BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005405
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   101   2e-19
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...    94   3e-17
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    93   5e-17
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    91   3e-16
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    90   5e-16

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  101 bits (251), Expect = 2e-19
 Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 13/236 (5%)
 Frame = +1

Query: 37  YAAELAACDEAIDLELPFDRVTLGKNAYIVYGICNGLVCLTDYSKNLYLWNPLTKDYIDI 216
           Y  +L + D   +L+ P   +    N   V G CNGL+C+ + + ++  WNP  + +  I
Sbjct: 62  YELDLNSMDRVKELDHP---LMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRII 118

Query: 217 STPSLY----------PICEPXXXXXXXXXXSTDDYMLIRFVCEFDYAQPDYLSHVSVYA 366
            +  L                          +TDDY L+      D     + SHV +Y 
Sbjct: 119 PSEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYT 178

Query: 367 PDADSSWRTLEDISYNTCLMEFTGQPVNGALHWLVFKNYRPSSR-VIVSFDMKDEVFQEI 543
              D  W+TL  + Y  C     G  V+GALHW+V ++  P SR +IV+FD++ EVF+E+
Sbjct: 179 MRTDV-WKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREV 237

Query: 544 PKPNDVN--FDVNFHNQDPVAIGELGGLLCVFCFQLEVDVKIWVMEEYGVVESWKK 705
             P  V+  FD++        +  L G+LC+   +      +WVM EYG  +SW K
Sbjct: 238 ALPGTVDGKFDMD--------VALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCK 285


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 10/237 (4%)
 Frame = +1

Query: 25  SKFYYAAELAACDEAIDLELPFDRVTLGKNAYI-VYGICNGLVCLTDYSKNLYLWNP-LT 198
           S FY   + +    A+ L  PF     G N +I + G CNGL+CL    + +  WNP + 
Sbjct: 59  SDFYQINDFSNLTTAVKLNPPFK----GSNNFISLVGSCNGLLCLFSDGE-IAFWNPTIC 113

Query: 199 KDYIDISTPSLYP-------ICEPXXXXXXXXXXSTDDYMLIRFVCEFDYAQPDYLSHVS 357
           K  I  S P   P       I              TDDY L+   C  +  Q    SH  
Sbjct: 114 KHRIIPSLPIPTPQHSEPNNIYADFCVYGFGFDPLTDDYKLLTIFCFVEIQQSTSESHAR 173

Query: 358 VYAPDADSSWRTLEDISYNTCLMEFTGQPVNGALHWLVFKNYRP-SSRVIVSFDMKDEVF 534
           +++   +S W+ L  + Y     +  G  V  +LHW++ +   P   RVIV+F++  E+F
Sbjct: 174 LFSSKTNS-WKELPTMPYTLYYAQTMGVFVENSLHWIMTEKLDPLKPRVIVAFNLTHEIF 232

Query: 535 QEIPKPNDVNFDVNFHNQDPVAIGELGGLLCVFCFQLEVDVKIWVMEEYGVVESWKK 705
            E+P P ++  +VN  + + + +  L G LC+      V + +W+M+EYG  +SW K
Sbjct: 233 NEVPFP-EIGEEVNSESFE-IGVAVLEGCLCMTVNYQTVKIDVWLMKEYGCRDSWCK 287


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
 Frame = +1

Query: 124 VYGICNGLVCLTDYSKNLYLWNPLTK-----DYIDISTPSLYPICE-PXXXXXXXXXXST 285
           + G CNGL+C+ +   ++ LWNP  +      Y+ +     + +C             S 
Sbjct: 91  ILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSN 150

Query: 286 DDYMLIRFVCEFDYAQPDYLSHVSVYAPDADSSWRTLEDISYNTCLMEFTGQPVNGALHW 465
           DDY L+R        +  + S V V++    +SWR + D+ Y        G   NGALHW
Sbjct: 151 DDYKLVRIAQFGGVDRKSFESEVKVFSL-RKNSWRRIADMPYCVLYPGENGIYANGALHW 209

Query: 466 LVFKNYRPSSRV---IVSFDMKDEVFQEIPKPNDVNFDVNFHNQDPVAIGELGGLLCVFC 636
           LV ++  P S V   IV+ D+  E +  +PKP  V+ + N      + +G L G L +  
Sbjct: 210 LVSQD--PDSTVADTIVALDLGVEDYHVVPKPEFVDMNCN------MGVGVLQGCLSLLA 261

Query: 637 FQLEVDVKIWVMEEYGVVESWKK 705
           +     V +WVMEEY V ESW K
Sbjct: 262 YARSERVDVWVMEEYMVKESWSK 284


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 8/206 (3%)
 Frame = +1

Query: 112 NAYIVYGICNGLVCLTDYSKNLYLWNP-------LTKDYIDISTPSLYPICEPXXXXXXX 270
           N+  V G  NGL+C+++ + ++ LWNP       L  D       SL+            
Sbjct: 85  NSIKVLGSSNGLLCISNVADDIALWNPFLRKHRILPADRFHRPQSSLFAA----RVYGFG 140

Query: 271 XXXSTDDYMLIRFVCEFDYAQPDYLSHVSVYAPDADSSWRTLEDISYNTCLMEFTGQPVN 450
               ++DY L+      D  +  + S V +Y   +DS W+ L  + Y  C     G  V+
Sbjct: 141 HHSPSNDYKLLSITYFVDLQKRTFDSQVQLYTLKSDS-WKNLPSMPYALCCARTMGVFVS 199

Query: 451 GALHWLVFKNYRP-SSRVIVSFDMKDEVFQEIPKPNDVNFDVNFHNQDPVAIGELGGLLC 627
           G+LHWLV +  +P    +IVSFD+  E F E+P P  VN D +      + +  LGG LC
Sbjct: 200 GSLHWLVTRKLQPHEPDLIVSFDLTRETFHEVPLPVTVNGDFD------MQVALLGGCLC 253

Query: 628 VFCFQLEVDVKIWVMEEYGVVESWKK 705
           V   +      +WVM  YG   SW+K
Sbjct: 254 VVEHR-GTGFDVWVMRVYGSRNSWEK 278


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328297|gb|EFH58716.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
 Frame = +1

Query: 109 KNAYIVYGICNGLVCLTDYSKNLYLWNPLTKDY----IDISTPSLYPICEPXXXXXXXXX 276
           +N   + G  NGLVC++     + L+NP T D       +   S+    +          
Sbjct: 160 RNWVEIVGSSNGLVCISPGEGAVILYNPTTGDSKRLPETLRPKSVEYGRDNFQTYGFGFD 219

Query: 277 XSTDDYMLIRFVCEFDYAQPDYLSHVSVYAPDADSSWRTLEDISYNTCLMEFT-GQPVNG 453
             TDDY +++ V     A  D +   SVY+  AD SWR + +++Y      +T G   NG
Sbjct: 220 DLTDDYKVVKLV-----ATSDDILDASVYSLKAD-SWRRICNLNYEHNDGFYTSGVHFNG 273

Query: 454 ALHWLVFKNYRPSSRVIVSFDMKDEVFQEIPKPNDVNFDVNFHNQDPVAIGELGGLLCVF 633
           A+HW VF       RV+V+FD++ E F+E+P P  V  +   H      +G L G LCV 
Sbjct: 274 AIHW-VFAEISHGQRVVVAFDIQTEEFREMPLP--VEAEDCHHRFSNFVVGSLNGRLCVV 330

Query: 634 CFQLEVDVKIWVMEEYGVVESWKK 705
               EV   IWVM EYG V+SW +
Sbjct: 331 NSCYEVHDDIWVMSEYGEVKSWSR 354