BLASTX nr result
ID: Cimicifuga21_contig00005194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005194
(2131 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ... 748 0.0
gb|ABK92556.1| unknown [Populus trichocarpa] 746 0.0
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 745 0.0
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 744 0.0
ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 731 0.0
>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 616
Score = 748 bits (1931), Expect = 0.0
Identities = 393/578 (67%), Positives = 458/578 (79%), Gaps = 3/578 (0%)
Frame = -3
Query: 1973 TFEELGLDPRLIRALTKKDIS--KPTPIQRVAIPLILEGKDVVAQAKTGSGKTYAYTLPL 1800
+FEELGLDPRLIRAL KK+IS KPTPIQRVAIPLILEGKDVVA+AKTGSGKT AY LPL
Sbjct: 37 SFEELGLDPRLIRALNKKEISIRKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPL 96
Query: 1799 LQKLFSDSSSIKKTAPTAFLLVPTRELSQQVYSEVLSLIELCRVQLKVVQLTSGVPASDL 1620
LQKLFSDS S KK AP+AF+LVP+ EL QQVY EV +LI+ C+VQLK VQLTS + SDL
Sbjct: 97 LQKLFSDSGSKKKLAPSAFILVPSGELCQQVYKEVSALIDWCKVQLKAVQLTSKMSGSDL 156
Query: 1619 RATLAGPPDILVSTPACISTCISENALTTKSIQDSLSVLVLDEADLLLSYGYEDDLKTLV 1440
R +AGPPDIL+S+PA ++ C+S L + SI DSL +LVLDEADLLLS+GYEDDL+ L
Sbjct: 157 RTAIAGPPDILISSPASLAKCLSVGLLQSASINDSLEILVLDEADLLLSFGYEDDLRALT 216
Query: 1439 PHVPRRCQCLLMSATISTDIEKLKKLVLHNPVSLTLTEVGDRKDEIIPNNVQQFWISCSA 1260
+PRRCQCLLMSAT S D++KLKKL+LHNP LTL EV KDE IP NVQQFWISCS
Sbjct: 217 ALIPRRCQCLLMSATSSDDVDKLKKLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSG 276
Query: 1259 RDKXXXXXXXXXXXXXXXXXLIFVNAIDTGFRLKLFLEQFGMRSAVLNAELPQNSRLHIL 1080
RDK LIF N+ID FRL+LFLE+FG++SA+LNAELPQNSRLHIL
Sbjct: 277 RDKLVHILALLKLDLVQKKVLIFTNSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHIL 336
Query: 1079 EEFNAGLFDYLIATDDSQT-TAEQVNKEKDVSSKKTKRHLRRKLDSEFGVVRGIDFKNVY 903
EEFNAGLFDYLIATDDS+T EQ +++++ + + ++KLDSEFGVVRGIDFKNV+
Sbjct: 337 EEFNAGLFDYLIATDDSETKEKEQEQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKNVH 396
Query: 902 TVINFDMPQKVAGYVHRIGRTGRAYNTGASVSLVSSDEMEIFEEIKTTLGDNENQDSSNF 723
TV+N+DMP AGYVHRIGRTGR YN+G+SVSLVS DEMEI E++K+ LGD+EN+D SN
Sbjct: 397 TVVNYDMPLNAAGYVHRIGRTGRGYNSGSSVSLVSPDEMEILEDVKSFLGDDENKD-SNI 455
Query: 722 IAPFPLLTKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEILNSEKLKAHFQXXXXXX 543
IAPFPLLTKNAVESLRYRAEDVAKSVTK+AV+E+RAQDLRNEILNSEKLKAHF+
Sbjct: 456 IAPFPLLTKNAVESLRYRAEDVAKSVTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDL 515
Query: 542 XXXXXXXXXXXKPPPDHLRAVPEYLLDPTTQEASKIVKLARAAMGKNNSSRRQGSKRKFK 363
PP HLR VP+YL+D TT+EASK+VKLARAAMGKNN SRRQGSK+KF
Sbjct: 516 DLLKHDKVLSKNPPAPHLRDVPDYLMDATTKEASKMVKLARAAMGKNNPSRRQGSKKKFI 575
Query: 362 KSRDPSKTSSTEAPKRSLKGGIKRNRGEKGDDGRKNIK 249
KS+DP K S +APK+S KGG+KR R + GD K+ K
Sbjct: 576 KSKDPLKALSFQAPKKSDKGGMKRER-KDGDSTHKHKK 612
>gb|ABK92556.1| unknown [Populus trichocarpa]
Length = 619
Score = 746 bits (1927), Expect = 0.0
Identities = 397/581 (68%), Positives = 458/581 (78%), Gaps = 4/581 (0%)
Frame = -3
Query: 1976 QTFEELGLDPRLIRALTKKDIS--KPTPIQRVAIPLILEGKDVVAQAKTGSGKTYAYTLP 1803
Q+FEELGLDPRLIRAL KK+IS +PTPIQR AIPLIL+GKDVVA+AKTGSGKT AY LP
Sbjct: 38 QSFEELGLDPRLIRALNKKEISIAEPTPIQRAAIPLILQGKDVVARAKTGSGKTLAYLLP 97
Query: 1802 LLQKLFSDS-SSIKKTAPTAFLLVPTRELSQQVYSEVLSLIELCRVQLKVVQLTSGVPAS 1626
LLQKL S + S+ KK +P+AF+LVP+ EL QQVY EV SLI+ C+ QLKVVQLTS +PAS
Sbjct: 98 LLQKLLSTADSNRKKLSPSAFILVPSGELCQQVYKEVSSLIDSCKAQLKVVQLTSNMPAS 157
Query: 1625 DLRATLAGPPDILVSTPACISTCISENALTTKSIQDSLSVLVLDEADLLLSYGYEDDLKT 1446
DLR LAGPPDILVSTP+C++ +S L ++SI DSL +LVLDEADLLLS+GYE+DLK
Sbjct: 158 DLRNALAGPPDILVSTPSCVAKSLSVGVLKSESINDSLEILVLDEADLLLSFGYEEDLKA 217
Query: 1445 LVPHVPRRCQCLLMSATISTDIEKLKKLVLHNPVSLTLTEVGDRKDEIIPNNVQQFWISC 1266
L VPRRCQCLLMSAT S D++KLKKLVLHNP LTL EV KDE+IP NVQQFW+SC
Sbjct: 218 LTALVPRRCQCLLMSATSSADVDKLKKLVLHNPYVLTLPEVEGVKDEVIPKNVQQFWVSC 277
Query: 1265 SARDKXXXXXXXXXXXXXXXXXLIFVNAIDTGFRLKLFLEQFGMRSAVLNAELPQNSRLH 1086
RDK LIF NAID FRLKLFLE+FG++SAVLNAELPQNSRLH
Sbjct: 278 GDRDKLVHILALLKLDLVQKKVLIFTNAIDMSFRLKLFLEKFGIKSAVLNAELPQNSRLH 337
Query: 1085 ILEEFNAGLFDYLIATDDSQT-TAEQVNKEKDVSSKKTKRHLRRKLDSEFGVVRGIDFKN 909
ILEEFNAGLFDYLIATDD +T E+ N+ ++K+K+H ++KLDSEFGVVRGIDFKN
Sbjct: 338 ILEEFNAGLFDYLIATDDRETKEKEKANEGSLAETRKSKKHAKQKLDSEFGVVRGIDFKN 397
Query: 908 VYTVINFDMPQKVAGYVHRIGRTGRAYNTGASVSLVSSDEMEIFEEIKTTLGDNENQDSS 729
V+TVIN+DMP GYVHRIGRTGRAY+TG+SVSLVS DEMEI EEIK+ LGD+EN + S
Sbjct: 398 VHTVINYDMPLSATGYVHRIGRTGRAYSTGSSVSLVSPDEMEILEEIKSFLGDDENNE-S 456
Query: 728 NFIAPFPLLTKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEILNSEKLKAHFQXXXX 549
N I+P+PLLTKNAVESLRYRAED AKSVTK+AVRE+RAQDLRNEILNSEKLKAHF+
Sbjct: 457 NVISPYPLLTKNAVESLRYRAEDTAKSVTKIAVREARAQDLRNEILNSEKLKAHFEVNPR 516
Query: 548 XXXXXXXXXXXXXKPPPDHLRAVPEYLLDPTTQEASKIVKLARAAMGKNNSSRRQGSKRK 369
KPP HL VP+YLLD TT+EASK+VKLARAAMG NNS RRQG KR
Sbjct: 517 DLDLLKHDKVLSKKPPAPHLSDVPDYLLDATTKEASKMVKLARAAMGNNNSGRRQGPKRN 576
Query: 368 FKKSRDPSKTSSTEAPKRSLKGGIKRNRGEKGDDGRKNIKK 246
F+KS+DP K+ S E P+R KGG+KR G+ GDD K+ KK
Sbjct: 577 FRKSKDPLKSFSAEGPRRGRKGGMKR-EGKDGDDTHKHKKK 616
>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
vinifera]
Length = 545
Score = 745 bits (1924), Expect = 0.0
Identities = 392/544 (72%), Positives = 435/544 (79%), Gaps = 1/544 (0%)
Frame = -3
Query: 1868 EGKDVVAQAKTGSGKTYAYTLPLLQKLFSDSSSIKKTAPTAFLLVPTRELSQQVYSEVLS 1689
EGKDVVA+AKTGSGKT+AY LPLLQKLFS+S S K AP+AF+LVPTREL QQVYSEVLS
Sbjct: 3 EGKDVVARAKTGSGKTFAYLLPLLQKLFSESESRNKLAPSAFVLVPTRELCQQVYSEVLS 62
Query: 1688 LIELCRVQLKVVQLTSGVPASDLRATLAGPPDILVSTPACISTCISENALTTKSIQDSLS 1509
LIELCR QLKVVQLTS + SDLR LAGPPDILVSTP CI C+S L SI +SL
Sbjct: 63 LIELCRGQLKVVQLTSSMSPSDLRVALAGPPDILVSTPGCIPKCLSAGVLQAASINESLE 122
Query: 1508 VLVLDEADLLLSYGYEDDLKTLVPHVPRRCQCLLMSATISTDIEKLKKLVLHNPVSLTLT 1329
+LVLDEADLLLSYGYEDDLK L HVPRRCQCLLMSAT S D+EKLKKL+LHNP LTL
Sbjct: 123 ILVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSATSSADVEKLKKLILHNPFILTLP 182
Query: 1328 EVGDRKDEIIPNNVQQFWISCSARDKXXXXXXXXXXXXXXXXXLIFVNAIDTGFRLKLFL 1149
EVGD KDEIIP NVQQFWISCSARDK LIF N+ID FRLKLFL
Sbjct: 183 EVGDGKDEIIPKNVQQFWISCSARDKLLYILALLKLELVQKKILIFTNSIDMAFRLKLFL 242
Query: 1148 EQFGMRSAVLNAELPQNSRLHILEEFNAGLFDYLIATDDSQ-TTAEQVNKEKDVSSKKTK 972
E+FG++SAVLNAELPQNSRLHILEEFNAGLFDYLIATD SQ EQ ++ + +K++
Sbjct: 243 EKFGIKSAVLNAELPQNSRLHILEEFNAGLFDYLIATDGSQPKEKEQADEGSQIEPRKSR 302
Query: 971 RHLRRKLDSEFGVVRGIDFKNVYTVINFDMPQKVAGYVHRIGRTGRAYNTGASVSLVSSD 792
+H ++KLDSEFGVVRGIDFKNV+TVINF+MPQ GYVHRIGRTGRAYNTGASVSLVS D
Sbjct: 303 KHSKQKLDSEFGVVRGIDFKNVHTVINFEMPQNAPGYVHRIGRTGRAYNTGASVSLVSPD 362
Query: 791 EMEIFEEIKTTLGDNENQDSSNFIAPFPLLTKNAVESLRYRAEDVAKSVTKVAVRESRAQ 612
EMEI EEIK+ LGD+EN++ SNFIAPFPLLTKNAVESLRYRAEDV+KSVTK+AVRESRAQ
Sbjct: 363 EMEILEEIKSILGDDENKE-SNFIAPFPLLTKNAVESLRYRAEDVSKSVTKLAVRESRAQ 421
Query: 611 DLRNEILNSEKLKAHFQXXXXXXXXXXXXXXXXXKPPPDHLRAVPEYLLDPTTQEASKIV 432
DLRNEI+NSEKLKAHF+ KP P HLR VP+YLLDPTTQEASKIV
Sbjct: 422 DLRNEIVNSEKLKAHFEVNQRDLDLLKHDKVLSKKPIPTHLRDVPDYLLDPTTQEASKIV 481
Query: 431 KLARAAMGKNNSSRRQGSKRKFKKSRDPSKTSSTEAPKRSLKGGIKRNRGEKGDDGRKNI 252
KLARAAMG N +RRQGS+RKF+KSRDP KT S EAPK++ KGG+KR + D +
Sbjct: 482 KLARAAMGNTNPARRQGSRRKFRKSRDPLKTFSAEAPKKASKGGMKRKEKDNDDSHKHKK 541
Query: 251 KKAI 240
KKAI
Sbjct: 542 KKAI 545
>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
sativus]
Length = 596
Score = 744 bits (1921), Expect = 0.0
Identities = 386/576 (67%), Positives = 447/576 (77%)
Frame = -3
Query: 1973 TFEELGLDPRLIRALTKKDISKPTPIQRVAIPLILEGKDVVAQAKTGSGKTYAYTLPLLQ 1794
+FEELGLDPRL+RAL KK+I KPTPIQ VAIPLILEGKDVVA+AKTGSGKT+AY LPLLQ
Sbjct: 22 SFEELGLDPRLVRALIKKEIQKPTPIQHVAIPLILEGKDVVARAKTGSGKTFAYLLPLLQ 81
Query: 1793 KLFSDSSSIKKTAPTAFLLVPTRELSQQVYSEVLSLIELCRVQLKVVQLTSGVPASDLRA 1614
KLF+ SS+ KK+ P+A +LVPTRELSQQVY E+ SLIE CRVQ+KV QLTS + SDLR
Sbjct: 82 KLFTGSSTKKKSGPSAVVLVPTRELSQQVYKEISSLIETCRVQVKVAQLTSSMSHSDLRT 141
Query: 1613 TLAGPPDILVSTPACISTCISENALTTKSIQDSLSVLVLDEADLLLSYGYEDDLKTLVPH 1434
LAGPPDI+V+TPACI C+S L SI +SL +LVLDEADLLLSYGYEDD+K H
Sbjct: 142 ALAGPPDIIVATPACIPKCLSAGVLQPTSINESLEILVLDEADLLLSYGYEDDIKAFAAH 201
Query: 1433 VPRRCQCLLMSATISTDIEKLKKLVLHNPVSLTLTEVGDRKDEIIPNNVQQFWISCSARD 1254
VPR CQCLLMSAT S D+EKLKKL+LHNP LTL EVGD KD++IP NVQQF ISC ARD
Sbjct: 202 VPRSCQCLLMSATSSEDVEKLKKLILHNPFILTLPEVGDVKDDLIPKNVQQFSISCDARD 261
Query: 1253 KXXXXXXXXXXXXXXXXXLIFVNAIDTGFRLKLFLEQFGMRSAVLNAELPQNSRLHILEE 1074
K LIF N+ID GFRLKLFLE+FG++SA+LNAELPQNSRLHILEE
Sbjct: 262 KLLHILSLLKLDLVQKKVLIFTNSIDMGFRLKLFLEKFGIKSAILNAELPQNSRLHILEE 321
Query: 1073 FNAGLFDYLIATDDSQTTAEQVNKEKDVSSKKTKRHLRRKLDSEFGVVRGIDFKNVYTVI 894
FNAGLFDYLIATDDSQT ++ N+E +V +K+++ ++K+DSEFGVVRGIDFKNVYTVI
Sbjct: 322 FNAGLFDYLIATDDSQTKEKEANEEGNVDKRKSRKRAKQKIDSEFGVVRGIDFKNVYTVI 381
Query: 893 NFDMPQKVAGYVHRIGRTGRAYNTGASVSLVSSDEMEIFEEIKTTLGDNENQDSSNFIAP 714
NF++P +GY+HRIGRTGRAYNTGAS+SLVS DEM+ FEEI++ L + + D I P
Sbjct: 382 NFELPPSASGYIHRIGRTGRAYNTGASISLVSPDEMDNFEEIQSFLRADGDTD---IIVP 438
Query: 713 FPLLTKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEILNSEKLKAHFQXXXXXXXXX 534
FPLLTKNAVESLRYRAEDV+KSVTK+A+RESRA DLRNEILNSEKLKAHF+
Sbjct: 439 FPLLTKNAVESLRYRAEDVSKSVTKLAIRESRALDLRNEILNSEKLKAHFESNPKDLDLL 498
Query: 533 XXXXXXXXKPPPDHLRAVPEYLLDPTTQEASKIVKLARAAMGKNNSSRRQGSKRKFKKSR 354
PP HLR VP+YL+DP TQEASKI+KLARAAMG S RR+G KRK + +
Sbjct: 499 KHDKILSKNPPAPHLRDVPDYLVDPVTQEASKIIKLARAAMGNVQSGRRRGFKRKSRNDK 558
Query: 353 DPSKTSSTEAPKRSLKGGIKRNRGEKGDDGRKNIKK 246
DP KT S E PKRS +GG NR +K DD KK
Sbjct: 559 DPLKTFSAEGPKRSRRGG--GNREDKNDDQNNRRKK 592
>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine max]
Length = 601
Score = 731 bits (1887), Expect = 0.0
Identities = 389/564 (68%), Positives = 444/564 (78%), Gaps = 5/564 (0%)
Frame = -3
Query: 1976 QTFEELGLDPRLIRALTKKDISKPTPIQRVAIPLILEGKDVVAQAKTGSGKTYAYTLPLL 1797
Q+FEELG+D RL+RAL KK I KPTPIQRVAIPLILEGKDVVA+AKTGSGKT AY LPLL
Sbjct: 22 QSFEELGVDARLLRALIKKRIEKPTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLL 81
Query: 1796 QKLFSDSSSIKKTAPTAFLLVPTRELSQQVYSEVLSLIELCRVQLKVVQLTSGVPASDLR 1617
QKLF+ +S KK AP AF+LVPTRELSQQVY+EV SL+ELCRVQLKVVQL S + A+DLR
Sbjct: 82 QKLFTANSDRKKLAPNAFVLVPTRELSQQVYAEVKSLVELCRVQLKVVQLNSNMLANDLR 141
Query: 1616 ATLAGPPDILVSTPACISTCISENALTTKSIQDSLSVLVLDEADLLLSYGYEDDLKTLVP 1437
A LAGPPDIL+STPAC++ C+S L SI SL LVLDEADLLLSYGYE+D+K L P
Sbjct: 142 AALAGPPDILISTPACVAKCLSCGVLQAASINASLETLVLDEADLLLSYGYENDIKALTP 201
Query: 1436 HVPRRCQCLLMSATISTDIEKLKKLVLHNPVSLTLTEVGDRKDEIIPNNVQQFWISCSAR 1257
HVPR CQCLLMSAT S D++KLKKL+LHNP LTL EVG+ KDE+IP NVQQFWISC A
Sbjct: 202 HVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNHKDEVIPKNVQQFWISCPAS 261
Query: 1256 DKXXXXXXXXXXXXXXXXXLIFVNAIDTGFRLKLFLEQFGMRSAVLNAELPQNSRLHILE 1077
DK LIF N ID FRLKLFLE+FG+RSAVLN ELPQNSRLHILE
Sbjct: 262 DKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILE 321
Query: 1076 EFNAGLFDYLIATDDSQT-TAEQVNKEKDVSSKKTKRHLRRKLDSEFGVVRGIDFKNVYT 900
EFNAGLFDYLIATD SQ+ ++V KE V S+K+++H + KLDSEFGVVRGIDFKNVYT
Sbjct: 322 EFNAGLFDYLIATDLSQSKEKDEVPKESIVGSRKSRKHAKIKLDSEFGVVRGIDFKNVYT 381
Query: 899 VINFDMPQKVAGYVHRIGRTGRAYNTGASVSLVSSDEMEIFEEIKTTLGDNENQDSSNFI 720
VINF+MPQ VAGYVHRIGRTGRAYN+GASVSLVS+DEM+ EEI++ +GD+EN+ +N I
Sbjct: 382 VINFEMPQSVAGYVHRIGRTGRAYNSGASVSLVSTDEMDTLEEIRSFVGDDENK-GTNSI 440
Query: 719 APFPLLTKNAVESLRYRAEDVAKSVTKVAVRESRAQDLRNEILNSEKLKAHFQXXXXXXX 540
A FPLLTKNAVESLRYRAEDVAKSVT++AVRESRAQDLRNEILNSEKLK HF+
Sbjct: 441 AEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKTHFETNPKDLD 500
Query: 539 XXXXXXXXXXKPPPDHLRAVPEYLLDPTTQEASKIVKLARAAMGKNNSSRRQGSKRKFKK 360
PP HLR VPEYLLD T+EA ++VKLAR AMG NN RR+GSKRK +K
Sbjct: 501 LLKHDKILSKNAPPPHLRDVPEYLLDKPTKEAREMVKLARDAMGNNN--RRKGSKRKLRK 558
Query: 359 SRDPSK----TSSTEAPKRSLKGG 300
DP K T+S++ P ++ K G
Sbjct: 559 EGDPLKAIYATASSKRPHKARKTG 582