQTPV+EMMRHAYVDPNDPT
Sbjct: 159 PLQAAQTPVEEMMRHAYVDPNDPT 182


>gb|ADP88925.1| classical AGP [Gunnera manicata]
          Length = 201

 Score =  147 bits (370), Expect(2) = 2e-66
 Identities = 70/83 (84%), Positives = 75/83 (90%)
 Frame = +2

Query: 128 MAVNPQLFSNGMPVPFENEMFVLARDGVEFEIDKVPGTHGGHVKAKGTIYLSNIRMVFVA 307
           MA+NPQLF NGMPVPF NE+ VLARDGVEFE+DK+PG+ GG VKAKGTIYLSNIRMVFVA
Sbjct: 1   MALNPQLFPNGMPVPFTNEVSVLARDGVEFEVDKIPGSQGGSVKAKGTIYLSNIRMVFVA 60

Query: 308 NKPVGNLTAFDMPLLYVRAEKFN 376
           NKP GN TAFDMPLLYVR EKFN
Sbjct: 61  NKPHGNFTAFDMPLLYVRGEKFN 83



 Score =  132 bits (331), Expect(2) = 2e-66
 Identities = 66/79 (83%), Positives = 67/79 (84%)
 Frame = +3

Query: 477 VVPEGQHRALYSTHSLKILFKEGGCGTFVPLFLNLIASVRQYSQHSEAEAASRVDPLQAA 656
           VVPE QHRALYSTHS KILFKEGGCGTFVPLF NLI SVRQY+Q S       VDPLQAA
Sbjct: 99  VVPENQHRALYSTHSFKILFKEGGCGTFVPLFFNLITSVRQYNQLS--VPVVNVDPLQAA 156

Query: 657 QTPVDEMMRHAYVDPNDPT 713
           QTPVDEMMRHAYVDPNDPT
Sbjct: 157 QTPVDEMMRHAYVDPNDPT 175


Top