BLASTX nr result

ID: Cimicifuga21_contig00005149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005149
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...    92   1e-16
gb|ABK93470.1| unknown [Populus trichocarpa]                           91   3e-16
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    91   3e-16
emb|CBI17057.3| unnamed protein product [Vitis vinifera]               90   6e-16
ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    90   6e-16

>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 56/104 (53%), Positives = 60/104 (57%)
 Frame = -1

Query: 608 GGNTEPTADDIKSILGSVGADADDDRIELLLSEVKGKDITELVASGREKLXXXXXXXXXX 429
           GGNT PTA+D+K+ILGSVGADADDDRIELLLS VKGKDITEL+ASGREKL          
Sbjct: 13  GGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGREKL---ASVPSGG 69

Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 297
                                           ESDDDMGFSLFD
Sbjct: 70  GVAVSAGAAPAAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 56/104 (53%), Positives = 59/104 (56%)
 Frame = -1

Query: 608 GGNTEPTADDIKSILGSVGADADDDRIELLLSEVKGKDITELVASGREKLXXXXXXXXXX 429
           GGNT PTA+D+K ILGSVGADADDDRIELLLS VKGKDITEL+ASGREKL          
Sbjct: 13  GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL--ASVPSGGG 70

Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 297
                                           ESDDDMGFSLFD
Sbjct: 71  VAVASGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 56/104 (53%), Positives = 59/104 (56%)
 Frame = -1

Query: 608 GGNTEPTADDIKSILGSVGADADDDRIELLLSEVKGKDITELVASGREKLXXXXXXXXXX 429
           GGNT PTA+D+K ILGSVGADADDDRIELLLS VKGKDITEL+ASGREKL          
Sbjct: 13  GGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGREKL--ASVPSGGG 70

Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 297
                                           ESDDDMGFSLFD
Sbjct: 71  VAVAAGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 63/144 (43%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
 Frame = -1

Query: 695 PPVNFSRVC*CCVFVAT-----------MKXXXXXXXXXLGGNTEPTADDIKSILGSVGA 549
           P V+F+     C  +AT           MK         LGGNT P+A+D+K ILGSVGA
Sbjct: 5   PQVHFTAAPLLCKTLATQEPEGRRSHHKMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGA 64

Query: 548 DADDDRIELLLSEVKGKDITELVASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369
           +ADDDRIELLL+EVKGKDITEL+ASGREKL                              
Sbjct: 65  EADDDRIELLLAEVKGKDITELIASGREKL---ASVPSGGGAAVAVAAPGGGGAAAPAAA 121

Query: 368 XXXXXXXXXXXXESDDDMGFSLFD 297
                       ESDDDMGFSLFD
Sbjct: 122 EPKKEEKVEEKEESDDDMGFSLFD 145


>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 55/104 (52%), Positives = 60/104 (57%)
 Frame = -1

Query: 608 GGNTEPTADDIKSILGSVGADADDDRIELLLSEVKGKDITELVASGREKLXXXXXXXXXX 429
           GGNT P+A+D+K ILGSVGA+ADDDRIELLLSEVKGKDITEL+ASGREKL          
Sbjct: 13  GGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGREKL--ASVPSGGG 70

Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 297
                                           ESDDDMGFSLFD
Sbjct: 71  VAVAATAVGGASGGGAPAAPEPKKEEKVEEKEESDDDMGFSLFD 114


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