BLASTX nr result
ID: Cimicifuga21_contig00005289
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005289
(2057 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera] 736 0.0
ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|2... 708 0.0
ref|XP_002872801.1| transducin family protein [Arabidopsis lyrat... 703 0.0
ref|NP_192211.2| transducin/WD40 domain-containing protein [Arab... 701 0.0
gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]... 701 0.0
>ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]
Length = 486
Score = 736 bits (1900), Expect = 0.0
Identities = 357/486 (73%), Positives = 411/486 (84%), Gaps = 1/486 (0%)
Frame = +2
Query: 335 MQFTDSEEEVSYEMGFAMSRLELDPNHCDEGEPSTEAIAARMPNEPLIEMDGDIAQITNL 514
M FT SE + EMG+AMSRLELD + CD G+ N+ L +D +I+Q+T L
Sbjct: 1 MYFTASEGAAN-EMGYAMSRLELDSDFCDAGKDIHGNDNTERLNKELNHLDHEISQLTKL 59
Query: 515 NTKPHDKLSRILPGEQALNVSTVKMLAGREFNYSGRGKFSSADCRHVLSRYLPVYGPWQV 694
+ PH+ LS+I+PG++ VSTVKMLAGRE NYSGRG+FSSADC H+LSRYLPV GPW V
Sbjct: 60 RSGPHECLSQIIPGKRDSPVSTVKMLAGREGNYSGRGRFSSADCCHMLSRYLPVNGPWLV 119
Query: 695 DKLKTRVYVSQFSSDGSLFIAGSQGSRIKVYNVDKGWKVQKDIHAKSLRWTVTDTSLSPD 874
D++ +R YVSQFS+DGSLF+AG QGS I++YNVD+GWKVQK+I AKSLRWTVTDTSLSPD
Sbjct: 120 DQMTSRAYVSQFSADGSLFVAGFQGSHIRIYNVDRGWKVQKNILAKSLRWTVTDTSLSPD 179
Query: 875 QNYLVYASMSPIVHIVNIGSAAKESHANVTELHDGLDFSVYGDGEFSFGIFSVKFSTDGR 1054
Q +LVYASMSPIVHIVNIGSAA ES AN+TE+HDGLDFS D +SFGIFSVKFSTDGR
Sbjct: 180 QRHLVYASMSPIVHIVNIGSAATESLANITEIHDGLDFSAADDEGYSFGIFSVKFSTDGR 239
Query: 1055 ELVAGSSDDSIYVYDLVANKLTLRIAAHSSDVNTVCFADETGHLIYSGSDDNLCKVWDRR 1234
ELVAGSSDDSIYVYDL ANKL+LRI AH+SDVNTVCFADE+GHLIYSGSDD+LCKVWDRR
Sbjct: 240 ELVAGSSDDSIYVYDLEANKLSLRILAHTSDVNTVCFADESGHLIYSGSDDSLCKVWDRR 299
Query: 1235 CFKANGKPAGVLMGHLEGITFIDSRGDGRHFISNGKDQTIKLWDIRKMSSNVSCGTKFRN 1414
CF + GKPAGVLMGHLEGITFIDSRGDGRH ISN KDQ+IKLWDIRKMSSN +C FRN
Sbjct: 300 CFISKGKPAGVLMGHLEGITFIDSRGDGRHLISNSKDQSIKLWDIRKMSSNATCTPGFRN 359
Query: 1415 YEWDYRWMDYPPDARRLKHPGDQSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSNDG 1594
YEWDYRWMDYP AR LKHP DQSL+TY+GHSVLRTLIRCYFSP+YSTGQKYIY+GS+D
Sbjct: 360 YEWDYRWMDYPTQARELKHPCDQSLSTYKGHSVLRTLIRCYFSPSYSTGQKYIYSGSSDS 419
Query: 1595 CVYIYDVVSGAQVARLEHHASTVRDCSWHPYYPMLVSCSWDGVLARCEFPGNGEKNR-RK 1771
C+YIYD+++GAQVA LEHH S VRDC+WHP YP+LVS SWDG + + EFPGNGE +K
Sbjct: 420 CIYIYDLLTGAQVATLEHHKSVVRDCNWHPNYPILVSSSWDGDIVKWEFPGNGEPPLIKK 479
Query: 1772 RLRKRY 1789
R+R++Y
Sbjct: 480 RIRRKY 485
>ref|XP_002320381.1| predicted protein [Populus trichocarpa] gi|222861154|gb|EEE98696.1|
predicted protein [Populus trichocarpa]
Length = 488
Score = 708 bits (1828), Expect = 0.0
Identities = 345/478 (72%), Positives = 398/478 (83%), Gaps = 3/478 (0%)
Frame = +2
Query: 371 EMGFAMSRLELDPNHCDEGEPSTEAIAARMPNEPLIEMDGDIAQITNLNTKPHDKLSRIL 550
EMG+AMSRLE + CD G+ EA +++ + L +D +IAQ+T L + PH +L+ ++
Sbjct: 12 EMGYAMSRLETESELCDGGKTIPEAGSSKRASNWLNNLDHEIAQVTKLKSSPHKQLAELV 71
Query: 551 PGEQALNVSTVKMLAGREFNYSGRGKFSSADCRHVLSRYLPVYGPWQVDKLKTRVYVSQF 730
PG +VSTVKML GRE NYS RG+FS+AD H+LSRYLPV GPW VD++ TR YVSQF
Sbjct: 72 PGMHKSSVSTVKMLVGREANYSARGRFSAADRCHMLSRYLPVNGPWLVDQMSTRAYVSQF 131
Query: 731 SSDGSLFIAGSQGSRIKVYNVDKGWKVQKDIHAKSLRWTVTDTSLSPDQNYLVYASMSPI 910
S+DGSLF+AG QGS I++YNV+KGWKVQK+I AKSLRWTVTDTSLSPDQ +LVYASMSPI
Sbjct: 132 SADGSLFVAGFQGSYIRIYNVEKGWKVQKNILAKSLRWTVTDTSLSPDQRHLVYASMSPI 191
Query: 911 VHIVNIGSAAKESHANVTELHDGLDFSVYGDGEFSFGIFSVKFSTDGRELVAGSSDDSIY 1090
VHIV+ GSA ES ANVTE HDGLDFS GDG +SFGIFSVKFSTDGRELVAGS+DDSIY
Sbjct: 192 VHIVDAGSAETESLANVTEFHDGLDFSS-GDGGYSFGIFSVKFSTDGRELVAGSNDDSIY 250
Query: 1091 VYDLVANKLTLRIAAHSSDVNTVCFADETGHLIYSGSDDNLCKVWDRRCFKANGKPAGVL 1270
VYDL NKL+LRI AH+SDVNTVCFADE+GHLI+SGSDDNLCKVWDRRCF A GKPAGVL
Sbjct: 251 VYDLEQNKLSLRILAHTSDVNTVCFADESGHLIFSGSDDNLCKVWDRRCFIAKGKPAGVL 310
Query: 1271 MGHLEGITFIDSRGDGRHFISNGKDQTIKLWDIRKMSSNVSCGTKFRNYEWDYRWMDYPP 1450
GHLEGITFIDS GDGR+FISNGKDQTIKLWDIRKM+ N + + RNYEWDYRWMDYP
Sbjct: 311 TGHLEGITFIDSHGDGRYFISNGKDQTIKLWDIRKMAPNATSYSGLRNYEWDYRWMDYPY 370
Query: 1451 DARRLKHPGDQSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSNDGCVYIYDVVSGAQ 1630
+AR LKHP DQS+ATY+GHSVLRTLIRCYFSP YSTGQKYIYTGS+D CVYIYD+V+G
Sbjct: 371 EARDLKHPCDQSVATYKGHSVLRTLIRCYFSPVYSTGQKYIYTGSHDSCVYIYDLVTGEL 430
Query: 1631 VARLEHHASTVRDCSWHPYYPMLVSCSWDGVLARCEFPGNGE---KNRRKRLRKRYED 1795
V+ L+HH S VRDCSWHPYYPMLVS SWDG + + EFPGNGE + +KR+R+R D
Sbjct: 431 VSLLQHHKSPVRDCSWHPYYPMLVSSSWDGDVVKWEFPGNGEAPVPSTKKRIRRRQFD 488
>ref|XP_002872801.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318638|gb|EFH49060.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 493
Score = 703 bits (1814), Expect = 0.0
Identities = 343/491 (69%), Positives = 407/491 (82%), Gaps = 6/491 (1%)
Frame = +2
Query: 335 MQFTDSEEEVSYEMGFAMSRLELDPNHCDEGEPST---EAIAARMPNEPLIEMDGDIAQI 505
M F SE + EMG+AMSRLE++ + CD G+ + A+ +E L ++D +I+Q+
Sbjct: 1 MFFGPSEIDTD-EMGYAMSRLEIESDLCDTGKDFCGVGSSSASHRSSEHLADLDHEISQV 59
Query: 506 TNLNTKPHDKLSRILPGEQALNVSTVKMLAGREFNYSGRGKFSSADCRHVLSRYLPVYGP 685
T L + PH + SR +PG L VSTV+MLAGRE N+SGRG+FS+ADC H+LSRYLP+ GP
Sbjct: 60 TKLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPIKGP 119
Query: 686 WQVDKLKTRVYVSQFSSDGSLFIAGSQGSRIKVYNVDKGWKVQKDIHAKSLRWTVTDTSL 865
W VD++ +R YVSQFS+DGSLFIAG QGSRI++YNV+KGWKVQKDI AKSLRWTVTDTSL
Sbjct: 120 WLVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSL 179
Query: 866 SPDQNYLVYASMSPIVHIVNIGSAAKESHANVTELHDGLDFSVYGDGEFSFGIFSVKFST 1045
SPDQ LVYASMSPIVHIV++GS ESHANVTE+HDGLDFS DG +SFGIFSVKFST
Sbjct: 180 SPDQRNLVYASMSPIVHIVDVGSGTTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFST 239
Query: 1046 DGRELVAGSSDDSIYVYDLVANKLTLRIAAHSSDVNTVCFADETGHLIYSGSDDNLCKVW 1225
DGR++VAGSSDDSIYVYDL AN+++LR AH+SDVNTVCFADE+G+LI SGSDDNLCKVW
Sbjct: 240 DGRDIVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVW 299
Query: 1226 DRRCFKANGKPAGVLMGHLEGITFIDSRGDGRHFISNGKDQTIKLWDIRKMSSNVSCGTK 1405
DRRCF KPAGVL+GHLEG+TFIDSRGDGR+FISNGKDQTIKLWDIRKMSS+ +
Sbjct: 300 DRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHE 359
Query: 1406 -FRNYEWDYRWMDYPPDARRLKHPGDQSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTG 1582
RNYEWDYRWMDYP +AR LKHP DQS++TY+GHSVLRTLIRCYFSPA+STGQKYIYTG
Sbjct: 360 VLRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTG 419
Query: 1583 SNDGCVYIYDVVSGAQVARLEHHASTVRDCSWHPYYPMLVSCSWDGVLARCEFPGNGEK- 1759
SND VYIYD+VSG +VA L+HH+S VRDC+WHPYYP L+S SWDG L + EFPG+GE
Sbjct: 420 SNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAP 479
Query: 1760 -NRRKRLRKRY 1789
+KR+R+R+
Sbjct: 480 IMSKKRVRRRH 490
>ref|NP_192211.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|334186335|ref|NP_001190666.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
gi|20466538|gb|AAM20586.1| putative WD-repeat protein
[Arabidopsis thaliana] gi|23198298|gb|AAN15676.1|
putative WD-repeat protein [Arabidopsis thaliana]
gi|332656861|gb|AEE82261.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
gi|332656862|gb|AEE82262.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 493
Score = 701 bits (1810), Expect = 0.0
Identities = 343/491 (69%), Positives = 406/491 (82%), Gaps = 6/491 (1%)
Frame = +2
Query: 335 MQFTDSEEEVSYEMGFAMSRLELDPNHCDEGEPST---EAIAARMPNEPLIEMDGDIAQI 505
M F SE + EMG+AMSRLE++ + CD G+ + + +E L ++D +I+Q+
Sbjct: 1 MFFGPSEFDAD-EMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQV 59
Query: 506 TNLNTKPHDKLSRILPGEQALNVSTVKMLAGREFNYSGRGKFSSADCRHVLSRYLPVYGP 685
T L + PH + SR +PG L VSTV+MLAGRE N+SGRG+FS+ADC H+LSRYLP GP
Sbjct: 60 TKLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGP 119
Query: 686 WQVDKLKTRVYVSQFSSDGSLFIAGSQGSRIKVYNVDKGWKVQKDIHAKSLRWTVTDTSL 865
W VD++ +R YVSQFS+DGSLFIAG QGSRI++YNV+KGWKVQKDI AKSLRWTVTDTSL
Sbjct: 120 WLVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSL 179
Query: 866 SPDQNYLVYASMSPIVHIVNIGSAAKESHANVTELHDGLDFSVYGDGEFSFGIFSVKFST 1045
SPDQ LVYASMSPIVHIV++GS + ESHANVTE+HDGLDFS DG +SFGIFSVKFST
Sbjct: 180 SPDQRNLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFST 239
Query: 1046 DGRELVAGSSDDSIYVYDLVANKLTLRIAAHSSDVNTVCFADETGHLIYSGSDDNLCKVW 1225
DGRE+VAGSSDDSIYVYDL AN+++LR AH+SDVNTVCFADE+G+LI SGSDDNLCKVW
Sbjct: 240 DGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVW 299
Query: 1226 DRRCFKANGKPAGVLMGHLEGITFIDSRGDGRHFISNGKDQTIKLWDIRKMSSNVSCGTK 1405
DRRCF KPAGVL+GHLEG+TFIDSRGDGR+FISNGKDQTIKLWDIRKMSS+ +
Sbjct: 300 DRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHE 359
Query: 1406 -FRNYEWDYRWMDYPPDARRLKHPGDQSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTG 1582
RNYEWDYRWMDYP +AR LKHP DQS++TY+GHSVLRTLIRCYFSPA+STGQKYIYTG
Sbjct: 360 VLRNYEWDYRWMDYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTG 419
Query: 1583 SNDGCVYIYDVVSGAQVARLEHHASTVRDCSWHPYYPMLVSCSWDGVLARCEFPGNGEK- 1759
SND VYIYD+VSG +VA L+HH+S VRDC+WHPYYP L+S SWDG L + EFPG+GE
Sbjct: 420 SNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAP 479
Query: 1760 -NRRKRLRKRY 1789
+KR+R+R+
Sbjct: 480 IMSKKRVRRRH 490
>gb|AAC79104.1| putative WD-repeat protein [Arabidopsis thaliana]
gi|7269787|emb|CAB77787.1| putative WD-repeat protein
[Arabidopsis thaliana]
Length = 555
Score = 701 bits (1809), Expect = 0.0
Identities = 339/479 (70%), Positives = 401/479 (83%), Gaps = 6/479 (1%)
Frame = +2
Query: 371 EMGFAMSRLELDPNHCDEGEPST---EAIAARMPNEPLIEMDGDIAQITNLNTKPHDKLS 541
EMG+AMSRLE++ + CD G+ + + +E L ++D +I+Q+T L + PH + S
Sbjct: 74 EMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVTKLKSSPHQRYS 133
Query: 542 RILPGEQALNVSTVKMLAGREFNYSGRGKFSSADCRHVLSRYLPVYGPWQVDKLKTRVYV 721
R +PG L VSTV+MLAGRE N+SGRG+FS+ADC H+LSRYLP GPW VD++ +R YV
Sbjct: 134 REVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPWLVDQMDSRAYV 193
Query: 722 SQFSSDGSLFIAGSQGSRIKVYNVDKGWKVQKDIHAKSLRWTVTDTSLSPDQNYLVYASM 901
SQFS+DGSLFIAG QGSRI++YNV+KGWKVQKDI AKSLRWTVTDTSLSPDQ LVYASM
Sbjct: 194 SQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQRNLVYASM 253
Query: 902 SPIVHIVNIGSAAKESHANVTELHDGLDFSVYGDGEFSFGIFSVKFSTDGRELVAGSSDD 1081
SPIVHIV++GS + ESHANVTE+HDGLDFS DG +SFGIFSVKFSTDGRE+VAGSSDD
Sbjct: 254 SPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDD 313
Query: 1082 SIYVYDLVANKLTLRIAAHSSDVNTVCFADETGHLIYSGSDDNLCKVWDRRCFKANGKPA 1261
SIYVYDL AN+++LR AH+SDVNTVCFADE+G+LI SGSDDNLCKVWDRRCF KPA
Sbjct: 314 SIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPA 373
Query: 1262 GVLMGHLEGITFIDSRGDGRHFISNGKDQTIKLWDIRKMSSNVSCGTK-FRNYEWDYRWM 1438
GVL+GHLEG+TFIDSRGDGR+FISNGKDQTIKLWDIRKMSS+ + RNYEWDYRWM
Sbjct: 374 GVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMSSSAPARHEVLRNYEWDYRWM 433
Query: 1439 DYPPDARRLKHPGDQSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSNDGCVYIYDVV 1618
DYP +AR LKHP DQS++TY+GHSVLRTLIRCYFSPA+STGQKYIYTGSND VYIYD+V
Sbjct: 434 DYPTEARDLKHPLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLV 493
Query: 1619 SGAQVARLEHHASTVRDCSWHPYYPMLVSCSWDGVLARCEFPGNGEK--NRRKRLRKRY 1789
SG +VA L+HH+S VRDC+WHPYYP L+S SWDG L + EFPG+GE +KR+R+R+
Sbjct: 494 SGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWEFPGSGEAPIMSKKRVRRRH 552