BLASTX nr result

ID: Cimicifuga21_contig00005233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005233
         (2820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAX16990.1| MADS1 protein [Eschscholzia californica] gi|3431...   508   e-141
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...   478   e-132
ref|XP_002522456.1| mads box protein, putative [Ricinus communis...   461   e-127
ref|XP_003523016.1| PREDICTED: chlorophyll a-b binding protein P...   459   e-126
ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P...   455   e-125

>emb|CAX16990.1| MADS1 protein [Eschscholzia californica] gi|343160543|emb|CAX16991.1|
            MADS1 protein [Eschscholzia californica]
          Length = 361

 Score =  508 bits (1308), Expect = e-141
 Identities = 253/346 (73%), Positives = 292/346 (84%), Gaps = 4/346 (1%)
 Frame = -3

Query: 2614 MGRVKLKIKRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGKPTLCLGE 2435
            MGRVKLKIKRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGKPTLCLG+
Sbjct: 1    MGRVKLKIKRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGKPTLCLGD 60

Query: 2434 RSTIEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQEFLGTSTQTVEDLTNQ 2255
            RS IE+VIAKFAQLTPQERAKRKLESLEALKKTFKKL+HDVNIQ+FLGTSTQTVEDLTNQ
Sbjct: 61   RSNIEDVIAKFAQLTPQERAKRKLESLEALKKTFKKLEHDVNIQDFLGTSTQTVEDLTNQ 120

Query: 2254 SRLLEAQLSEMHKRLSCWTDPEKVNNIEHLRAMEESLKESLNRIRSHKENFGKQQLMSLE 2075
              LL+ QLSEM +RL CWTDPEK+NN++HL AME+S+KESLNRI +HKEN GKQQLMSLE
Sbjct: 121  RNLLQRQLSEMVERLRCWTDPEKINNVDHLNAMEQSIKESLNRIHTHKENLGKQQLMSLE 180

Query: 2074 CTTQFQHGMHLPLGMGGEQQAQSISWIPNNDTQHLMLSEDPNLLQQREMECSTDASVPGY 1895
            C  QFQ+GM +PLGMGGEQQ QS+SWIPN+D+QHLMLSED +LL QR++ECSTD S+  Y
Sbjct: 181  C-AQFQNGMQIPLGMGGEQQPQSLSWIPNHDSQHLMLSEDTSLLPQRDIECSTDPSLQNY 239

Query: 1894 SGYFGAGKQAEIDGSGQN--GGALHELNRNACLRLQLGGQYPYSPYGLNFLLDKNMKPEV 1721
            S Y G GKQ EID SGQ+  G +L + + NACL LQ+GGQ+PY PY  + + +   K + 
Sbjct: 240  SSYLGMGKQVEIDNSGQDGIGSSLPDFSANACLSLQIGGQFPYQPYDFDLVNNNKYKNDS 299

Query: 1720 KMNLQDPTLDYQVG--SSFEPPRHGYDTNHPSWGSNSVPCANGIFD 1589
            +M+LQ+P LDYQVG  +SF PPRH YD +  +W S S  C+  +FD
Sbjct: 300  EMSLQEPRLDYQVGNINSFGPPRHRYDASDQAWASTSGQCSVPMFD 345


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
            vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
            product [Vitis vinifera]
          Length = 375

 Score =  478 bits (1229), Expect = e-132
 Identities = 242/350 (69%), Positives = 286/350 (81%), Gaps = 7/350 (2%)
 Frame = -3

Query: 2614 MGRVKLKIKRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGKPTLCLGE 2435
            MGRVKLKIKRLE+TS RQVTYSKRR GILKKARELSILCDI+I LLMFSPTG+PTL  G 
Sbjct: 1    MGRVKLKIKRLESTSNRQVTYSKRRNGILKKARELSILCDIEIILLMFSPTGRPTLFHGA 60

Query: 2434 RSTIEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQEFLGTSTQTVEDLTNQ 2255
            RS IEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVN+Q+FLG STQT+E+LTNQ
Sbjct: 61   RSDIEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNLQDFLGASTQTIEELTNQ 120

Query: 2254 SRLLEAQLSEMHKRLSCWTDPEKVNNIEHLRAMEESLKESLNRIRSHKENFGKQQLMSLE 2075
            +RLL+AQL+E+HKRLS W++P+KV++ EHLR ME+SL+ESLNRIR HKENFGK QLMSLE
Sbjct: 121  ARLLQAQLTEVHKRLSYWSNPDKVDSTEHLRQMEDSLRESLNRIRVHKENFGKHQLMSLE 180

Query: 2074 CTTQFQHGMHLPLGMGGEQQAQSISWIPNNDTQHLMLSEDPNLLQQREMECSTDASVPGY 1895
            C +QFQ+GMHLPL M G Q+AQ +SW+PNN+ QHL+L E+P+ L QR+MECS DAS+PGY
Sbjct: 181  CASQFQNGMHLPLIMDGVQEAQPLSWLPNNENQHLILPEEPSYLPQRDMECSADASIPGY 240

Query: 1894 SGYFGAGKQAEI------DGSGQNGGALHELNRNACLRLQLGGQYPYSPYG-LNFLLDKN 1736
            SGY+  GKQ EI      D  GQ G AL++L+ N+ LRLQL  QY YSP+G LN   +K 
Sbjct: 241  SGYYSTGKQTEIGNSGQVDEQGQEGSALNQLSGNSNLRLQLSEQYLYSPFGNLNLPDEKK 300

Query: 1735 MKPEVKMNLQDPTLDYQVGSSFEPPRHGYDTNHPSWGSNSVPCANGIFDE 1586
            +KPE++MNLQ   +DYQV  +FE P   YD    +W S S PC+  +FDE
Sbjct: 301  LKPEMEMNLQGNPVDYQVNGNFEIPAPIYDNRQHTWVSASGPCSIAMFDE 350


>ref|XP_002522456.1| mads box protein, putative [Ricinus communis]
            gi|223538341|gb|EEF39948.1| mads box protein, putative
            [Ricinus communis]
          Length = 360

 Score =  461 bits (1185), Expect = e-127
 Identities = 231/346 (66%), Positives = 274/346 (79%), Gaps = 3/346 (0%)
 Frame = -3

Query: 2614 MGRVKLKIKRLENTSGRQVTYSKRRAGILKKARELSILCDIDIALLMFSPTGKPTLCLGE 2435
            MGRVKLKIK+LENT+GRQ TY KR+ GI+KKA+ELSILCDIDI LLMFSPTGKP++C G+
Sbjct: 1    MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGKPSICKGK 60

Query: 2434 RSTIEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIQEFLGTSTQTVEDLTNQ 2255
            RS IEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNI EFLGTS+QT+E+LTNQ
Sbjct: 61   RS-IEEVIAKFAQLTPQERAKRKLESLEALKKTFKKLDHDVNIPEFLGTSSQTIEELTNQ 119

Query: 2254 SRLLEAQLSEMHKRLSCWTDPEKVNNIEHLRAMEESLKESLNRIRSHKENFGKQQLMSLE 2075
             RLL++ LSE HKRLS WT P+K+N+I+HL  +E SL+ESLN+I++HKE   KQQLMSLE
Sbjct: 120  LRLLQSHLSEAHKRLSYWTCPDKINSIDHLGQLENSLRESLNQIQAHKEYIEKQQLMSLE 179

Query: 2074 CTTQFQHGMHLPLGMGGEQQAQSISWIPNNDTQHLMLSEDPNLLQQREMECSTDASVPGY 1895
            C +QFQ+GMHLP  MG EQQ   + WIPNND+Q ++L EDPNLL  R++ECS  +S   Y
Sbjct: 180  CNSQFQNGMHLPFRMGAEQQLPPMQWIPNNDSQQIVLPEDPNLLPHRDVECSASSSFGSY 239

Query: 1894 SGYFGAGKQAEIDGSGQ-NG--GALHELNRNACLRLQLGGQYPYSPYGLNFLLDKNMKPE 1724
            SGYFG GK +E+  S Q NG  G L+ELN  A LRLQL GQYP+ PY LN L D   +P 
Sbjct: 240  SGYFGTGKSSELSNSSQENGLNGILNELNGTASLRLQLAGQYPHLPYNLNMLNDTKFQPA 299

Query: 1723 VKMNLQDPTLDYQVGSSFEPPRHGYDTNHPSWGSNSVPCANGIFDE 1586
              MN+Q+  +D+ V  SFE P+ GYDT   SW S+S PCA  +FDE
Sbjct: 300  ADMNIQESPVDFHVNGSFEVPKPGYDTTPGSWASSSGPCAVTMFDE 345


>ref|XP_003523016.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  459 bits (1181), Expect = e-126
 Identities = 218/253 (86%), Positives = 230/253 (90%)
 Frame = +1

Query: 151 MAAVTTQASLAVFRPCASKSRFLSGSSGKLTQEFSVKXXXXXXXXXXFKIEAKKGEWLPG 330
           MA VTTQAS A+FRPC SKSRFL+GSSGKL +E +++          FK+EAKKGEWLPG
Sbjct: 1   MATVTTQASAAIFRPCTSKSRFLTGSSGKLNREVTMRPMGCPPSAS-FKVEAKKGEWLPG 59

Query: 331 LASPGYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTKIG 510
           LASP YLNG+LPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEV TK G
Sbjct: 60  LASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKFG 119

Query: 511 IINAPQWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPP 690
           IINAPQWYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFK YSLPP
Sbjct: 120 IINAPQWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKQYSLPP 179

Query: 691 HECGYPGSVFNPLNFAPTEEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHVAD 870
           HECGYPGSVFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH++D
Sbjct: 180 HECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSD 239

Query: 871 PWHNTIVQTFRGY 909
           PWHNTI+ T RGY
Sbjct: 240 PWHNTIINTIRGY 252


>ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  455 bits (1171), Expect = e-125
 Identities = 218/253 (86%), Positives = 230/253 (90%)
 Frame = +1

Query: 151 MAAVTTQASLAVFRPCASKSRFLSGSSGKLTQEFSVKXXXXXXXXXXFKIEAKKGEWLPG 330
           MA VTTQAS A+FRPCASKSRFL+GSSGKL +E +++          FK+EAKKGEWLPG
Sbjct: 1   MATVTTQASAAIFRPCASKSRFLTGSSGKLNREVTMRPMGCPPSAS-FKVEAKKGEWLPG 59

Query: 331 LASPGYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVLTKIG 510
           LASP YLNG+LPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEV TKIG
Sbjct: 60  LASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIG 119

Query: 511 IINAPQWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPP 690
           IINAPQWYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPG VNQDPIFK YSLP 
Sbjct: 120 IINAPQWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPQ 179

Query: 691 HECGYPGSVFNPLNFAPTEEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHVAD 870
           HECGYPGSVFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH++D
Sbjct: 180 HECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSD 239

Query: 871 PWHNTIVQTFRGY 909
           PWHNTI+ T RGY
Sbjct: 240 PWHNTIINTIRGY 252


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