BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005136
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|2...   194   8e-48
ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thal...   194   8e-48
ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   193   1e-47
ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   193   1e-47
ref|XP_002525197.1| meiotic recombination protein spo11, putativ...   193   2e-47

>ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|222833522|gb|EEE71999.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  194 bits (493), Expect = 8e-48
 Identities = 91/96 (94%), Positives = 96/96 (100%)
 Frame = +1

Query: 232 SNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSL 411
           +NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKKNPGWVEELSL
Sbjct: 328 ANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSL 387

Query: 412 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWV 519
           MVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDW+
Sbjct: 388 MVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 423



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATR 134
           QSDALFILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDVATR
Sbjct: 242 QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR 285


>ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
           gi|297806215|ref|XP_002870991.1| hypothetical protein
           ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata]
           gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA
           topoisomerase 6 subunit A; Short=AtTOP6A; AltName:
           Full=Meiotic recombination protein SPO11-3;
           Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
           INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
           gi|15488539|gb|AAL01152.1|AF323679_1 putative
           topoisomerase VI subunit A [Arabidopsis thaliana]
           gi|7413557|emb|CAB86036.1| meiosis specific-like protein
           [Arabidopsis thaliana] gi|12331186|emb|CAC24689.1|
           topoisomerase 6 subunit A [Arabidopsis thaliana]
           gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis
           thaliana] gi|297316828|gb|EFH47250.1| hypothetical
           protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
           lyrata] gi|332003139|gb|AED90522.1| DNA topoisomerase 6
           subunit A [Arabidopsis thaliana]
          Length = 427

 Score =  194 bits (493), Expect = 8e-48
 Identities = 91/96 (94%), Positives = 96/96 (100%)
 Frame = +1

Query: 232 SNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSL 411
           +NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEEL+L
Sbjct: 332 ANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNL 391

Query: 412 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWV 519
           MVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDW+
Sbjct: 392 MVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 427



 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATR 134
           QSDA+FILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDVATR
Sbjct: 246 QSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR 289


>ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 417

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/96 (94%), Positives = 96/96 (100%)
 Frame = +1

Query: 232 SNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSL 411
           +NLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL+L
Sbjct: 322 ANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTL 381

Query: 412 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWV 519
           MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQ+DW+
Sbjct: 382 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQKDWL 417



 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATR 134
           QSDALFILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDV+TR
Sbjct: 236 QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTR 279


>ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 419

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/96 (94%), Positives = 96/96 (100%)
 Frame = +1

Query: 232 SNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSL 411
           +NLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL+L
Sbjct: 324 ANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTL 383

Query: 412 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWV 519
           MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQ+DW+
Sbjct: 384 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQKDWL 419



 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 42/44 (95%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATR 134
           QSDALFILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDV+TR
Sbjct: 238 QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTR 281


>ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
           gi|223535494|gb|EEF37163.1| meiotic recombination
           protein spo11, putative [Ricinus communis]
          Length = 421

 Score =  193 bits (490), Expect = 2e-47
 Identities = 90/96 (93%), Positives = 96/96 (100%)
 Frame = +1

Query: 232 SNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELSL 411
           +NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKKNPGWVEEL+L
Sbjct: 326 ANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTL 385

Query: 412 MVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWV 519
           MVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDW+
Sbjct: 386 MVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 421



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 43/44 (97%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATR 134
           QSDALFILLVEKDAAYMRLAEDRFYNRFPCII+TAKGQPDVATR
Sbjct: 240 QSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR 283