BLASTX nr result

ID: Cimicifuga21_contig00005436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005436
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...   207   5e-52
emb|CBI30210.3| unnamed protein product [Vitis vinifera]              207   5e-52
ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi...   184   6e-45
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43

>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score =  211 bits (537), Expect = 5e-53
 Identities = 94/142 (66%), Positives = 121/142 (85%)
 Frame = -3

Query: 431  KALAVWSEMERMGVEPDSHTFVLILSAHRHTNLNLLDNCRDLFKSMASIYNIEPTSEHYA 252
            +ALA+WS ME+ G++PD+ TFVLI+SA++ T+ NLLD CR LF SM  I+++EPTSEHYA
Sbjct: 625  EALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYA 684

Query: 251  SMVGVLGYWGYYDEAEEVIDNMPFEPDDSVWRVLLDSCRLRSETKLGKKVAEHIVAMEPQ 72
            S+VGVLGYWG  +EAEE+I+ MPF+P+ SVWR LLD CRL + T +GK+VA+HI+ MEP+
Sbjct: 685  SLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPR 744

Query: 71   DPSTYILVSNLYAASGRWNCFE 6
            DPSTY+LVSNLYAASGRW+C E
Sbjct: 745  DPSTYVLVSNLYAASGRWHCSE 766


>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Vitis vinifera]
          Length = 882

 Score =  207 bits (528), Expect = 5e-52
 Identities = 92/140 (65%), Positives = 120/140 (85%)
 Frame = -3

Query: 431  KALAVWSEMERMGVEPDSHTFVLILSAHRHTNLNLLDNCRDLFKSMASIYNIEPTSEHYA 252
            +AL+VWS+ME+ G++PD+ TFVLI+SA+RHTN NL+DNCR LF SM +IY+I+PT EHY 
Sbjct: 592  EALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYT 651

Query: 251  SMVGVLGYWGYYDEAEEVIDNMPFEPDDSVWRVLLDSCRLRSETKLGKKVAEHIVAMEPQ 72
            S+VGVLGYWG  +EAEE+I+ MP EP+ SVWR LLD+CR+ S T +GK+ A+H++AM+P 
Sbjct: 652  SLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPL 711

Query: 71   DPSTYILVSNLYAASGRWNC 12
            DPSTYILVSNLY+A GRW+C
Sbjct: 712  DPSTYILVSNLYSAYGRWHC 731


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  207 bits (528), Expect = 5e-52
 Identities = 92/140 (65%), Positives = 120/140 (85%)
 Frame = -3

Query: 431  KALAVWSEMERMGVEPDSHTFVLILSAHRHTNLNLLDNCRDLFKSMASIYNIEPTSEHYA 252
            +AL+VWS+ME+ G++PD+ TFVLI+SA+RHTN NL+DNCR LF SM +IY+I+PT EHY 
Sbjct: 610  EALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYT 669

Query: 251  SMVGVLGYWGYYDEAEEVIDNMPFEPDDSVWRVLLDSCRLRSETKLGKKVAEHIVAMEPQ 72
            S+VGVLGYWG  +EAEE+I+ MP EP+ SVWR LLD+CR+ S T +GK+ A+H++AM+P 
Sbjct: 670  SLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPL 729

Query: 71   DPSTYILVSNLYAASGRWNC 12
            DPSTYILVSNLY+A GRW+C
Sbjct: 730  DPSTYILVSNLYSAYGRWHC 749


>ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Glycine max]
          Length = 874

 Score =  184 bits (467), Expect = 6e-45
 Identities = 84/139 (60%), Positives = 109/139 (78%)
 Frame = -3

Query: 431  KALAVWSEMERMGVEPDSHTFVLILSAHRHTNLNLLDNCRDLFKSMASIYNIEPTSEHYA 252
            +AL +W EM   G++P+  TFVLI+SA+R TNLNL+D+CR+LF SM ++Y IEPTS HYA
Sbjct: 584  RALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYA 643

Query: 251  SMVGVLGYWGYYDEAEEVIDNMPFEPDDSVWRVLLDSCRLRSETKLGKKVAEHIVAMEPQ 72
            S + VLG+WG   EA E I+NMPF+P   VWRVLLD CRL     +GK  A++I+A+EP+
Sbjct: 644  SFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPK 703

Query: 71   DPSTYILVSNLYAASGRWN 15
            DPST+ILVSNLY+ASGRW+
Sbjct: 704  DPSTFILVSNLYSASGRWD 722


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g03800-like
            [Cucumis sativus]
          Length = 908

 Score =  178 bits (452), Expect = 4e-43
 Identities = 82/143 (57%), Positives = 108/143 (75%)
 Frame = -3

Query: 431  KALAVWSEMERMGVEPDSHTFVLILSAHRHTNLNLLDNCRDLFKSMASIYNIEPTSEHYA 252
            KAL +W +ME+ G++PDS TF LI+SA++HT LNL+D+CR LF SM + +NI+PT EHYA
Sbjct: 618  KALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYA 677

Query: 251  SMVGVLGYWGYYDEAEEVIDNMPFEPDDSVWRVLLDSCRLRSETKLGKKVAEHIVAMEPQ 72
            S + VLG WG  +EAE+ I NMP EPD  VWR LL+SCR+    +L K  A +I+A+EP+
Sbjct: 678  SFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPK 737

Query: 71   DPSTYILVSNLYAASGRWNCFER 3
            DP +YIL SNLY+ASGRW   E+
Sbjct: 738  DPLSYILKSNLYSASGRWYYSEK 760


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