BLASTX nr result

ID: Cimicifuga21_contig00005331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005331
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-li...   241   2e-61
ref|XP_002284738.1| PREDICTED: probable histone H2A variant 3 [V...   238   9e-61
ref|NP_001235400.1| uncharacterized protein LOC100499998 [Glycin...   236   3e-60
ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [V...   236   5e-60
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   234   1e-59

>ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-like [Cucumis sativus]
           gi|449519192|ref|XP_004166619.1| PREDICTED: probable
           histone H2A variant 3-like [Cucumis sativus]
          Length = 134

 Score =  241 bits (614), Expect = 2e-61
 Identities = 124/134 (92%), Positives = 130/134 (97%), Gaps = 3/134 (2%)
 Frame = +1

Query: 112 MSGKGAKGLIMGKA---NKDKDKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATA 282
           MSGKGAKGLIMGK+   NKDKDKK+PVSRSSRAGLQFPVGR+HR LKSR+AANGRVGATA
Sbjct: 1   MSGKGAKGLIMGKSAANNKDKDKKKPVSRSSRAGLQFPVGRVHRQLKSRVAANGRVGATA 60

Query: 283 AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 462
           AVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61  AVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 120

Query: 463 PHIHKSLINKSTKE 504
           PHIHKSLINKS+KE
Sbjct: 121 PHIHKSLINKSSKE 134


>ref|XP_002284738.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|296081964|emb|CBI20969.3| unnamed protein product
           [Vitis vinifera]
          Length = 134

 Score =  238 bits (608), Expect = 9e-61
 Identities = 124/134 (92%), Positives = 129/134 (96%), Gaps = 3/134 (2%)
 Frame = +1

Query: 112 MSGKGAKGLIMGKA---NKDKDKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATA 282
           MSGKGAKGLIMGK+   NKDKDKK+PVSRSSRAGLQFPVGRIHR LKSR+ ANGRVGATA
Sbjct: 1   MSGKGAKGLIMGKSPALNKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVTANGRVGATA 60

Query: 283 AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 462
           AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61  AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 120

Query: 463 PHIHKSLINKSTKE 504
           PHIHKSLINKS+K+
Sbjct: 121 PHIHKSLINKSSKD 134


>ref|NP_001235400.1| uncharacterized protein LOC100499998 [Glycine max]
           gi|255628411|gb|ACU14550.1| unknown [Glycine max]
          Length = 134

 Score =  236 bits (603), Expect = 3e-60
 Identities = 124/134 (92%), Positives = 127/134 (94%), Gaps = 3/134 (2%)
 Frame = +1

Query: 112 MSGKGAKGLIMGK---ANKDKDKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATA 282
           MSGKGAKGLI GK   ANKDKDKK+P+SRSSRAGLQFPVGRIHR LKSR  ANGRVGATA
Sbjct: 1   MSGKGAKGLITGKTSAANKDKDKKKPISRSSRAGLQFPVGRIHRLLKSRTTANGRVGATA 60

Query: 283 AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 462
           AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61  AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 120

Query: 463 PHIHKSLINKSTKE 504
           PHIHKSLINKS+KE
Sbjct: 121 PHIHKSLINKSSKE 134


>ref|XP_002285266.1| PREDICTED: probable histone H2A variant 3 [Vitis vinifera]
           gi|147787162|emb|CAN64650.1| hypothetical protein
           VITISV_002812 [Vitis vinifera]
           gi|297743375|emb|CBI36242.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  236 bits (602), Expect = 5e-60
 Identities = 121/136 (88%), Positives = 130/136 (95%), Gaps = 5/136 (3%)
 Frame = +1

Query: 112 MSGKGAKGLIMGKA-----NKDKDKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGA 276
           MSGKGAKGLIMGK+     NKDKDKK+P+SRSSRAGLQFPVGR+HR LK+R++ANGRVGA
Sbjct: 1   MSGKGAKGLIMGKSSTLNGNKDKDKKKPISRSSRAGLQFPVGRVHRLLKTRVSANGRVGA 60

Query: 277 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 456
           TAAVY+AAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61  TAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120

Query: 457 VIPHIHKSLINKSTKE 504
           VIPHIHKSLINKS+KE
Sbjct: 121 VIPHIHKSLINKSSKE 136


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  234 bits (598), Expect = 1e-59
 Identities = 123/136 (90%), Positives = 128/136 (94%), Gaps = 5/136 (3%)
 Frame = +1

Query: 112 MSGKGAKGLIMGKAN-----KDKDKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGA 276
           MSGKGAKGLI GK +     KDKDKK+PVSRSSRAGLQFPVGRIHR LKSR++ANGRVGA
Sbjct: 1   MSGKGAKGLITGKTSASAKDKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVSANGRVGA 60

Query: 277 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 456
           TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61  TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120

Query: 457 VIPHIHKSLINKSTKE 504
           VIPHIHKSLINKS+KE
Sbjct: 121 VIPHIHKSLINKSSKE 136


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