BLASTX nr result

ID: Cimicifuga21_contig00005444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005444
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis...   249   1e-63
ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arab...   248   2e-63
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   247   4e-63
ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|1...   247   5e-63
ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycin...   246   1e-62

>ref|NP_181525.2| signal peptidase complex subunit 2 [Arabidopsis thaliana]
           gi|20140011|sp|P58684.1|SPCS2_ARATH RecName:
           Full=Probable signal peptidase complex subunit 2;
           AltName: Full=Microsomal signal peptidase 25 kDa
           subunit; Short=SPase 25 kDa subunit
           gi|17528956|gb|AAL38688.1| unknown protein [Arabidopsis
           thaliana] gi|20465965|gb|AAM20168.1| unknown protein
           [Arabidopsis thaliana] gi|330254662|gb|AEC09756.1|
           signal peptidase complex subunit 2 [Arabidopsis
           thaliana]
          Length = 192

 Score =  249 bits (636), Expect = 1e-63
 Identities = 122/174 (70%), Positives = 141/174 (81%)
 Frame = +3

Query: 258 LLDPNSIKHLLDESVTEIVTSRGYKEDVRLSNVKLLLGSITIAIALIAQFYWKKFPENKN 437
           LLD +SIKH+LDESV++IVTSRGYKEDVRLSN+KL+LG+I I +AL+AQFY KKFPEN++
Sbjct: 18  LLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQFYNKKFPENRD 77

Query: 438 FLIGCIVLYIFFNGLLQLIIYTKEKTAILFTHPPEGSFTSTGLVISSSLPKFSDMYTLXX 617
           FLIGCI LY+  N +LQLI+YTKEK AILFT+PPEGSFTSTGLV+SS LP+FSD YTL  
Sbjct: 78  FLIGCIALYVVLNAVLQLILYTKEKNAILFTYPPEGSFTSTGLVVSSKLPRFSDQYTLTI 137

Query: 618 XXXXXXXXXAGKPVQFTKSVTKWFTKDGILAEGLFWKDVSGLINEYAGEYSKNK 779
                    AGK VQ TKSVT+WFTKDG+L EGLFWKDV  LI  YA E  K K
Sbjct: 138 DSADPKSISAGKSVQLTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEEEPKKK 191


>ref|XP_002881686.1| hypothetical protein ARALYDRAFT_483034 [Arabidopsis lyrata subsp.
           lyrata] gi|297327525|gb|EFH57945.1| hypothetical protein
           ARALYDRAFT_483034 [Arabidopsis lyrata subsp. lyrata]
          Length = 192

 Score =  248 bits (633), Expect = 2e-63
 Identities = 121/174 (69%), Positives = 141/174 (81%)
 Frame = +3

Query: 258 LLDPNSIKHLLDESVTEIVTSRGYKEDVRLSNVKLLLGSITIAIALIAQFYWKKFPENKN 437
           LLD +SIKH+LDESV++IVTSRGYKEDVRLSN+KL+LG+I I +AL+AQFY KKFPEN++
Sbjct: 18  LLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQFYNKKFPENRD 77

Query: 438 FLIGCIVLYIFFNGLLQLIIYTKEKTAILFTHPPEGSFTSTGLVISSSLPKFSDMYTLXX 617
           FLIGCI LY+  N +LQLI+YTKEK AILFT+PPEGSFTSTGLV+SS LP+FSD YTL  
Sbjct: 78  FLIGCIALYVVLNAVLQLILYTKEKNAILFTYPPEGSFTSTGLVVSSKLPRFSDQYTLTI 137

Query: 618 XXXXXXXXXAGKPVQFTKSVTKWFTKDGILAEGLFWKDVSGLINEYAGEYSKNK 779
                    AGK V+ TKSVT+WFTKDG+L EGLFWKDV  LI  YA E  K K
Sbjct: 138 DSADPKSISAGKSVELTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEEEPKKK 191


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  247 bits (631), Expect = 4e-63
 Identities = 127/179 (70%), Positives = 143/179 (79%), Gaps = 5/179 (2%)
 Frame = +3

Query: 258 LLDPNSIKHLLDESVTEIVTSRGYKEDVRLSNVKLLLGSITIAIALIAQFYWKKFPENKN 437
           LLD +SIKH+LDE V+EIVTSRGY EDVR+SNV+LL+GSI I IAL+AQFY KKFPEN++
Sbjct: 17  LLDHHSIKHILDEYVSEIVTSRGYVEDVRMSNVRLLMGSIIIIIALVAQFYPKKFPENRD 76

Query: 438 FLIGCIVLY-----IFFNGLLQLIIYTKEKTAILFTHPPEGSFTSTGLVISSSLPKFSDM 602
           FLI CI+LY     I FNGLLQLIIYTKEK AILFTHPPEG F STGLV+SS LP+FSD+
Sbjct: 77  FLIVCILLYPFCCYILFNGLLQLIIYTKEKNAILFTHPPEGFFNSTGLVVSSKLPRFSDL 136

Query: 603 YTLXXXXXXXXXXXAGKPVQFTKSVTKWFTKDGILAEGLFWKDVSGLINEYAGEYSKNK 779
           YTL           A  PV+FTKSVT+WFT DGIL EGLFWKDV GLIN+YA E  KNK
Sbjct: 137 YTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLFWKDVEGLINDYAREPKKNK 195


>ref|XP_002315176.1| predicted protein [Populus trichocarpa] gi|118489054|gb|ABK96334.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222864216|gb|EEF01347.1| predicted protein [Populus
           trichocarpa]
          Length = 191

 Score =  247 bits (630), Expect = 5e-63
 Identities = 123/174 (70%), Positives = 142/174 (81%)
 Frame = +3

Query: 258 LLDPNSIKHLLDESVTEIVTSRGYKEDVRLSNVKLLLGSITIAIALIAQFYWKKFPENKN 437
           LLD +SIKH+LDESV+EIVTSRGY+EDVR+SN++L  G+I I IAL AQFY KKFP+N+ 
Sbjct: 18  LLDHHSIKHILDESVSEIVTSRGYEEDVRMSNIRLFFGTIIIVIALFAQFYNKKFPQNRE 77

Query: 438 FLIGCIVLYIFFNGLLQLIIYTKEKTAILFTHPPEGSFTSTGLVISSSLPKFSDMYTLXX 617
           FLIGCIVLYI FNGLLQLII+ KEK AIL T+PP+GSFTSTGLV+SS LP+FSD YTL  
Sbjct: 78  FLIGCIVLYIVFNGLLQLIIHLKEKNAILVTYPPKGSFTSTGLVVSSKLPRFSDEYTLTI 137

Query: 618 XXXXXXXXXAGKPVQFTKSVTKWFTKDGILAEGLFWKDVSGLINEYAGEYSKNK 779
                    AGKPVQFTKSVT+ FTKDG+L EGLFWKDV  LIN+YA E  K+K
Sbjct: 138 ASADPKSISAGKPVQFTKSVTQCFTKDGVLVEGLFWKDVEALINDYAAEPKKSK 191


>ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycine max]
           gi|255626189|gb|ACU13439.1| unknown [Glycine max]
          Length = 184

 Score =  246 bits (627), Expect = 1e-62
 Identities = 122/174 (70%), Positives = 138/174 (79%)
 Frame = +3

Query: 258 LLDPNSIKHLLDESVTEIVTSRGYKEDVRLSNVKLLLGSITIAIALIAQFYWKKFPENKN 437
           LLD +SIKH+LDESV+E+VTSRGY EDVRLSN +L +G+I I IAL AQFY KKFPEN++
Sbjct: 11  LLDHHSIKHILDESVSEVVTSRGYVEDVRLSNARLFIGAIIIVIALFAQFYKKKFPENRD 70

Query: 438 FLIGCIVLYIFFNGLLQLIIYTKEKTAILFTHPPEGSFTSTGLVISSSLPKFSDMYTLXX 617
           FLI CI LY+ FNGLLQLIIYTKEK AILFT+PP GSFTSTGLV+SS LP+FSDMYTL  
Sbjct: 71  FLIACIALYVIFNGLLQLIIYTKEKNAILFTYPPVGSFTSTGLVVSSKLPRFSDMYTLTI 130

Query: 618 XXXXXXXXXAGKPVQFTKSVTKWFTKDGILAEGLFWKDVSGLINEYAGEYSKNK 779
                    A +PV FTKSVT+WFTKDGIL EGLFWKDV  LI +Y  E  K K
Sbjct: 131 ASADPKSISANEPVHFTKSVTQWFTKDGILVEGLFWKDVEALIVQYTKEPKKGK 184


Top