BLASTX nr result

ID: Cimicifuga21_contig00005339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005339
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297611.1| hypothetical protein POPTRDRAFT_547568 [Popu...   325   2e-86
ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...   324   3e-86
emb|CAN82746.1| hypothetical protein VITISV_024594 [Vitis vinife...   324   3e-86
gb|AFZ78605.1| expansin protein [Populus tomentosa]                   320   6e-85
ref|XP_002523388.1| Alpha-expansin 1 precursor, putative [Ricinu...   316   8e-84

>ref|XP_002297611.1| hypothetical protein POPTRDRAFT_547568 [Populus trichocarpa]
            gi|222844869|gb|EEE82416.1| hypothetical protein
            POPTRDRAFT_547568 [Populus trichocarpa]
          Length = 247

 Score =  325 bits (832), Expect = 2e-86
 Identities = 162/244 (66%), Positives = 179/244 (73%)
 Frame = -1

Query: 1397 LGFSLVALLTMFXXXXXXXXXXXXXXXTFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAAL 1218
            LG+++V LLTM                TFY             GYGNLYSQGYGTNTAAL
Sbjct: 4    LGYTIVILLTMLKIVKGYGTGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 63

Query: 1217 STALFNNGLSCGACYEIKCVNDPGWCLPGSIIVTATNFCXXXXXXXXXAGGWCNPPQQHF 1038
            STALFNNGLSCGACYEIKCVND  WCL GSI VTATNFC          GGWCNPPQQHF
Sbjct: 64   STALFNNGLSCGACYEIKCVNDNIWCLRGSITVTATNFCPPNNALPNNDGGWCNPPQQHF 123

Query: 1037 DLSQPVYQRIAKYKAGIVPVQFRRVACRKSGGIRFTINGHTYFNLVLVTNVGGLGDVVAV 858
            DLSQPV+Q+IA+YKAGIVPVQ+RRVACRKSGGIRFTINGH+YFNLVL+TNVGG GDVVAV
Sbjct: 124  DLSQPVFQKIAQYKAGIVPVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDVVAV 183

Query: 857  SVKGSRTGWQAMSRXXXXXXXXXXXXXXXXXSFKVTTSDGRSVVSNNVTPSNWGFGKTFS 678
            S+KG+++ WQAMSR                 SFKVTTSDGR+VVSNNV PSNW FG+T++
Sbjct: 184  SIKGTKSNWQAMSRNWGQNWQSNTYLNNQALSFKVTTSDGRTVVSNNVAPSNWAFGQTYT 243

Query: 677  GRQF 666
            GRQF
Sbjct: 244  GRQF 247


>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score =  324 bits (831), Expect = 3e-86
 Identities = 162/245 (66%), Positives = 178/245 (72%)
 Frame = -1

Query: 1400 FLGFSLVALLTMFXXXXXXXXXXXXXXXTFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAA 1221
            FLG+ +VALLT                 TFY             GYGNLYSQGYGTNTAA
Sbjct: 313  FLGYIIVALLTGLKSVEGFGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 372

Query: 1220 LSTALFNNGLSCGACYEIKCVNDPGWCLPGSIIVTATNFCXXXXXXXXXAGGWCNPPQQH 1041
            LSTALFNNGLSCGACYE+KCVND  WCLPGSI VTATNFC         AGGWCNPP QH
Sbjct: 373  LSTALFNNGLSCGACYEVKCVNDKRWCLPGSITVTATNFCPPNNALTNNAGGWCNPPLQH 432

Query: 1040 FDLSQPVYQRIAKYKAGIVPVQFRRVACRKSGGIRFTINGHTYFNLVLVTNVGGLGDVVA 861
            FDLSQPV+Q IA+YKAGIVPVQ+RRVAC+K+GGIRFT+NGH+YFNLVL+TNVGG GDVV+
Sbjct: 433  FDLSQPVFQHIAQYKAGIVPVQYRRVACKKTGGIRFTVNGHSYFNLVLITNVGGAGDVVS 492

Query: 860  VSVKGSRTGWQAMSRXXXXXXXXXXXXXXXXXSFKVTTSDGRSVVSNNVTPSNWGFGKTF 681
            VS+KGS+T WQAMSR                 SFKVTTSDGRSVVSNNV P NW FG+TF
Sbjct: 493  VSIKGSKTSWQAMSRNWGQNWQSNTYLNGQALSFKVTTSDGRSVVSNNVAPPNWDFGQTF 552

Query: 680  SGRQF 666
            +GRQF
Sbjct: 553  NGRQF 557


>emb|CAN82746.1| hypothetical protein VITISV_024594 [Vitis vinifera]
            gi|297746516|emb|CBI16572.3| unnamed protein product
            [Vitis vinifera]
          Length = 247

 Score =  324 bits (831), Expect = 3e-86
 Identities = 162/245 (66%), Positives = 178/245 (72%)
 Frame = -1

Query: 1400 FLGFSLVALLTMFXXXXXXXXXXXXXXXTFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAA 1221
            FLG+ +VALLT                 TFY             GYGNLYSQGYGTNTAA
Sbjct: 3    FLGYIIVALLTGLKSVEGFGGGWSNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 62

Query: 1220 LSTALFNNGLSCGACYEIKCVNDPGWCLPGSIIVTATNFCXXXXXXXXXAGGWCNPPQQH 1041
            LSTALFNNGLSCGACYE+KCVND  WCLPGSI VTATNFC         AGGWCNPP QH
Sbjct: 63   LSTALFNNGLSCGACYEVKCVNDKRWCLPGSITVTATNFCPPNNALTNNAGGWCNPPLQH 122

Query: 1040 FDLSQPVYQRIAKYKAGIVPVQFRRVACRKSGGIRFTINGHTYFNLVLVTNVGGLGDVVA 861
            FDLSQPV+Q IA+YKAGIVPVQ+RRVAC+K+GGIRFT+NGH+YFNLVL+TNVGG GDVV+
Sbjct: 123  FDLSQPVFQHIAQYKAGIVPVQYRRVACKKTGGIRFTVNGHSYFNLVLITNVGGAGDVVS 182

Query: 860  VSVKGSRTGWQAMSRXXXXXXXXXXXXXXXXXSFKVTTSDGRSVVSNNVTPSNWGFGKTF 681
            VS+KGS+T WQAMSR                 SFKVTTSDGRSVVSNNV P NW FG+TF
Sbjct: 183  VSIKGSKTSWQAMSRNWGQNWQSNTYLNGQALSFKVTTSDGRSVVSNNVAPPNWDFGQTF 242

Query: 680  SGRQF 666
            +GRQF
Sbjct: 243  NGRQF 247


>gb|AFZ78605.1| expansin protein [Populus tomentosa]
          Length = 247

 Score =  320 bits (820), Expect = 6e-85
 Identities = 160/244 (65%), Positives = 177/244 (72%)
 Frame = -1

Query: 1397 LGFSLVALLTMFXXXXXXXXXXXXXXXTFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAAL 1218
            LG+++V LLTM                TFY             GYGNLYSQGYGTNTAAL
Sbjct: 4    LGYTMVILLTMLKIVKGYGTGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 63

Query: 1217 STALFNNGLSCGACYEIKCVNDPGWCLPGSIIVTATNFCXXXXXXXXXAGGWCNPPQQHF 1038
            STALFNNGLSCGACYEIKCVND  WCL  SIIVTATNFC          GGWCNPPQQHF
Sbjct: 64   STALFNNGLSCGACYEIKCVNDNTWCLQESIIVTATNFCPPNNALPNNDGGWCNPPQQHF 123

Query: 1037 DLSQPVYQRIAKYKAGIVPVQFRRVACRKSGGIRFTINGHTYFNLVLVTNVGGLGDVVAV 858
            DLSQPV+Q+IA+YKAGIVPVQ+RRVACRKSGGIRFTINGH+YFNLVL+TNVGG GDVVAV
Sbjct: 124  DLSQPVFQKIAQYKAGIVPVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDVVAV 183

Query: 857  SVKGSRTGWQAMSRXXXXXXXXXXXXXXXXXSFKVTTSDGRSVVSNNVTPSNWGFGKTFS 678
            S+KG+ + WQAMSR                 SF+VTTSDGR+VVSNNV PSNW FG+T++
Sbjct: 184  SIKGTTSNWQAMSRNWGQNWQSNTYLNNQALSFRVTTSDGRTVVSNNVAPSNWAFGQTYT 243

Query: 677  GRQF 666
            G QF
Sbjct: 244  GSQF 247


>ref|XP_002523388.1| Alpha-expansin 1 precursor, putative [Ricinus communis]
            gi|223537338|gb|EEF38967.1| Alpha-expansin 1 precursor,
            putative [Ricinus communis]
          Length = 247

 Score =  316 bits (810), Expect = 8e-84
 Identities = 154/242 (63%), Positives = 176/242 (72%)
 Frame = -1

Query: 1391 FSLVALLTMFXXXXXXXXXXXXXXXTFYXXXXXXXXXXXXXGYGNLYSQGYGTNTAALST 1212
            +++VALL++                TFY             GYGNLYSQGYGTNTAALST
Sbjct: 6    YTIVALLSILRTVEGYGSGWTNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 65

Query: 1211 ALFNNGLSCGACYEIKCVNDPGWCLPGSIIVTATNFCXXXXXXXXXAGGWCNPPQQHFDL 1032
            ALFN+GLSCGAC+EIKCVND  WCLPGSII+TATNFC          GGWCNPPQQHFDL
Sbjct: 66   ALFNSGLSCGACFEIKCVNDNKWCLPGSIIITATNFCPPNLALPNNNGGWCNPPQQHFDL 125

Query: 1031 SQPVYQRIAKYKAGIVPVQFRRVACRKSGGIRFTINGHTYFNLVLVTNVGGLGDVVAVSV 852
            SQPV+QRIA+Y+AGIVPVQ+RRV CRK+GGIRFTINGH+YFNLVL+TNVGG GD+VAVS+
Sbjct: 126  SQPVFQRIAQYRAGIVPVQYRRVPCRKTGGIRFTINGHSYFNLVLITNVGGAGDIVAVSI 185

Query: 851  KGSRTGWQAMSRXXXXXXXXXXXXXXXXXSFKVTTSDGRSVVSNNVTPSNWGFGKTFSGR 672
            KGS T WQAMSR                 SFKVTTSDGR+V+SNN  PSNW FG+T++G 
Sbjct: 186  KGSNTNWQAMSRNWGQNWQSSSYLNGQSLSFKVTTSDGRTVISNNAAPSNWAFGQTYTGM 245

Query: 671  QF 666
            QF
Sbjct: 246  QF 247


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