BLASTX nr result

ID: Cimicifuga21_contig00005145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005145
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   236   1e-59
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   231   4e-58
ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   230   6e-58
ref|XP_002519976.1| GTP binding protein, putative [Ricinus commu...   229   1e-57
gb|ABK94888.1| unknown [Populus trichocarpa]                          229   2e-57

>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|296089330|emb|CBI39102.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  236 bits (602), Expect = 1e-59
 Identities = 122/201 (60%), Positives = 148/201 (73%), Gaps = 3/201 (1%)
 Frame = +3

Query: 72  MPKVYPNSVAPPPQA---RKHISDGQVQVLTVWKKSLLFNCKGFTVFDTKGCLVFRVDNY 242
           M KVYPN+ A    +   +  I  G   VLTVWKKSLLFNC GFTVFD KG LVFRVDNY
Sbjct: 1   MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 243 VASNKAKIVLMDATGIPLFTIRRKKLTLADNWELFDGETKVNPLYKVKKNVTFLNSRFLA 422
           VA NK +IVLMDA+G PL TIRRK+L+L DNW ++DGET  NP ++++K++  L+S+ LA
Sbjct: 61  VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 423 HVTSRGNKGSNKNIAYHVEGKYVQRCCKVYDEKRRVVAEIKPKETVGGVSFGLDVFHLVV 602
            V S G+  S +   Y +EG Y QRCC VYDE+RR VAEIK KE + GV+ G+DVF L+V
Sbjct: 121 RV-SGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIV 179

Query: 603 QSEMDPTVAMALVILLEQMFR 665
           Q EMD  VAMALVILL+QMFR
Sbjct: 180 QPEMDTPVAMALVILLDQMFR 200


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score =  231 bits (588), Expect = 4e-58
 Identities = 126/210 (60%), Positives = 146/210 (69%), Gaps = 11/210 (5%)
 Frame = +3

Query: 72  MPKVYPNSVAPP---PQARKHISDGQ-VQVLTVWKKSLLFNCKGFTVFDTKGCLVFRVDN 239
           M KVYPN+ A           I  G+   VLTVWKKSLLFNC GFTVFD KG LVFRVDN
Sbjct: 1   MTKVYPNATAASCGSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFRVDN 60

Query: 240 YVASNKAKIVLMDATGIPLFTIRRKKLTLADNWELFDGETKVNPLYKVKKNVTFLNSRFL 419
           YVA +K +IVLMDA+G PL TIRRK+L+L DNW ++DGET  NP ++V+K+   LNS+ L
Sbjct: 61  YVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNSKSL 120

Query: 420 AHVTSRGNKG-------SNKNIAYHVEGKYVQRCCKVYDEKRRVVAEIKPKETVGGVSFG 578
           A V+  G  G       S +N  Y +EG Y QRCC VYDE RR VAEIK KE V GV+ G
Sbjct: 121 ARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGVALG 180

Query: 579 LDVFHLVVQSEMDPTVAMALVILLEQMFRS 668
           +DVF LVVQ EMD  VAMALVILL+QMF S
Sbjct: 181 VDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  230 bits (587), Expect = 6e-58
 Identities = 122/210 (58%), Positives = 150/210 (71%), Gaps = 13/210 (6%)
 Frame = +3

Query: 72  MPKVYPNSVAPPPQARKH-----------ISDGQVQVLTVWKKSLLFNCKGFTVFDTKGC 218
           M KVYPN VAP    +K            +      VLTVWKKSLLFNC GFTV+D +G 
Sbjct: 1   MTKVYPN-VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGN 59

Query: 219 LVFRVDNYVAS--NKAKIVLMDATGIPLFTIRRKKLTLADNWELFDGETKVNPLYKVKKN 392
           LVFRVDNY+A+  N  +IVLMDA G PL TIRRK+L+L DNW +++GET  NP + VKK+
Sbjct: 60  LVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKH 119

Query: 393 VTFLNSRFLAHVTSRGNKGSNKNIAYHVEGKYVQRCCKVYDEKRRVVAEIKPKETVGGVS 572
           V  LN++ LAHV+     GSNKN+ Y +EG Y QRCC VYDEK+R VAEIK KE+VGGV+
Sbjct: 120 VNILNTKCLAHVSPAS--GSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVA 177

Query: 573 FGLDVFHLVVQSEMDPTVAMALVILLEQMF 662
           FG+DVF L+V  EM  ++AMA+VILL+QMF
Sbjct: 178 FGVDVFRLIVGPEMGTSMAMAMVILLDQMF 207


>ref|XP_002519976.1| GTP binding protein, putative [Ricinus communis]
           gi|223540740|gb|EEF42300.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 215

 Score =  229 bits (584), Expect = 1e-57
 Identities = 122/209 (58%), Positives = 150/209 (71%), Gaps = 10/209 (4%)
 Frame = +3

Query: 72  MPKVYPN-SVAPPPQARK----HISDGQVQVLTVWKKSLLFNCKGFTVFDTKGCLVFRVD 236
           M KVYPN + A  P   K     +      VLTVWKKSLLFNC GFTV+D  G LVFRVD
Sbjct: 1   MTKVYPNIAAASTPVVEKLKSSSLDTADAIVLTVWKKSLLFNCNGFTVYDGSGNLVFRVD 60

Query: 237 NYVASNKA--KIVLMDATGIPLFTIRRKKLTLADNWELFDGETKVNPLYKVKKNVTFLNS 410
           NY+A + A  +IVLMDA G PL TIRRK+L+L DNW ++DGET VNPL+ V+K+V  LN+
Sbjct: 61  NYMAGSGANGEIVLMDADGKPLLTIRRKRLSLGDNWLVYDGETAVNPLFSVRKHVKILNT 120

Query: 411 RFLAHVTSRGNKGS---NKNIAYHVEGKYVQRCCKVYDEKRRVVAEIKPKETVGGVSFGL 581
           + LAHV+   + GS   +KNI Y +EG Y QR C VYD+K R VAEIK KE VGGV+FG+
Sbjct: 121 KSLAHVSGNSSSGSTSNSKNIVYEIEGSYSQRSCAVYDDKHRRVAEIKQKEAVGGVAFGV 180

Query: 582 DVFHLVVQSEMDPTVAMALVILLEQMFRS 668
           DVF L++  +MD +VAMA+VILL+QMF S
Sbjct: 181 DVFRLIIGPKMDTSVAMAIVILLDQMFGS 209


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  229 bits (583), Expect = 2e-57
 Identities = 121/215 (56%), Positives = 152/215 (70%), Gaps = 16/215 (7%)
 Frame = +3

Query: 72  MPKVYPNSVAPPPQARKH--------------ISDGQVQVLTVWKKSLLFNCKGFTVFDT 209
           M KVYPN VAP   A                 +      VLTVWKKSLLFNC GFTVFD+
Sbjct: 1   MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 210 KGCLVFRVDNYVASN--KAKIVLMDATGIPLFTIRRKKLTLADNWELFDGETKVNPLYKV 383
           KG L+FRVDNY+A++    +IVLMDA G PL T+RRK+L+L D+W ++DGET +NP + V
Sbjct: 60  KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 384 KKNVTFLNSRFLAHVTSRGNKGSNKNIAYHVEGKYVQRCCKVYDEKRRVVAEIKPKETVG 563
           KK+V+ LN + LAHV+     GSNKN+ Y +EG Y QRCC VYDEK+R VAEIK KE VG
Sbjct: 120 KKHVSILNKKCLAHVSQAA--GSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVG 177

Query: 564 GVSFGLDVFHLVVQSEMDPTVAMALVILLEQMFRS 668
           GV+FG+DVF L+V  E+D ++AMA+VI+L+QMF S
Sbjct: 178 GVAFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


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