BLASTX nr result

ID: Cimicifuga21_contig00005236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005236
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853...   134   2e-29
gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]      134   2e-29
ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...   129   4e-28
ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837...   124   1e-26
ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...   122   9e-26

>ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853319|gb|EEE90866.1|
           glutaredoxin [Populus trichocarpa]
          Length = 153

 Score =  134 bits (337), Expect = 2e-29
 Identities = 75/153 (49%), Positives = 96/153 (62%), Gaps = 11/153 (7%)
 Frame = -3

Query: 631 MQQAIPYRTWAPAR-----MIKPSPV---DKNSEESATEDAAKRA---KVMVQENTVLVF 485
           MQQAIPY++W P       +I P  +     N    AT++  K +     MVQEN ++VF
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIARHNNGGVVATQEVLKGSGNMSKMVQENAIIVF 60

Query: 484 GRRGCCMCLVMKQLLLVLGVNPVACXXXXXXXXXXXXELATIGSGSGRGNKSRPQFPSVY 305
            RRGCCM LV K+LLL LGVNP               EL  I +  G+G+K + QFP+++
Sbjct: 61  ARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQFPALF 120

Query: 304 IGGKLFGDLDRLMSAHISGELKPVLKQAGALWL 206
           IGGKLFG LD+LM+AHISGEL P+LK+AGALWL
Sbjct: 121 IGGKLFGGLDKLMAAHISGELVPILKEAGALWL 153


>gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 154

 Score =  134 bits (336), Expect = 2e-29
 Identities = 75/154 (48%), Positives = 96/154 (62%), Gaps = 12/154 (7%)
 Frame = -3

Query: 631 MQQAIPYRTWAPAR-----MIKPSPV----DKNSEESATEDAAKRA---KVMVQENTVLV 488
           MQQAIPY++W P       +I P  +      N    AT++  K +     MVQEN ++V
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIAGRHSNGGVVATQEVLKGSGNMSKMVQENAIIV 60

Query: 487 FGRRGCCMCLVMKQLLLVLGVNPVACXXXXXXXXXXXXELATIGSGSGRGNKSRPQFPSV 308
           F RRGCCM LV K+LLL LGVNP               EL  I +  G+G+K + QFP++
Sbjct: 61  FARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSKKKVQFPAL 120

Query: 307 YIGGKLFGDLDRLMSAHISGELKPVLKQAGALWL 206
           +IGGKLFG LD+LM+AHISGEL P+LK+AGALWL
Sbjct: 121 FIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 154


>ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 141

 Score =  129 bits (325), Expect = 4e-28
 Identities = 72/147 (48%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
 Frame = -3

Query: 631 MQQAIPYRTWAPA----RMIKPS-PVDKNSEESATEDAAKRAKVMVQENTVLVFGRRGCC 467
           MQ+A+PY+TW P     R+  P+ P+        T +       MV EN V+VFGRRGCC
Sbjct: 1   MQEALPYKTWLPIPREPRINTPTTPLHNQLLLPGTTNITN----MVSENAVIVFGRRGCC 56

Query: 466 MCLVMKQLLLVLGVNPVACXXXXXXXXXXXXELATIGSGSGRGNKSRPQFPSVYIGGKLF 287
           M  V+K+LLL LGVNP  C            EL  +G+G G+  +   QFP+V+IGG+LF
Sbjct: 57  MTHVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMVGAGEGK--QGAVQFPAVFIGGRLF 114

Query: 286 GDLDRLMSAHISGELKPVLKQAGALWL 206
           G LDR+M+AHI+GEL P+LKQAGALWL
Sbjct: 115 GGLDRVMAAHITGELVPILKQAGALWL 141


>ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837306|gb|EEE75685.1|
           glutaredoxin [Populus trichocarpa]
          Length = 155

 Score =  124 bits (312), Expect = 1e-26
 Identities = 75/155 (48%), Positives = 94/155 (60%), Gaps = 13/155 (8%)
 Frame = -3

Query: 631 MQQAIPYRTWAPAR-----MIKPSPV---DKNSEESATEDAAKRAK---VMVQENTVLVF 485
           MQQAIPY++W P       +I PS +     N    A ++  K ++    MVQEN ++VF
Sbjct: 1   MQQAIPYKSWLPLYTNNKPLISPSQLISHHSNGGVVAAQEVLKGSRNISEMVQENAIIVF 60

Query: 484 GRRGCCMCLVMKQLLLVLGVNPVACXXXXXXXXXXXXELATIGSG-SGRGN-KSRPQFPS 311
            RRGCCM  V K+LLL LGVNP               EL  IG+   G+GN K + QFP+
Sbjct: 61  ARRGCCMSHVAKRLLLGLGVNPAVYEIDEADEISVLEELEMIGNDIGGKGNNKKKVQFPA 120

Query: 310 VYIGGKLFGDLDRLMSAHISGELKPVLKQAGALWL 206
           + IGGKLFG LD LM+ HISGEL P+LK+AGALWL
Sbjct: 121 LVIGGKLFGGLDTLMATHISGELVPILKEAGALWL 155


>ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 150

 Score =  122 bits (305), Expect = 9e-26
 Identities = 69/153 (45%), Positives = 89/153 (58%), Gaps = 11/153 (7%)
 Frame = -3

Query: 631 MQQAIPYRTWAP-----------ARMIKPSPVDKNSEESATEDAAKRAKVMVQENTVLVF 485
           M QA+PYRTW P           +  I+PS    N      +        MV EN V+VF
Sbjct: 1   MHQALPYRTWVPTTGGGSSAGPSSATIEPSDGPMNPGVGMKDVTC--VTKMVSENAVIVF 58

Query: 484 GRRGCCMCLVMKQLLLVLGVNPVACXXXXXXXXXXXXELATIGSGSGRGNKSRPQFPSVY 305
           GRRGCCMC V+ +LLL LGVNP               EL+ + +G     + RPQFP+V+
Sbjct: 59  GRRGCCMCHVVMRLLLGLGVNPTVFEVDEEDEAAVVDELSRVIAGED-AKEGRPQFPAVF 117

Query: 304 IGGKLFGDLDRLMSAHISGELKPVLKQAGALWL 206
           +GG+LFG L+R+M+ HISGEL P+LK+AGALWL
Sbjct: 118 MGGQLFGGLERVMATHISGELVPILKKAGALWL 150


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