BLASTX nr result

ID: Cimicifuga21_contig00005361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005361
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270702.1| PREDICTED: eukaryotic translation initiation...   372   e-101
emb|CAN64883.1| hypothetical protein VITISV_030619 [Vitis vinifera]   372   e-101
ref|XP_003519137.1| PREDICTED: eukaryotic translation initiation...   367   2e-99
ref|XP_003552707.1| PREDICTED: eukaryotic translation initiation...   367   3e-99
ref|XP_002305183.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99

>ref|XP_002270702.1| PREDICTED: eukaryotic translation initiation factor 5-like [Vitis
           vinifera]
          Length = 458

 Score =  372 bits (955), Expect = e-101
 Identities = 188/223 (84%), Positives = 201/223 (90%), Gaps = 4/223 (1%)
 Frame = -2

Query: 659 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 480
           MALQNIGAGN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAGNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 479 CELGAQSKFDEKTGVSLVNGSHETAKLAGLLESFIKKYVQCYGCGNPETEIIITKTQMLQ 300
           CELGAQSKFDEKTGVSLVNG+H+T KLAGLLE+FIKKYVQCYGCGNPETEI+ITKTQM+Q
Sbjct: 61  CELGAQSKFDEKTGVSLVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITKTQMIQ 120

Query: 299 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEAQKKL 120
           LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGE ADE  +KL
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELRKL 180

Query: 119 K---KKGAVNTSKDGASRGAVAKKKAL-SDEDNNSPAGSQADE 3
           K   KK   +TSKDG ++   +KKKA  SDED  SP  SQ DE
Sbjct: 181 KKEVKKKGSSTSKDGPTKSLSSKKKANGSDEDRTSPPRSQVDE 223


>emb|CAN64883.1| hypothetical protein VITISV_030619 [Vitis vinifera]
          Length = 459

 Score =  372 bits (955), Expect = e-101
 Identities = 188/223 (84%), Positives = 201/223 (90%), Gaps = 4/223 (1%)
 Frame = -2

Query: 659 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 480
           MALQNIGAGN DDAFYRYKMP+M+TKIEGRGNGIKTNVVNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAGNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 479 CELGAQSKFDEKTGVSLVNGSHETAKLAGLLESFIKKYVQCYGCGNPETEIIITKTQMLQ 300
           CELGAQSKFDEKTGVSLVNG+H+T KLAGLLE+FIKKYVQCYGCGNPETEI+ITKTQM+Q
Sbjct: 61  CELGAQSKFDEKTGVSLVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITKTQMIQ 120

Query: 299 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEAQKKL 120
           LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGE ADE  +KL
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEAADEELRKL 180

Query: 119 K---KKGAVNTSKDGASRGAVAKKKAL-SDEDNNSPAGSQADE 3
           K   KK   +TSKDG ++   +KKKA  SDED  SP  SQ DE
Sbjct: 181 KKEVKKKGSSTSKDGPTKSLSSKKKANGSDEDRTSPPRSQVDE 223


>ref|XP_003519137.1| PREDICTED: eukaryotic translation initiation factor 5-like [Glycine
           max]
          Length = 442

 Score =  367 bits (943), Expect = 2e-99
 Identities = 186/223 (83%), Positives = 199/223 (89%), Gaps = 4/223 (1%)
 Frame = -2

Query: 659 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 480
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 479 CELGAQSKFDEKTGVSLVNGSHETAKLAGLLESFIKKYVQCYGCGNPETEIIITKTQMLQ 300
           CELGAQSKFDEKTG S VNG+H+T KLAGLLE+FIKKYVQCYGCGNPETEIIITK QM+Q
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 299 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEAQKKL 120
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKERLKEGE+ADE QKK+
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGEMADEEQKKV 180

Query: 119 K---KKGAVNTSKDGASRGAVAKKKAL-SDEDNNSPAGSQADE 3
           K   KK   ++SKDG ++   +KKKA  SDED  SP  SQ DE
Sbjct: 181 KKEVKKKGSSSSKDGTAKSTSSKKKASGSDEDRTSPTHSQIDE 223


>ref|XP_003552707.1| PREDICTED: eukaryotic translation initiation factor 5-like [Glycine
           max]
          Length = 439

 Score =  367 bits (941), Expect = 3e-99
 Identities = 185/222 (83%), Positives = 197/222 (88%), Gaps = 3/222 (1%)
 Frame = -2

Query: 659 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 480
           MALQNIGA NSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFG 60

Query: 479 CELGAQSKFDEKTGVSLVNGSHETAKLAGLLESFIKKYVQCYGCGNPETEIIITKTQMLQ 300
           CELGAQSKFDEKTG S VNG+H+TAKLAGLLE+FIKKYVQCYGCGNPETEIIITK QM+Q
Sbjct: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQ 120

Query: 299 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEAQKKL 120
           LKCAACGFVSDVDMRDKLTTFI+KNPPE KKGSKDKKAMRRAEKERLKEGE+ADE QKK+
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEEQKKV 180

Query: 119 K---KKGAVNTSKDGASRGAVAKKKALSDEDNNSPAGSQADE 3
           K   KK   ++SKDG    +  KK + SDED  SP  SQ DE
Sbjct: 181 KKEVKKKGSSSSKDGTKSTSSKKKASGSDEDRTSPTHSQIDE 222


>ref|XP_002305183.1| predicted protein [Populus trichocarpa] gi|222848147|gb|EEE85694.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  366 bits (940), Expect = 4e-99
 Identities = 184/222 (82%), Positives = 199/222 (89%), Gaps = 3/222 (1%)
 Frame = -2

Query: 659 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 480
           MALQNIGA NSDDAFYRYKMP+M+TK+EGRGNGIKTN+VNMV+IAKALARPA+YTTKYFG
Sbjct: 1   MALQNIGASNSDDAFYRYKMPKMVTKVEGRGNGIKTNIVNMVEIAKALARPASYTTKYFG 60

Query: 479 CELGAQSKFDEKTGVSLVNGSHETAKLAGLLESFIKKYVQCYGCGNPETEIIITKTQMLQ 300
           CELGAQSKFDEKTG SLVNGSHETAKLAGLLE+FIKKYVQCYGCGNPETEIIITK+QMLQ
Sbjct: 61  CELGAQSKFDEKTGTSLVNGSHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKSQMLQ 120

Query: 299 LKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEAQKKL 120
           LKCAACGFVSDVDMRDKLTTFILKNPPE KKG+KDKKA+RRAEKERLKEGE ADE  KKL
Sbjct: 121 LKCAACGFVSDVDMRDKLTTFILKNPPESKKGAKDKKALRRAEKERLKEGEAADEELKKL 180

Query: 119 KKKGAVNTS--KDGASRGAVAKKKA-LSDEDNNSPAGSQADE 3
           KK+G    S  KDG ++ +  KKKA  SDE+  SP  SQ DE
Sbjct: 181 KKEGKKKGSSLKDGPAKASSTKKKANSSDEERMSPTHSQVDE 222


Top