BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005355
         (1506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   490   e-136
ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycin...   485   e-134
ref|XP_003555897.1| PREDICTED: putative DNA repair protein RAD23...   480   e-133
ref|XP_002315945.1| predicted protein [Populus trichocarpa] gi|2...   459   e-126
ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23...   451   e-124

>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
            gi|297737829|emb|CBI27030.3| unnamed protein product
            [Vitis vinifera]
          Length = 397

 Score =  490 bits (1261), Expect = e-136
 Identities = 271/402 (67%), Positives = 287/402 (71%), Gaps = 13/402 (3%)
 Frame = +2

Query: 92   MKVFVKTLKGTHFEIEVKPEDTVADVKQTIENVQGVDVYPAAQQMLIHQGKVLKDATTLD 271
            MK+FVKTLKGTHFEI+VKPEDTVADVK  IE VQG DVYPA+QQMLIHQGKVLKD TTLD
Sbjct: 1    MKIFVKTLKGTHFEIQVKPEDTVADVKANIEAVQGSDVYPASQQMLIHQGKVLKDGTTLD 60

Query: 272  ENKVVEESFLVIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQTXXXXXX 451
            ENKV E SF+V+ML                                    P  T      
Sbjct: 61   ENKVAENSFVVVMLSKNKNSSEGSTASTAPAPAPAPAPTPIVKAPSASAPPPTTTSTLTA 120

Query: 452  XXXXXXXXXXXXTV-APS------------TESDVYGQAASSLVAGSNMEGAIQQILDMG 592
                        TV AP+            +E+D YGQAAS+LVAG+N E AIQQILDMG
Sbjct: 121  PQAPVVALPPPATVPAPAPAATPASTVTVVSETDAYGQAASNLVAGNNFEEAIQQILDMG 180

Query: 593  GGTWDRDIVLRALRAAYNNPERAVEYLYSGIPEQAEVPLXXXXXXXXXXXXXXXXXXXXX 772
            GGTWDRD V+RALRAAYNNPERAVEYLYSGIPEQAEVP                      
Sbjct: 181  GGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQAEVP----PVARAPASGQAANPPAQS 236

Query: 773  XXXXXXXXSGPNANPLDLFPQGLPNMGGSNAAGAGTLDFLRNSQQFQALRAMVQANPQIL 952
                    SGPNANPLDLFPQG+PN+ GSN AGAGTLDFLRNSQQFQALRAMVQANPQIL
Sbjct: 237  QQPVPAPSSGPNANPLDLFPQGIPNV-GSNPAGAGTLDFLRNSQQFQALRAMVQANPQIL 295

Query: 953  QPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGGEGNALGQLAAAMPQSVTVTPEERE 1132
            QPMLQELGKQNP LMRLIQEHQADFLRLINEPVEGGEGN LGQLAAAMPQ+VTVTPEERE
Sbjct: 296  QPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGGEGNILGQLAAAMPQAVTVTPEERE 355

Query: 1133 SIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 1258
            +I RLEAMGFDRA+VLEVFFACNKNEELAANYLLDHMHEFED
Sbjct: 356  AIARLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFED 397


>ref|NP_001240201.1| uncharacterized protein LOC100809066 [Glycine max]
            gi|255644546|gb|ACU22776.1| unknown [Glycine max]
          Length = 392

 Score =  485 bits (1248), Expect = e-134
 Identities = 262/394 (66%), Positives = 283/394 (71%), Gaps = 5/394 (1%)
 Frame = +2

Query: 92   MKVFVKTLKGTHFEIEVKPEDTVADVKQTIENVQGVDVYPAAQQMLIHQGKVLKDATTLD 271
            MKVFVKTLKGTHFEIEV P DT+++VK+ IE VQG DVYPAAQQMLIHQGKVLKD TTL+
Sbjct: 1    MKVFVKTLKGTHFEIEVNPSDTLSEVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLE 60

Query: 272  ENKVVEESFLVIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQTXXXXXX 451
            ENKV E SF+VIML                                    P  T      
Sbjct: 61   ENKVAENSFIVIMLSKTKSSSGEGSTTSTAPSVKASATPTSTSVSAAPQAPASTGATPTP 120

Query: 452  XXXXXXXXXXXXTVAPST-----ESDVYGQAASSLVAGSNMEGAIQQILDMGGGTWDRDI 616
                            S+     ESD+YGQAAS+LVAGSN+EG IQQILDMGGG+WDRD 
Sbjct: 121  VTAPAAPASAAAPAPISSGSAVPESDIYGQAASNLVAGSNLEGTIQQILDMGGGSWDRDT 180

Query: 617  VLRALRAAYNNPERAVEYLYSGIPEQAEVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 796
            V+RALRAAYNNPERAVEYLYSGIPEQAE P                              
Sbjct: 181  VVRALRAAYNNPERAVEYLYSGIPEQAEAP-PVTREPASAQPANPPAAAPQAAQPASVPS 239

Query: 797  SGPNANPLDLFPQGLPNMGGSNAAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELG 976
            SGPNANPLDLFPQGLPN+G S AAGAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELG
Sbjct: 240  SGPNANPLDLFPQGLPNVG-SGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELG 298

Query: 977  KQNPHLMRLIQEHQADFLRLINEPVEGGEGNALGQLAAAMPQSVTVTPEERESIERLEAM 1156
            KQNPHLMRLIQEHQ DFLRLINEPVEGGEGN LGQLA+AMPQ+VTVTPEER++IERLEAM
Sbjct: 299  KQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQLASAMPQAVTVTPEERQAIERLEAM 358

Query: 1157 GFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 1258
            GFDRA VLEV+FACNKNEELAANYLLDHMHEF++
Sbjct: 359  GFDRATVLEVYFACNKNEELAANYLLDHMHEFDE 392


>ref|XP_003555897.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 3
            [Glycine max]
          Length = 381

 Score =  480 bits (1235), Expect = e-133
 Identities = 257/390 (65%), Positives = 286/390 (73%), Gaps = 1/390 (0%)
 Frame = +2

Query: 92   MKVFVKTLKGTHFEIEVKPEDTVADVKQTIENVQGVDVYPAAQQMLIHQGKVLKDATTLD 271
            MKVFVKTLKGTHFEIEV P+DTV++VK+ IE VQG DVYPAAQQMLIHQGKVL+DATTL+
Sbjct: 1    MKVFVKTLKGTHFEIEVTPQDTVSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDATTLE 60

Query: 272  ENKVVEESFLVIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQTXXXXXX 451
            ENKV E +F+VIML                                   +P         
Sbjct: 61   ENKVAENTFIVIMLSKTSTVPASTPPVSVAPQAPAPAATGA--------LPASVTAPVSS 112

Query: 452  XXXXXXXXXXXXTVAPSTE-SDVYGQAASSLVAGSNMEGAIQQILDMGGGTWDRDIVLRA 628
                        +   + E SD+YGQAAS+LVAGSN+EG IQQILDMGGG+WDRD V+RA
Sbjct: 113  PSPAPAPAPAPISSGTAVEGSDIYGQAASNLVAGSNLEGTIQQILDMGGGSWDRDTVVRA 172

Query: 629  LRAAYNNPERAVEYLYSGIPEQAEVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPN 808
            LRAAYNNPERAVEYLY+GIPEQAE PL                             +GPN
Sbjct: 173  LRAAYNNPERAVEYLYTGIPEQAEAPLVARAPVSAQPTNPPADAPQTAQPAAVTS-AGPN 231

Query: 809  ANPLDLFPQGLPNMGGSNAAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP 988
            ANPLDLFPQGLPN+G S AAGAG+LDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP
Sbjct: 232  ANPLDLFPQGLPNVG-SGAAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP 290

Query: 989  HLMRLIQEHQADFLRLINEPVEGGEGNALGQLAAAMPQSVTVTPEERESIERLEAMGFDR 1168
            HLMRLI++HQADFLRLINEP EGGEGN LGQ+A+ MPQ+VTVTPEER++IERLEAMGFDR
Sbjct: 291  HLMRLIRDHQADFLRLINEPAEGGEGNILGQMASGMPQAVTVTPEERQAIERLEAMGFDR 350

Query: 1169 AIVLEVFFACNKNEELAANYLLDHMHEFED 1258
            AIVLEV+FACNKNEELAANYLLDHMHEFE+
Sbjct: 351  AIVLEVYFACNKNEELAANYLLDHMHEFEE 380


>ref|XP_002315945.1| predicted protein [Populus trichocarpa] gi|222864985|gb|EEF02116.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  459 bits (1180), Expect = e-126
 Identities = 252/389 (64%), Positives = 274/389 (70%)
 Frame = +2

Query: 92   MKVFVKTLKGTHFEIEVKPEDTVADVKQTIENVQGVDVYPAAQQMLIHQGKVLKDATTLD 271
            MK+FVKTLKG+ F+IEVKP DTVADVK+ IE  QG  VYPA QQMLI+QGKVLKD TTL 
Sbjct: 1    MKIFVKTLKGSTFDIEVKPGDTVADVKKNIETAQGASVYPAEQQMLIYQGKVLKDDTTLG 60

Query: 272  ENKVVEESFLVIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQTXXXXXX 451
            ENKV E SF+VIML                                   +P         
Sbjct: 61   ENKVAENSFVVIMLSKAKSSSGEGSTTSAAPTPKVITLPTS--------VPSPAPAPAPA 112

Query: 452  XXXXXXXXXXXXTVAPSTESDVYGQAASSLVAGSNMEGAIQQILDMGGGTWDRDIVLRAL 631
                        + +   +S VYGQAAS+LVAG+N+EGA+QQILDMGGG+WDRD V+RAL
Sbjct: 113  PAPAPRSGFCSSSSSGFFKSGVYGQAASNLVAGNNLEGAVQQILDMGGGSWDRDTVVRAL 172

Query: 632  RAAYNNPERAVEYLYSGIPEQAEVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPNA 811
            RAAYNNPERAVEYLY+GIPEQAE P                               GPNA
Sbjct: 173  RAAYNNPERAVEYLYTGIPEQAEAP--PVAQVPVSEQAPAAQPRQQPAQPTTVPAGGPNA 230

Query: 812  NPLDLFPQGLPNMGGSNAAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH 991
            NPLDLFPQGLPN+G S AA AGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH
Sbjct: 231  NPLDLFPQGLPNIG-SGAAEAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH 289

Query: 992  LMRLIQEHQADFLRLINEPVEGGEGNALGQLAAAMPQSVTVTPEERESIERLEAMGFDRA 1171
            LMRLIQEHQ DFLRLINEPVEGGEGN  G LAAAMPQSVTVTPEERE+IERL AMGFD A
Sbjct: 290  LMRLIQEHQDDFLRLINEPVEGGEGNVSGPLAAAMPQSVTVTPEEREAIERLGAMGFDPA 349

Query: 1172 IVLEVFFACNKNEELAANYLLDHMHEFED 1258
            +VLEV+FACNKNEELAANYLLDH+HEFED
Sbjct: 350  LVLEVYFACNKNEELAANYLLDHIHEFED 378


>ref|XP_003555895.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
            [Glycine max]
          Length = 402

 Score =  451 bits (1161), Expect = e-124
 Identities = 246/403 (61%), Positives = 278/403 (68%), Gaps = 14/403 (3%)
 Frame = +2

Query: 92   MKVFVKTLKGTHFEIEVKPEDTVADVKQTIENVQGVDVYPAAQQMLIHQGKVLKDATTLD 271
            MKVFVKTLKGTHFEIEV P+DTV++VK+ IE VQG DVYPAAQQMLIHQGKVL+DATTL+
Sbjct: 1    MKVFVKTLKGTHFEIEVTPQDTVSEVKKNIETVQGADVYPAAQQMLIHQGKVLRDATTLE 60

Query: 272  ENKVVEESFLVIMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQTXXXXXX 451
            ENKV E +F+VIML                                   +  Q       
Sbjct: 61   ENKVAENTFIVIMLSKSKSTSGEGSTTSTALSTKAPQTSTVPASTPPVSVAPQAPAPAAT 120

Query: 452  XXXXXXXXXXXXTVAPSTESDVYGQAASSLVAGSNM--------------EGAIQQILDM 589
                        + +P+        ++ + V GS++              EG IQQILDM
Sbjct: 121  GALPASVTAPVSSPSPAPAPAPAPISSGTAVEGSDIYGQAASNLVAGSNLEGTIQQILDM 180

Query: 590  GGGTWDRDIVLRALRAAYNNPERAVEYLYSGIPEQAEVPLXXXXXXXXXXXXXXXXXXXX 769
            GGG+WDRD V+RALRAAYNNPERAVEYLY+GIPEQAE PL                    
Sbjct: 181  GGGSWDRDTVVRALRAAYNNPERAVEYLYTGIPEQAEAPL-VARAPVSAQPTNPPADAPQ 239

Query: 770  XXXXXXXXXSGPNANPLDLFPQGLPNMGGSNAAGAGTLDFLRNSQQFQALRAMVQANPQI 949
                     +GPNANPLDLFPQGLPN+ GS AAGAG+LDFLRNSQQFQALRAMVQANPQI
Sbjct: 240  TAQPAAVTSAGPNANPLDLFPQGLPNV-GSGAAGAGSLDFLRNSQQFQALRAMVQANPQI 298

Query: 950  LQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGGEGNALGQLAAAMPQSVTVTPEER 1129
            LQPMLQELGKQNPHLMRLI++HQADFLRLINEP EGGEGN LGQ+A+ MPQ+VTVTPEER
Sbjct: 299  LQPMLQELGKQNPHLMRLIRDHQADFLRLINEPAEGGEGNILGQMASGMPQAVTVTPEER 358

Query: 1130 ESIERLEAMGFDRAIVLEVFFACNKNEELAANYLLDHMHEFED 1258
            ++IERLEAMGFDRAIVLEV+FACNKNEELAANYLLDHMHEFE+
Sbjct: 359  QAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDHMHEFEE 401