BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005406
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   108   5e-22
ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|35550...    99   5e-19
ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...    94   2e-17
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    93   3e-17
ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    90   2e-16

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/178 (36%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
 Frame = +3

Query: 51  YGFGFHQGSNEYKLIR---FVCESYSGLPSHVSVYSPDSDPLWRTLEDISYNTRLMHYTA 221
           YGFG+   +++YKL+    FV        SHV +Y+  +D +W+TL  + Y         
Sbjct: 143 YGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTD-VWKTLPSMPYALCCARTMG 201

Query: 222 PLVNGALHWLMFKTGLPASR-VIVSFDLKDEVFQEILHPNDVNTEVRSNQVLSKIGELSG 398
             V+GALHW++ +   P SR +IV+FDL+ EVF+E+  P  V+ +   +  L     L G
Sbjct: 202 VFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMDVAL-----LRG 256

Query: 399 LLCIFCMEPEKDVQIWVMKEYGVVESWKKQFKIGRPEISGPFKYLQPLGVSNNGEIVV 572
           +LCI          +WVM+EYG  +SW K F +G+P      K L+PLG S NG+ V+
Sbjct: 257 MLCIIENRGSDGFDVWVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVL 314


>ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|355503434|gb|AES84637.1|
           F-box protein [Medicago truncatula]
          Length = 380

 Score = 99.0 bits (245), Expect = 5e-19
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
 Frame = +3

Query: 51  YGFGFHQGSNEYKLIRFVC---ESYSGLPSHVSVYSPDSDPLWRTLEDISYNTRLMHYTA 221
           +GFGF   + +YKL+R  C     YS   SHV ++S   +  W+ L  + Y         
Sbjct: 140 HGFGFDPLNVDYKLLRISCIVDPQYSTSDSHVRLFSSKMNS-WKDLPSMPYALSYPRTEG 198

Query: 222 PLVNGALHWLMF-KTGLPASRVIVSFDLKDEVFQEILHPNDVNTEVRSNQVLSKIGELSG 398
             V  +LHW+M  K G   SRVIV+F+L  E+F E+  P ++  EV S      +  L G
Sbjct: 199 VFVENSLHWIMTRKLGQLQSRVIVAFNLTHEIFNEVPFP-EIGEEVNSESFEIGVAVLEG 257

Query: 399 LLCIFCMEPEKDVQIWVMKEYGVVESWKKQFKIGRPEISGPFKYLQPLGVSNNGEIVV 572
            LC+        + +WVMKEYG  +SW + F +       P K L PL  S++G +V+
Sbjct: 258 CLCMIVNYQTVKIDVWVMKEYGCRDSWCELFTLAESCFILPLKTLWPLAYSSDGSMVL 315


>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1|
           F-box protein [Medicago truncatula]
          Length = 383

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 5/179 (2%)
 Frame = +3

Query: 51  YGFGFHQGSNEYKLIRFVC---ESYSGLPSHVSVYSPDSDPLWRTLEDISYNTRLMHYT- 218
           +GFGF   +N+YKLIR  C     +S   SHV ++S  ++  W+ L  + Y       T 
Sbjct: 142 HGFGFDPLTNDYKLIRISCFVGVQHSTFESHVRLFSFKTNS-WKELPTMPYTLSYARRTM 200

Query: 219 APLVNGALHWLMF-KTGLPASRVIVSFDLKDEVFQEILHPNDVNTEVRSNQVLSKIGELS 395
              V  +LHW+M  K  L   R IV+F+L  E+F E+  P ++  +V S      I  L 
Sbjct: 201 GDFVENSLHWVMTRKLDLLQPRAIVAFNLTLEIFNEVPFP-EIGEDVNSESFQIGISVLE 259

Query: 396 GLLCIFCMEPEKDVQIWVMKEYGVVESWKKQFKIGRPEISGPFKYLQPLGVSNNGEIVV 572
           G LC+        + +WVMKEYG  +SW K F +     S P + L+ LG S++  +V+
Sbjct: 260 GCLCMIVNYQTAKIDVWVMKEYGCRDSWCKLFTLAESCFSLPLRALRILGYSSDRSMVL 318


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 60/180 (33%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
 Frame = +3

Query: 51  YGFGFHQGSNEYKLIRFVCESYSG---LPSHVSVYSPDSDPLWRTLEDISYNTRLMHYTA 221
           +GFG+    ++YKL+R       G     S V VYS      WR + D+ Y         
Sbjct: 149 FGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQS-WRRIGDMPYCVHYPGANG 207

Query: 222 PLVNGALHWLMFKTGLPASRV---IVSFDLKDEVFQEILHPNDVNTEVRSNQVLSKIGEL 392
              NGALHW++ +   P S V   +V+ DL  E ++E+L P     E +       +G L
Sbjct: 208 VFANGALHWVVGEN--PESNVANIVVALDLGVEDYREVLQP-----EYKDKNFYIDLGVL 260

Query: 393 SGLLCIFCMEPEKDVQIWVMKEYGVVESWKKQFKIGRPEISGPFKYLQPLGVSNNGEIVV 572
            G LC       + V +W+MKEYGV ESW K F + + E+ G  + L+PL  S +G+ V+
Sbjct: 261 RGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVL 320


>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
 Frame = +3

Query: 51  YGFGFHQGSNEYKLIRFVCESYSGLPSHV-SVYSPDSDPL----------WRTLEDISYN 197
           +GFGF Q S +YKL+R          SH+  + +P  DP           W+ +  + Y+
Sbjct: 164 HGFGFDQISGDYKLLRI---------SHLLDLQNPFYDPQVRLFSLKTNSWKIIPAMPYD 214

Query: 198 TRLMHYTAPLVNGALHWLMFKT--GLPASRVIVSFDLKDEVFQEILHPNDVNTEVRSNQV 371
            + ++     V  ++HW+M K   GL  S +IV+F+L  E+F E+  P+++  EV     
Sbjct: 215 LQHLYDLGVFVENSIHWIMTKKLDGLHPS-LIVAFNLTLEIFNEVPLPDEIGEEVNGESF 273

Query: 372 LSKIGELSGLLCIFCMEPEKDVQIWVMKEYGVVESWKKQFKIGRPEISGPFKYLQPLGVS 551
              +  L G LCI     +  + +WVMKEYG  +SW K F +       P K L+P+  S
Sbjct: 274 EVHVAVLGGCLCITVDYKDTKIDVWVMKEYGCRDSWCKLFTMAESCFDLPLKLLRPICYS 333

Query: 552 NNGEIVV 572
           ++G  V+
Sbjct: 334 SDGSKVL 340