BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005297
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19279.3| unnamed protein product [Vitis vinifera]              270   4e-70
ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding prote...   270   4e-70
ref|XP_002307335.1| predicted protein [Populus trichocarpa] gi|2...   257   5e-66
ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|2...   257   5e-66
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...   252   1e-64

>emb|CBI19279.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  270 bits (691), Expect = 4e-70
 Identities = 140/204 (68%), Positives = 159/204 (77%)
 Frame = -3

Query: 1002 MSITNGFAGVSNCYVFKSRLQEYAQKAGFLTPVYETVKEGPSHQPCFRSTVIVDNVRYDS 823
            MS  +GFAGVSNCYVFKSRLQEYAQK G  TP+Y+T+KEGP H P F+STVIV++VRYDS
Sbjct: 1    MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 822  LPGFSNRKAAEQSAAEVALLELAKSGNLKESISYPVHETGLCKNLLQEYAQKMNYAIPSY 643
            LPGFSNRKAAEQSAAEVAL+ELAKSGN+KE IS PVHETGLCKNLLQEYAQKMNYAIP Y
Sbjct: 61   LPGFSNRKAAEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMY 120

Query: 642  ICRSNEAPGRKALFSCTVDIGGIMYIGXXXXXXXXXXXXXARTALLAIQSQSNTNGVEVE 463
            +C+ +E+PGR A FSCTV+IGGI YIG             ARTALLAI  ++NT+GV  +
Sbjct: 121  VCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAI--RANTDGVGEK 178

Query: 462  PNDGRHLTVLPCKNKGAESDGKKE 391
                  LTV+P K KG ES    E
Sbjct: 179  SIGNTQLTVIPGKKKGPESGNPDE 202


>ref|XP_002285663.1| PREDICTED: double-stranded RNA-binding protein 1 [Vitis vinifera]
            gi|147781065|emb|CAN68128.1| hypothetical protein
            VITISV_043706 [Vitis vinifera]
          Length = 400

 Score =  270 bits (691), Expect = 4e-70
 Identities = 140/204 (68%), Positives = 159/204 (77%)
 Frame = -3

Query: 1002 MSITNGFAGVSNCYVFKSRLQEYAQKAGFLTPVYETVKEGPSHQPCFRSTVIVDNVRYDS 823
            MS  +GFAGVSNCYVFKSRLQEYAQK G  TP+Y+T+KEGP H P F+STVIV++VRYDS
Sbjct: 1    MSSNDGFAGVSNCYVFKSRLQEYAQKVGLPTPLYDTIKEGPPHVPSFKSTVIVNDVRYDS 60

Query: 822  LPGFSNRKAAEQSAAEVALLELAKSGNLKESISYPVHETGLCKNLLQEYAQKMNYAIPSY 643
            LPGFSNRKAAEQSAAEVAL+ELAKSGN+KE IS PVHETGLCKNLLQEYAQKMNYAIP Y
Sbjct: 61   LPGFSNRKAAEQSAAEVALVELAKSGNMKECISQPVHETGLCKNLLQEYAQKMNYAIPMY 120

Query: 642  ICRSNEAPGRKALFSCTVDIGGIMYIGXXXXXXXXXXXXXARTALLAIQSQSNTNGVEVE 463
            +C+ +E+PGR A FSCTV+IGGI YIG             ARTALLAI  ++NT+GV  +
Sbjct: 121  VCQKDESPGRAASFSCTVEIGGIRYIGAAARTKKEAEIKAARTALLAI--RANTDGVGEK 178

Query: 462  PNDGRHLTVLPCKNKGAESDGKKE 391
                  LTV+P K KG ES    E
Sbjct: 179  SIGNTQLTVIPGKKKGPESGNPDE 202


>ref|XP_002307335.1| predicted protein [Populus trichocarpa] gi|222856784|gb|EEE94331.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  257 bits (656), Expect = 5e-66
 Identities = 131/197 (66%), Positives = 150/197 (76%)
 Frame = -3

Query: 981 AGVSNCYVFKSRLQEYAQKAGFLTPVYETVKEGPSHQPCFRSTVIVDNVRYDSLPGFSNR 802
           +GVSNCYVFKSRLQEYAQKAG  TPVYET+KEGPSH+P FRSTVIV  VRYDSLPGF NR
Sbjct: 1   SGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVKEVRYDSLPGFFNR 60

Query: 801 KAAEQSAAEVALLELAKSGNLKESISYPVHETGLCKNLLQEYAQKMNYAIPSYICRSNEA 622
           KAAEQSAAEVAL+ELAK+G + ES S PVHETGLCKNLLQEYAQKMNYAIP Y C+ +E 
Sbjct: 61  KAAEQSAAEVALVELAKAGQINESTSQPVHETGLCKNLLQEYAQKMNYAIPLYECQKDET 120

Query: 621 PGRKALFSCTVDIGGIMYIGXXXXXXXXXXXXXARTALLAIQSQSNTNGVEVEPNDGRHL 442
           PGR  +F CTV+IGGI YIG             ARTALLAIQS  +      +P+    L
Sbjct: 121 PGRGLVFKCTVEIGGIRYIGASAKTKKEAEIKAARTALLAIQSSGSD-----KPSGNSQL 175

Query: 441 TVLPCKNKGAESDGKKE 391
           TV+PC+ +G E+  ++E
Sbjct: 176 TVIPCRKRGVETSVQEE 192


>ref|XP_002302370.1| predicted protein [Populus trichocarpa] gi|222844096|gb|EEE81643.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  257 bits (656), Expect = 5e-66
 Identities = 132/204 (64%), Positives = 153/204 (75%)
 Frame = -3

Query: 1002 MSITNGFAGVSNCYVFKSRLQEYAQKAGFLTPVYETVKEGPSHQPCFRSTVIVDNVRYDS 823
            M    GF+GVSNCYVFKSRLQEYAQKAG  TPVYET+KEGPSH+P FRSTVIV +VRYDS
Sbjct: 1    MLTNEGFSGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVKDVRYDS 60

Query: 822  LPGFSNRKAAEQSAAEVALLELAKSGNLKESISYPVHETGLCKNLLQEYAQKMNYAIPSY 643
            LPGF NRKAAEQSAAEVAL+ELAK+G + ES S PV+ETGLCKNLLQEYAQKMNYAIP Y
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELAKAGEINESTSQPVNETGLCKNLLQEYAQKMNYAIPLY 120

Query: 642  ICRSNEAPGRKALFSCTVDIGGIMYIGXXXXXXXXXXXXXARTALLAIQSQSNTNGVEVE 463
             C+ +E PGR  +F CTV+IGGI YIG             ARTALLAIQS  +      +
Sbjct: 121  ECQKDETPGRGLVFKCTVEIGGIRYIGASTKTKKEAEIKAARTALLAIQSSGSD-----K 175

Query: 462  PNDGRHLTVLPCKNKGAESDGKKE 391
             +    LTV+PC+ +G E+  ++E
Sbjct: 176  QSGSSQLTVIPCRKRGVEASFQEE 199


>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  252 bits (643), Expect = 1e-64
 Identities = 130/199 (65%), Positives = 150/199 (75%)
 Frame = -3

Query: 1002 MSITNGFAGVSNCYVFKSRLQEYAQKAGFLTPVYETVKEGPSHQPCFRSTVIVDNVRYDS 823
            M     F  VSNCYVFKSRLQEYAQKAG  TPVYET+KEGPSH+P FRSTVIV++VRYDS
Sbjct: 1    MPTNEDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 60

Query: 822  LPGFSNRKAAEQSAAEVALLELAKSGNLKESISYPVHETGLCKNLLQEYAQKMNYAIPSY 643
            LPGF NRKAAEQSAAEVAL+EL KS  + +SI+ PVHETGLCKNLLQEYAQKMNYA+P Y
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMY 120

Query: 642  ICRSNEAPGRKALFSCTVDIGGIMYIGXXXXXXXXXXXXXARTALLAIQSQSNTNGVEVE 463
             C+ +E PGR ++FSCTVDIGGI+YIG             ARTALLAIQS ++    +  
Sbjct: 121  QCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQV 180

Query: 462  PNDGRHLTVLPCKNKGAES 406
             +    LTVLPC+ +  ES
Sbjct: 181  GHP--QLTVLPCRKRATES 197