BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005160
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   218   2e-77
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   198   8e-73
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   196   2e-72
ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...   199   3e-71
ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-70

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score =  218 bits (554), Expect(2) = 2e-77
 Identities = 102/123 (82%), Positives = 114/123 (92%)
 Frame = +3

Query: 234 GGISMEELHRLIYAQVLSSHTLTWQISPVYLASCRKQGMGLLEILLYKQPVRHNQLLLKV 413
           GGIS+EELHRLIYAQVLSSH LTWQI+P+YL SC KQGMGLLE+LLYKQPV+ NQ+LLK 
Sbjct: 453 GGISIEELHRLIYAQVLSSHALTWQIAPIYLTSCMKQGMGLLEVLLYKQPVQDNQMLLKT 512

Query: 414 LEICRLYELSSISSNIMKIAGVYHWKHGRKGSGIFWLQQAQDEVRLNKIAQQLFDFVGKP 593
            EICRLY+L SISS+IMKIAGVYHWKHGRKGSG+FWLQQA+DE RLN+IAQQLFDFVG+ 
Sbjct: 513 TEICRLYDLESISSSIMKIAGVYHWKHGRKGSGVFWLQQARDEFRLNRIAQQLFDFVGRS 572

Query: 594 ISD 602
           ISD
Sbjct: 573 ISD 575



 Score = 97.8 bits (242), Expect(2) = 2e-77
 Identities = 50/78 (64%), Positives = 56/78 (71%)
 Frame = +2

Query: 2   GLEGMYSLAQKCLQLKPLSXXXXXXXXXXXXXXXXXEVVLAECSRAFGPWMVAHAIELLT 181
           GLE M++LAQKC+QLKP+S                 EVVLAECSRAFGPWMVAHAIELLT
Sbjct: 376 GLESMHALAQKCIQLKPISSSHRLMGLIVGILGENTEVVLAECSRAFGPWMVAHAIELLT 435

Query: 182 AGNTQAEILLNEERYNLG 235
           AG+ QAEI+L E R NLG
Sbjct: 436 AGSDQAEIILQEGRDNLG 453


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
           gi|223544326|gb|EEF45847.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 725

 Score =  198 bits (504), Expect(2) = 8e-73
 Identities = 93/123 (75%), Positives = 111/123 (90%)
 Frame = +3

Query: 234 GGISMEELHRLIYAQVLSSHTLTWQISPVYLASCRKQGMGLLEILLYKQPVRHNQLLLKV 413
           GGIS+ ELH+L+YAQVLSSH LTWQI+P+YL SC KQGMGLLE LLY+QPV++N+LL+K 
Sbjct: 462 GGISIGELHQLVYAQVLSSHILTWQIAPIYLISCIKQGMGLLESLLYRQPVQYNELLIKN 521

Query: 414 LEICRLYELSSISSNIMKIAGVYHWKHGRKGSGIFWLQQAQDEVRLNKIAQQLFDFVGKP 593
           LEICRL EL S+S +IMKIAGVYHWKHG+KGSG++WL+QA+DEV LN+IAQQLFD VGK 
Sbjct: 522 LEICRLNELDSVSRDIMKIAGVYHWKHGKKGSGVYWLRQARDEVSLNRIAQQLFDSVGKS 581

Query: 594 ISD 602
           ISD
Sbjct: 582 ISD 584



 Score =  101 bits (251), Expect(2) = 8e-73
 Identities = 51/78 (65%), Positives = 55/78 (70%)
 Frame = +2

Query: 2   GLEGMYSLAQKCLQLKPLSXXXXXXXXXXXXXXXXXEVVLAECSRAFGPWMVAHAIELLT 181
           GLE MYSLAQKC+QLKP S                 EV+LAECSR FGPWMV HAIELLT
Sbjct: 385 GLESMYSLAQKCIQLKPTSSPHKLMQLILGILGENTEVILAECSRGFGPWMVTHAIELLT 444

Query: 182 AGNTQAEILLNEERYNLG 235
           AG+ QAE+LLNEER NLG
Sbjct: 445 AGSVQAEMLLNEERDNLG 462


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  196 bits (499), Expect(2) = 2e-72
 Identities = 93/123 (75%), Positives = 106/123 (86%)
 Frame = +3

Query: 234 GGISMEELHRLIYAQVLSSHTLTWQISPVYLASCRKQGMGLLEILLYKQPVRHNQLLLKV 413
           GGIS+ ELHRL+YAQ+LSSH LTWQI+P+YL SC KQGMGLLE LLY+Q  +HN +LLK 
Sbjct: 436 GGISIVELHRLVYAQILSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSAQHNDVLLKN 495

Query: 414 LEICRLYELSSISSNIMKIAGVYHWKHGRKGSGIFWLQQAQDEVRLNKIAQQLFDFVGKP 593
           +EICRLYEL  ISSNIMKIAGV+HWKHG KG+G+FWLQQAQD   L+KIAQQLFD VGK 
Sbjct: 496 IEICRLYELDHISSNIMKIAGVHHWKHGHKGAGVFWLQQAQDASCLDKIAQQLFDSVGKS 555

Query: 594 ISD 602
           ISD
Sbjct: 556 ISD 558



 Score =  102 bits (253), Expect(2) = 2e-72
 Identities = 51/78 (65%), Positives = 57/78 (73%)
 Frame = +2

Query: 2   GLEGMYSLAQKCLQLKPLSXXXXXXXXXXXXXXXXXEVVLAECSRAFGPWMVAHAIELLT 181
           G+E MY+LAQKC+QLKP S                 EVVLAECSR FGPW+VAHAIELLT
Sbjct: 359 GIESMYNLAQKCIQLKPRSSTHRLSVLMIGILEENTEVVLAECSREFGPWLVAHAIELLT 418

Query: 182 AGNTQAEILLNEERYNLG 235
           AG+ QAEILL+EERYNLG
Sbjct: 419 AGSEQAEILLHEERYNLG 436


>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
           gi|355477434|gb|AES58637.1| Nuclear pore complex protein
           Nup85 [Medicago truncatula]
          Length = 919

 Score =  199 bits (507), Expect(2) = 3e-71
 Identities = 95/123 (77%), Positives = 107/123 (86%)
 Frame = +3

Query: 234 GGISMEELHRLIYAQVLSSHTLTWQISPVYLASCRKQGMGLLEILLYKQPVRHNQLLLKV 413
           GGISM ELHRL YAQVLSSH LTWQI+P+YL SC KQGMGLLE LLY+Q V+HN +LLK 
Sbjct: 485 GGISMVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSVQHNNMLLKN 544

Query: 414 LEICRLYELSSISSNIMKIAGVYHWKHGRKGSGIFWLQQAQDEVRLNKIAQQLFDFVGKP 593
           +EICRLYEL  ISSNIMK+AGVYHWKHGRKG+G+FWLQQ+QD   L++IAQQLFD VGK 
Sbjct: 545 IEICRLYELDHISSNIMKVAGVYHWKHGRKGAGVFWLQQSQDTNCLDRIAQQLFDSVGKS 604

Query: 594 ISD 602
           ISD
Sbjct: 605 ISD 607



 Score = 94.7 bits (234), Expect(2) = 3e-71
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = +2

Query: 2   GLEGMYSLAQKCLQLKPLSXXXXXXXXXXXXXXXXXEVVLAECSRAFGPWMVAHAIELLT 181
           G+E MY+LAQKC+QLKP +                 EVVLAE SR FGPWMVAHA+ELLT
Sbjct: 408 GVESMYNLAQKCIQLKPPTGTHRLTGLLIGILGENTEVVLAEISREFGPWMVAHAVELLT 467

Query: 182 AGNTQAEILLNEERYNLG 235
           AG+ QAEILL +ERYNLG
Sbjct: 468 AGSEQAEILLYDERYNLG 485


>ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|222865653|gb|EEF02784.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  207 bits (527), Expect(2) = 2e-70
 Identities = 98/122 (80%), Positives = 109/122 (89%)
 Frame = +3

Query: 234 GGISMEELHRLIYAQVLSSHTLTWQISPVYLASCRKQGMGLLEILLYKQPVRHNQLLLKV 413
           GGISMEELHRL+YAQVL+SH LTWQI+PVYL SC +QGM LLE+LLY+QP +HNQLLLK 
Sbjct: 457 GGISMEELHRLVYAQVLTSHFLTWQIAPVYLTSCMRQGMSLLEVLLYRQPAQHNQLLLKN 516

Query: 414 LEICRLYELSSISSNIMKIAGVYHWKHGRKGSGIFWLQQAQDEVRLNKIAQQLFDFVGKP 593
           LEICRLYEL  +SSNIMKIAGVYHWKHGRKG G+FWLQQA+DE  LNKIAQ+LFD VGK 
Sbjct: 517 LEICRLYELDHVSSNIMKIAGVYHWKHGRKGLGVFWLQQARDEFLLNKIAQRLFDSVGKS 576

Query: 594 IS 599
           IS
Sbjct: 577 IS 578



 Score = 84.3 bits (207), Expect(2) = 2e-70
 Identities = 41/78 (52%), Positives = 52/78 (66%)
 Frame = +2

Query: 2   GLEGMYSLAQKCLQLKPLSXXXXXXXXXXXXXXXXXEVVLAECSRAFGPWMVAHAIELLT 181
           G E MY+LAQKC+++KP+S                 EVVLAECSR FGPWMV HAIELLT
Sbjct: 380 GFESMYNLAQKCVKMKPMSSPHKLLRLIIGIIGENTEVVLAECSRGFGPWMVTHAIELLT 439

Query: 182 AGNTQAEILLNEERYNLG 235
           A + QA+ LL++E  ++G
Sbjct: 440 ARSDQADFLLHKEHDDIG 457