BLASTX nr result

ID: Cimicifuga21_contig00005271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005271
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO13833.1| thiazole biosynthetic protein [Camellia sinensis]       71   8e-11
ref|XP_002281769.1| PREDICTED: thiazole biosynthetic enzyme, chl...    62   6e-08
ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|1...    59   5e-07
gb|AAW66657.1| thiamine biosynthetic enzyme [Picrorhiza kurrooa]       58   7e-07

>gb|AEO13833.1| thiazole biosynthetic protein [Camellia sinensis]
          Length = 132

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = +1

Query: 22  TMASITATLLSTKPKTSFLDT-QSSFHGLPLTPSRVQVQPLRSTPQN--XXXXXXXXXYD 192
           TMA+   + LS+ PKTSFLDT QSSFHG+PL+ S +++QP++STP N           YD
Sbjct: 3   TMATTLTSSLSSNPKTSFLDTHQSSFHGVPLS-SPIRLQPIKSTPHNLSISMSASSPPYD 61

Query: 193 LTSFKFESIKESIVS 237
           L SF FE IKESIVS
Sbjct: 62  LRSFTFEPIKESIVS 76


>ref|XP_002281769.1| PREDICTED: thiazole biosynthetic enzyme, chloroplastic isoform 1
           [Vitis vinifera] gi|359494007|ref|XP_003634708.1|
           PREDICTED: thiazole biosynthetic enzyme, chloroplastic
           [Vitis vinifera] gi|378524288|sp|F6H9A9.1|THI41_VITVI
           RecName: Full=Thiamine thiazole synthase 1,
           chloroplastic; AltName: Full=Thiazole biosynthetic
           enzyme 1; Flags: Precursor
          Length = 353

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/72 (48%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +1

Query: 25  MASITATLLSTKPKTSFLDT-QSSFHGLPLTPSRVQVQPLRSTPQNXXXXXXXXXYDLTS 201
           MA++T+++ S KPK S  D  +SSFHG+P+  ++ ++ P++STP N         YDL S
Sbjct: 1   MATLTSSICS-KPKASVFDPHKSSFHGVPIA-TQARLSPVKSTPVNLAVTAAAMPYDLRS 58

Query: 202 FKFESIKESIVS 237
           FKFE IKESIVS
Sbjct: 59  FKFEPIKESIVS 70


>ref|XP_002317206.1| predicted protein [Populus trichocarpa] gi|222860271|gb|EEE97818.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/71 (46%), Positives = 42/71 (59%)
 Frame = +1

Query: 25  MASITATLLSTKPKTSFLDTQSSFHGLPLTPSRVQVQPLRSTPQNXXXXXXXXXYDLTSF 204
           MA+     LS   K+SFLD +SSFHG P+T +  +  P++ST            YDL SF
Sbjct: 1   MATTLTPYLSANLKSSFLDNKSSFHGTPIT-TTTRFTPIKSTSPAISMSLTQPSYDLQSF 59

Query: 205 KFESIKESIVS 237
           KF+ IKESIVS
Sbjct: 60  KFQPIKESIVS 70


>ref|XP_002305603.1| predicted protein [Populus trichocarpa] gi|118486164|gb|ABK94925.1|
           unknown [Populus trichocarpa]
           gi|222848567|gb|EEE86114.1| predicted protein [Populus
           trichocarpa]
          Length = 350

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/71 (47%), Positives = 43/71 (60%)
 Frame = +1

Query: 25  MASITATLLSTKPKTSFLDTQSSFHGLPLTPSRVQVQPLRSTPQNXXXXXXXXXYDLTSF 204
           MAS   + LS   K+SFLD +SSFHG P+T +  +  P++ST            YDL SF
Sbjct: 1   MASTLTSSLSINLKSSFLDHKSSFHGTPITTTG-RFTPIKSTSPAITMSLTQPSYDLQSF 59

Query: 205 KFESIKESIVS 237
           KF+ IKESIVS
Sbjct: 60  KFQPIKESIVS 70


>gb|AAW66657.1| thiamine biosynthetic enzyme [Picrorhiza kurrooa]
          Length = 354

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = +1

Query: 25  MASITATLLSTKPKTSFLDTQSSFHGLPLTPSRVQVQPLRSTPQN--XXXXXXXXXYDLT 198
           MA++ ATL S+  K+SFLDT+SS +G PL+ SR  +Q ++S+PQN           YDL 
Sbjct: 1   MAAMAATLTSSLTKSSFLDTKSSIYGSPLS-SRATIQRVKSSPQNLSVTMSAATPAYDLD 59

Query: 199 SFKFESIKESIVS 237
           +  F  IKESIVS
Sbjct: 60  NLTFAPIKESIVS 72


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